FFCP PHASE1:Hg19::chr5:168727931..168727932,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6586 | |EntrezGene=6586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11087 | |HGNC=11087 | ||
|TSSclassifier=strong | |||
|UniProt=O75094 | |UniProt=O75094 | ||
|association_with_transcript=-145bp_to_ENST00000332966_5end | |association_with_transcript=-145bp_to_ENST00000332966_5end | ||
|cluster_id=chr5:168727931..168727932,- | |||
|description=CAGE_peak_13_at_SLIT3_5end | |description=CAGE_peak_13_at_SLIT3_5end | ||
|id=chr5:168727931..168727932,- | |id=chr5:168727931..168727932,- | ||
|ontology_enrichment_celltype=CL:0002620!2.26e-16!23;CL:0000057!4.41e-16!75;CL:0000055!1.06e-12!180 | |ontology_enrichment_celltype=CL:0002620!2.26e-16!23;CL:0000057!4.41e-16!75;CL:0000055!1.06e-12!180 | ||
|ontology_enrichment_celltype_v019=CL:0000214;1.61e-16;3!CL:0002616;5.06e-13;1!CL:0000327;1.42e-07;15!CL:0000650;3.81e-07;2!CL:1000500;3.81e-07;2!CL:1000618;3.81e-07;2!CL:1001318;3.81e-07;2!CL:0002097;3.81e-07;2!CL:0002173;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.08e-16,3;CL:0002616,2.62e-13,1;CL:0000327,1.28e-07,15;CL:0002097,4.69e-07,2;CL:0000650,5.60e-07,2;CL:1000500,5.60e-07,2;CL:1000618,5.60e-07,2;CL:1001318,5.60e-07,2;CL:0002173,5.60e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!6.95e-11!45;UBERON:0002416!6.95e-11!45;UBERON:0002097!1.67e-10!40;UBERON:0003102!3.37e-07!95 | |ontology_enrichment_uberon=UBERON:0002199!6.95e-11!45;UBERON:0002416!6.95e-11!45;UBERON:0002097!1.67e-10!40;UBERON:0003102!3.37e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.61e-16;3!UBERON:0007616;1.61e-16;3!UBERON:0002217;1.61e-16;3!UBERON:0002018;1.61e-16;3!UBERON:0000996;5.06e-13;1!UBERON:0003567;3.81e-07;2!UBERON:0003838;3.81e-07;2!UBERON:0003586;3.81e-07;2!UBERON:0005169;3.81e-07;2!UBERON:0002321;3.81e-07;2!UBERON:0005406;3.81e-07;2!UBERON:0005215;3.81e-07;2!UBERON:0002303;3.81e-07;2!UBERON:0002319;3.81e-07;2!UBERON:0004905;9.37e-07;8!UBERON:0000982;9.37e-07;8!UBERON:0004770;9.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.08e-16,3;UBERON:0007616,1.08e-16,3;UBERON:0002217,1.08e-16,3;UBERON:0002018,1.08e-16,3;UBERON:0000996,2.32e-13,1;UBERON:0005406,2.74e-07,2;UBERON:0003567,5.60e-07,2;UBERON:0003838,5.60e-07,2;UBERON:0003586,5.60e-07,2;UBERON:0005169,5.60e-07,2;UBERON:0002321,5.60e-07,2;UBERON:0005215,5.60e-07,2;UBERON:0002303,5.60e-07,2;UBERON:0002319,5.60e-07,2;UBERON:0004905,8.12e-07,8;UBERON:0000982,8.12e-07,8;UBERON:0004770,8.12e-07,8 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0.783556884599516,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,3.44203944898576,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0.70296429550139,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,1.06778694409284,0.211931901159562,0,0.309157587715317,0.515281080091258,0.930584281657949,1.0126579934476,0.292311015483596,0.252433774244115,0.736399189138395,1.13152239773168,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,2.1100756394171,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0.561320188866147,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,4.75530963519025,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0,0,0,0.143411352204052,0,0,0,1.26664581178598,1.31717957183961,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,1.07220795687463,0.521988583930423,0,0.231522474323834,0,0,1.23520578864389,0,0,0.964570191354574,0.337884881306145,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0.470958557103084,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0.5290268405154,0.371995018166751,0,0.865253124247578,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.190941474834495,0.404234377916439,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.977931553462932,0,1.99727032255654,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0.783556884599516,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,3.44203944898576,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0.70296429550139,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,1.06778694409284,0.211931901159562,0,0.309157587715317,0.515281080091258,0.930584281657949,1.0126579934476,0.292311015483596,0.252433774244115,0.736399189138395,1.13152239773168,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,2.1100756394171,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0.561320188866147,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,4.75530963519025,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0,0,0,0.143411352204052,0,0,0,1.26664581178598,1.31717957183961,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,1.07220795687463,0.521988583930423,0,0.231522474323834,0,0,1.23520578864389,0,0,0.964570191354574,0.337884881306145,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0.470958557103084,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0.5290268405154,0.371995018166751,0,0.865253124247578,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.190941474834495,0.404234377916439,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.977931553462932,0,1.99727032255654,0.402547587182052,0 | ||
|short_description=p13@SLIT3 | |short_description=p13@SLIT3 | ||
}} | }} |
Latest revision as of 20:30, 16 September 2015
Short description: | p13@SLIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SLIT3_5end |
Coexpression cluster: | NA |
Association with transcript: | -145bp_to_ENST00000332966_5end |
EntrezGene: | SLIT3 |
HGNC: | 11087 |
UniProt: | O75094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.08e-16 | 3 |
perirenal adipocyte cell | 2.62e-13 | 1 |
extracellular matrix secreting cell | 1.28e-07 | 15 |
cortical cell of adrenal gland | 4.69e-07 | 2 |
mesangial cell | 5.60e-07 | 2 |
kidney interstitial cell | 5.60e-07 | 2 |
juxtaglomerular complex cell | 5.60e-07 | 2 |
renal interstitial pericyte | 5.60e-07 | 2 |
extraglomerular mesangial cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.08e-16 | 3 |
layer of synovial tissue | 1.08e-16 | 3 |
synovial joint | 1.08e-16 | 3 |
synovial membrane of synovial joint | 1.08e-16 | 3 |
vagina | 2.32e-13 | 1 |
perirenal fat | 2.74e-07 | 2 |
abdomen connective tissue | 5.60e-07 | 2 |
abdominal segment connective tissue | 5.60e-07 | 2 |
trunk connective tissue | 5.60e-07 | 2 |
interstitial tissue | 5.60e-07 | 2 |
extraglomerular mesangium | 5.60e-07 | 2 |
kidney interstitium | 5.60e-07 | 2 |
juxtaglomerular apparatus | 5.60e-07 | 2 |
mesangium | 5.60e-07 | 2 |
articulation | 8.12e-07 | 8 |
skeletal joint | 8.12e-07 | 8 |
articular system | 8.12e-07 | 8 |