FFCP PHASE1:Hg19::chr16:29675137..29675153,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:29675137..29675153,+
|short_description=p7@SPN
|description=CAGE_peak_7_at_SPN_5end
|association_with_transcript=87bp_to_AB464706,DQ892262,DQ895464_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6693 | |EntrezGene=6693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11249 | |HGNC=11249 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=87bp_to_AB464706,DQ892262,DQ895464_5end | |||
|cluster_id=chr16:29675137..29675153,+ | |||
|description=CAGE_peak_7_at_SPN_5end | |||
|id=chr16:29675137..29675153,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.01e-77!172;CL:0000566!3.01e-77!172;CL:0002032!5.23e-73!165;CL:0000837!5.23e-73!165;CL:0000988!5.12e-71!182;CL:0000763!4.15e-55!112;CL:0000049!4.15e-55!112;CL:0000738!1.14e-49!140;CL:0002031!5.58e-49!124;CL:0002087!4.47e-47!119;CL:0000839!1.19e-33!70;CL:0000557!3.71e-31!71;CL:0000766!1.13e-30!76;CL:0002009!4.39e-29!65;CL:0002194!8.22e-29!63;CL:0000576!8.22e-29!63;CL:0000040!8.22e-29!63;CL:0000559!8.22e-29!63;CL:0002057!2.87e-22!42;CL:0000860!4.41e-20!45;CL:0000134!4.47e-19!358;CL:0002320!4.31e-18!365;CL:0000219!1.18e-15!390;CL:0000542!4.71e-15!53;CL:0000051!4.71e-15!53;CL:0000838!1.69e-14!52;CL:0000084!3.61e-13!25;CL:0000827!3.61e-13!25;CL:0000034!1.02e-10!444;CL:0000048!1.04e-10!430;CL:0000791!2.17e-10!18;CL:0000789!2.17e-10!18;CL:0002420!2.17e-10!18;CL:0002419!2.17e-10!18;CL:0000790!2.17e-10!18;CL:0000723!3.65e-10!436;CL:0002393!8.77e-08!9;CL:0002397!8.77e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000840;6.06e-07;5!CL:0000235;6.51e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.79e-23,168;CL:0000988,1.47e-21,177;CL:0002032,3.28e-21,161;CL:0000837,3.28e-21,161;CL:0000763,2.89e-17,108;CL:0000049,2.89e-17,108;CL:0002031,2.55e-12,120;CL:0002087,8.83e-12,115;CL:0000738,1.67e-11,136;CL:0000839,6.78e-09,66;CL:0000557,1.82e-07,67;CL:0002194,2.11e-07,59;CL:0000576,2.11e-07,59;CL:0000040,2.11e-07,59;CL:0000559,2.11e-07,59;CL:0002009,4.36e-07,61;CL:0000840,4.88e-07,5;CL:0001029,4.88e-07,5;CL:0000235,8.07e-07,6;CL:0000134,8.87e-07,354;CL:0000766,8.97e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000049;7.55e-07;108 | |||
|ontology_enrichment_disease=DOID:1240!5.09e-32!39;DOID:2531!1.20e-31!51;DOID:0060083!1.20e-31!51;DOID:8692!3.56e-27!31;DOID:1036!2.00e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.23e-16;31!DOID:1240;6.24e-12;39!DOID:2531;1.16e-09;51!DOID:0060083;1.16e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.38e-16,31;DOID:1240,1.15e-14,39;DOID:2531,1.74e-12,51;DOID:0060083,1.74e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.22e-34!102;UBERON:0003061!1.22e-34!102;UBERON:0002193!1.01e-30!112;UBERON:0002371!3.15e-28!80;UBERON:0001474!4.20e-25!86;UBERON:0002405!6.60e-21!115;UBERON:0004765!5.45e-19!101;UBERON:0001434!5.45e-19!101;UBERON:0002384!9.30e-17!375;UBERON:0003081!1.17e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.77e-08,98;UBERON:0003061,3.77e-08,98;UBERON:0002193,4.58e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,0.656804715599566,1.10195093839151,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0.647787332037959,0,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0.236482229888585,0.344745680736619,0.645484683583826,0,0.564727018627814,0,0,0.612167784741805,0.641858054152187,0.639337125799041,0.659702600373432,0.199463657621632,1.70489900213078,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,1.81619850790011,0.368277635987565,0,1.26753171787165,1.4882300997553,0.209658645508376,0.336985893439485,0.750884464207532,0.32145117339416,0.570025487482497,1.9891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,3.14408610199332,1.02800749499755,0.668745981562712,0,0,1.94826728407911,1.00269411196656,0.294605907474837,0.886135578334485,0.812411591295047,1.40900451698243,1.43065282315866,1.47994114143309,1.38175008892924,0.869409257205157,0.444859689486181,0,2.09071047609954,1.47302145506836,0.383220493601921,0.34362744548263,1.26509846009751,0.318565414324097,0.651083453856419,0,0,0.255973222308837,1.24930726552346,0.947109008176067,0,0.201606743224732,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,2.96020553408754,5.7171923023112,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.594524649154913,0,0,0,0,0,0,1.97065295158377,0.528290604079356,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.448340575974109,0.591092280605782,2.37190332345469,1.66845947163673,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.50999940573032,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.0457418040996,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0,0.411362273086194,0,0,3.17250070517708,0,0,0,0.185803175125719,0.28853842595289,0.213425530045242,0.159426272728822,2.59453182862662,0.191505370132367,0.846694330895531,0,3.93116049358842,0.456469358066384,1.56679895773023,0,1.01575066680962,2.08764497634809,0.403599414382095,0.425846237690326,1.03051603426729,0.307240764308458,0.671028323677248,1.16794399198336,1.17232857241224,1.67043704337145,0,0.540911356951966,1.99843180798692,1.4098700508785,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02314474045374,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10966490978682,0.784901281975124,0.831058409500782,0.902382642468723,0.588187602953219,0.503464760927528,0.189753732724185,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.79994958341972,1.8137594048004,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.588925401344836,0,0.4226557275834,0,0,0.0644578879735772,0.799529247399431,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.387533459016037,0.434523000071005,0,0,0,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,1.60284246151616 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| ||
|short_description=p7@SPN | |||
}} | }} |
Latest revision as of 03:02, 16 September 2015
Short description: | p7@SPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPN_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_AB464706, DQ892262, DQ895464_5end |
EntrezGene: | SPN |
HGNC: | 11249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.79e-23 | 168 |
hematopoietic cell | 1.47e-21 | 177 |
hematopoietic oligopotent progenitor cell | 3.28e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.28e-21 | 161 |
myeloid cell | 2.89e-17 | 108 |
common myeloid progenitor | 2.89e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 2.55e-12 | 120 |
nongranular leukocyte | 8.83e-12 | 115 |
leukocyte | 1.67e-11 | 136 |
myeloid lineage restricted progenitor cell | 6.78e-09 | 66 |
granulocyte monocyte progenitor cell | 1.82e-07 | 67 |
monopoietic cell | 2.11e-07 | 59 |
monocyte | 2.11e-07 | 59 |
monoblast | 2.11e-07 | 59 |
promonocyte | 2.11e-07 | 59 |
macrophage dendritic cell progenitor | 4.36e-07 | 61 |
immature conventional dendritic cell | 4.88e-07 | 5 |
common dendritic progenitor | 4.88e-07 | 5 |
macrophage | 8.07e-07 | 6 |
mesenchymal cell | 8.87e-07 | 354 |
myeloid leukocyte | 8.97e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.77e-08 | 98 |
blood island | 3.77e-08 | 98 |
hemolymphoid system | 4.58e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.38e-16 | 31 |
leukemia | 1.15e-14 | 39 |
hematologic cancer | 1.74e-12 | 51 |
immune system cancer | 1.74e-12 | 51 |