FFCP PHASE1:Hg19::chr5:150632678..150632707,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=P17900 | |UniProt=P17900 | ||
|association_with_transcript=65bp_to_NM_000405,NM_001167607,uc003ltr.3,uc011dcr.1,uc011dcs.1_5end | |association_with_transcript=65bp_to_NM_000405,NM_001167607,uc003ltr.3,uc011dcr.1,uc011dcs.1_5end | ||
|cluster_id=chr5:150632678..150632707,+ | |||
|coexpression_cluster_id=C2815 | |||
|description=CAGE_peak_3_at_GM2A_5end | |description=CAGE_peak_3_at_GM2A_5end | ||
|id=chr5:150632678..150632707,+ | |id=chr5:150632678..150632707,+ | ||
|ontology_enrichment_celltype=CL:0000766!7.65e-13!76;CL:0000557!1.66e-12!71;CL:0000839!4.34e-12!70;CL:0002194!4.36e-11!63;CL:0000576!4.36e-11!63;CL:0000040!4.36e-11!63;CL:0000559!4.36e-11!63;CL:0002009!1.02e-10!65;CL:0002057!5.26e-08!42 | |ontology_enrichment_celltype=CL:0000766!7.65e-13!76;CL:0000557!1.66e-12!71;CL:0000839!4.34e-12!70;CL:0002194!4.36e-11!63;CL:0000576!4.36e-11!63;CL:0000040!4.36e-11!63;CL:0000559!4.36e-11!63;CL:0002009!1.02e-10!65;CL:0002057!5.26e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.91e-09;39!CL:0000234;1.91e-09;39!CL:0000860;1.02e-07;33!CL:0002057;1.02e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.88e-15,72;CL:0000557,1.31e-14,67;CL:0000839,3.76e-14,66;CL:0002194,3.47e-13,59;CL:0000576,3.47e-13,59;CL:0000040,3.47e-13,59;CL:0000559,3.47e-13,59;CL:0002009,1.01e-12,61;CL:0000473,4.28e-11,48;CL:0000234,4.28e-11,48;CL:0000860,5.26e-08,42;CL:0002057,5.26e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!3.64e-17!626;UBERON:0000467!3.85e-17!625;UBERON:0000062!7.53e-17!511;UBERON:0000468!4.63e-16!659;UBERON:0001049!3.47e-14!57;UBERON:0005068!3.47e-14!57;UBERON:0006241!3.47e-14!57;UBERON:0007135!3.47e-14!57;UBERON:0007023!1.48e-13!115;UBERON:0002371!8.30e-13!80;UBERON:0003075!8.45e-13!86;UBERON:0007284!8.45e-13!86;UBERON:0002616!9.80e-13!59;UBERON:0001474!3.31e-12!86;UBERON:0000923!3.97e-12!604;UBERON:0005291!3.97e-12!604;UBERON:0006598!3.97e-12!604;UBERON:0002532!3.97e-12!604;UBERON:0002050!4.05e-12!605;UBERON:0005423!4.05e-12!605;UBERON:0005743!4.99e-12!86;UBERON:0001017!1.76e-11!82;UBERON:0000922!2.42e-11!612;UBERON:0004765!2.93e-11!101;UBERON:0001434!2.93e-11!101;UBERON:0000955!4.50e-11!69;UBERON:0006238!4.50e-11!69;UBERON:0002346!1.36e-10!90;UBERON:0002780!3.92e-10!41;UBERON:0001890!3.92e-10!41;UBERON:0006240!3.92e-10!41;UBERON:0000073!6.51e-10!94;UBERON:0001016!6.51e-10!94;UBERON:0002405!1.25e-09!115;UBERON:0003080!1.49e-09!42;UBERON:0001893!2.41e-09!34;UBERON:0002020!3.77e-09!34;UBERON:0003528!3.77e-09!34;UBERON:0004121!4.27e-09!169;UBERON:0000033!4.41e-09!123;UBERON:0002791!7.28e-09!33;UBERON:0002204!1.28e-08!167;UBERON:0003056!2.23e-08!61;UBERON:0001869!2.80e-08!32;UBERON:0000924!7.70e-08!173;UBERON:0006601!7.70e-08!173;UBERON:0002193!8.90e-08!112;UBERON:0000479!8.98e-08!787;UBERON:0000153!9.45e-08!129;UBERON:0007811!9.45e-08!129;UBERON:0003081!7.53e-07!216 | |ontology_enrichment_uberon=UBERON:0000480!3.64e-17!626;UBERON:0000467!3.85e-17!625;UBERON:0000062!7.53e-17!511;UBERON:0000468!4.63e-16!659;UBERON:0001049!3.47e-14!57;UBERON:0005068!3.47e-14!57;UBERON:0006241!3.47e-14!57;UBERON:0007135!3.47e-14!57;UBERON:0007023!1.48e-13!115;UBERON:0002371!8.30e-13!80;UBERON:0003075!8.45e-13!86;UBERON:0007284!8.45e-13!86;UBERON:0002616!9.80e-13!59;UBERON:0001474!3.31e-12!86;UBERON:0000923!3.97e-12!604;UBERON:0005291!3.97e-12!604;UBERON:0006598!3.97e-12!604;UBERON:0002532!3.97e-12!604;UBERON:0002050!4.05e-12!605;UBERON:0005423!4.05e-12!605;UBERON:0005743!4.99e-12!86;UBERON:0001017!1.76e-11!82;UBERON:0000922!2.42e-11!612;UBERON:0004765!2.93e-11!101;UBERON:0001434!2.93e-11!101;UBERON:0000955!4.50e-11!69;UBERON:0006238!4.50e-11!69;UBERON:0002346!1.36e-10!90;UBERON:0002780!3.92e-10!41;UBERON:0001890!3.92e-10!41;UBERON:0006240!3.92e-10!41;UBERON:0000073!6.51e-10!94;UBERON:0001016!6.51e-10!94;UBERON:0002405!1.25e-09!115;UBERON:0003080!1.49e-09!42;UBERON:0001893!2.41e-09!34;UBERON:0002020!3.77e-09!34;UBERON:0003528!3.77e-09!34;UBERON:0004121!4.27e-09!169;UBERON:0000033!4.41e-09!123;UBERON:0002791!7.28e-09!33;UBERON:0002204!1.28e-08!167;UBERON:0003056!2.23e-08!61;UBERON:0001869!2.80e-08!32;UBERON:0000924!7.70e-08!173;UBERON:0006601!7.70e-08!173;UBERON:0002193!8.90e-08!112;UBERON:0000479!8.98e-08!787;UBERON:0000153!9.45e-08!129;UBERON:0007811!9.45e-08!129;UBERON:0003081!7.53e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.97e-08;34!UBERON:0000073;2.99e-08;53!UBERON:0002616;2.99e-08;53!UBERON:0003528;6.98e-08;34!UBERON:0002020;6.98e-08;34!UBERON:0002791;1.29e-07;32!UBERON:0002780;1.51e-07;41!UBERON:0001890;1.51e-07;41!UBERON:0001869;1.55e-07;32 | |||
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| ||
|short_description=p3@GM2A | |short_description=p3@GM2A | ||
}} | }} |
Latest revision as of 08:35, 16 September 2015
Short description: | p3@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GM2A_5end |
Coexpression cluster: | C2815_Monocytederived_CD14_Mast_corpus_Macrophage_Dendritic_optic |
Association with transcript: | 65bp_to_NM_000405, NM_001167607, uc003ltr.3, uc011dcr.1, uc011dcs.1_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | P17900 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.88e-15 | 72 |
granulocyte monocyte progenitor cell | 1.31e-14 | 67 |
myeloid lineage restricted progenitor cell | 3.76e-14 | 66 |
monopoietic cell | 3.47e-13 | 59 |
monocyte | 3.47e-13 | 59 |
monoblast | 3.47e-13 | 59 |
promonocyte | 3.47e-13 | 59 |
macrophage dendritic cell progenitor | 1.01e-12 | 61 |
defensive cell | 4.28e-11 | 48 |
phagocyte | 4.28e-11 | 48 |
classical monocyte | 5.26e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.26e-08 | 42 |