FFCP PHASE1:Hg19::chrX:16893387..16893402,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10199 | |HGNC=10199 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000410804_5end | |association_with_transcript=0bp_to_ENST00000410804_5end | ||
|cluster_id=chrX:16893387..16893402,- | |||
|coexpression_cluster_id=C2188 | |||
|description=CAGE_peak_1_at_RNU4-6P_5end | |description=CAGE_peak_1_at_RNU4-6P_5end | ||
|id=chrX:16893387..16893402,- | |id=chrX:16893387..16893402,- | ||
|ontology_enrichment_celltype=CL:0000860!1.42e-15!45;CL:0002057!1.10e-14!42;CL:0002087!8.23e-12!119;CL:0000037!1.87e-11!172;CL:0000566!1.87e-11!172;CL:0002031!4.89e-11!124;CL:0002032!5.82e-11!165;CL:0000837!5.82e-11!165;CL:0000738!1.26e-10!140;CL:0000988!5.43e-10!182;CL:0002009!1.22e-09!65;CL:0002194!1.72e-09!63;CL:0000576!1.72e-09!63;CL:0000040!1.72e-09!63;CL:0000559!1.72e-09!63;CL:0000766!8.04e-09!76;CL:0000557!2.58e-08!71;CL:0000839!2.80e-08!70;CL:0000763!3.38e-08!112;CL:0000049!3.38e-08!112 | |ontology_enrichment_celltype=CL:0000860!1.42e-15!45;CL:0002057!1.10e-14!42;CL:0002087!8.23e-12!119;CL:0000037!1.87e-11!172;CL:0000566!1.87e-11!172;CL:0002031!4.89e-11!124;CL:0002032!5.82e-11!165;CL:0000837!5.82e-11!165;CL:0000738!1.26e-10!140;CL:0000988!5.43e-10!182;CL:0002009!1.22e-09!65;CL:0002194!1.72e-09!63;CL:0000576!1.72e-09!63;CL:0000040!1.72e-09!63;CL:0000559!1.72e-09!63;CL:0000766!8.04e-09!76;CL:0000557!2.58e-08!71;CL:0000839!2.80e-08!70;CL:0000763!3.38e-08!112;CL:0000049!3.38e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.80e-19;33!CL:0002057;4.80e-19;33!CL:0000473;2.24e-16;39!CL:0000234;2.24e-16;39!CL:0000576;3.32e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-19,42;CL:0002057,1.38e-19,42;CL:0000473,5.86e-19,48;CL:0000234,5.86e-19,48;CL:0002009,4.29e-14,61;CL:0002194,1.82e-13,59;CL:0000576,1.82e-13,59;CL:0000040,1.82e-13,59;CL:0000559,1.82e-13,59;CL:0000557,4.20e-12,67;CL:0002087,1.80e-11,115;CL:0000839,3.23e-11,66;CL:0002031,9.49e-11,120;CL:0000766,1.23e-10,72;CL:0000738,4.08e-10,136;CL:0000037,2.65e-08,168;CL:0002032,1.44e-07,161;CL:0000837,1.44e-07,161;CL:0000988,2.61e-07,177;CL:0000763,4.43e-07,108;CL:0000049,4.43e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;8.67e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.07e-10!57;UBERON:0005068!5.07e-10!57;UBERON:0006241!5.07e-10!57;UBERON:0007135!5.07e-10!57;UBERON:0003080!5.55e-09!42;UBERON:0002020!1.09e-08!34;UBERON:0003528!1.09e-08!34;UBERON:0002780!1.69e-08!41;UBERON:0001890!1.69e-08!41;UBERON:0006240!1.69e-08!41;UBERON:0002616!2.61e-08!59;UBERON:0002371!1.39e-07!80;UBERON:0002791!3.14e-07!33;UBERON:0001893!9.02e-07!34 | |ontology_enrichment_uberon=UBERON:0001049!5.07e-10!57;UBERON:0005068!5.07e-10!57;UBERON:0006241!5.07e-10!57;UBERON:0007135!5.07e-10!57;UBERON:0003080!5.55e-09!42;UBERON:0002020!1.09e-08!34;UBERON:0003528!1.09e-08!34;UBERON:0002780!1.69e-08!41;UBERON:0001890!1.69e-08!41;UBERON:0006240!1.69e-08!41;UBERON:0002616!2.61e-08!59;UBERON:0002371!1.39e-07!80;UBERON:0002791!3.14e-07!33;UBERON:0001893!9.02e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.49e-15;34!UBERON:0002020;2.49e-15;34!UBERON:0002791;4.01e-15;32!UBERON:0002780;4.78e-15;41!UBERON:0001890;4.78e-15;41!UBERON:0002619;9.86e-15;22!UBERON:0000073;6.25e-14;53!UBERON:0002616;6.25e-14;53!UBERON:0001869;9.67e-14;32!UBERON:0001893;1.17e-12;34!UBERON:0000956;1.72e-12;25!UBERON:0000203;1.72e-12;25!UBERON:0001950;1.82e-12;20!UBERON:0002420;7.25e-09;9!UBERON:0007245;7.25e-09;9!UBERON:0010009;7.25e-09;9!UBERON:0010011;7.25e-09;9!UBERON:0000454;7.25e-09;9!UBERON:0000125;2.16e-08;9!UBERON:0002308;2.16e-08;9!UBERON:0000955;2.28e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.73e-22,56;UBERON:0005068,1.73e-22,56;UBERON:0006241,1.73e-22,56;UBERON:0007135,1.73e-22,56;UBERON:0000073,1.78e-22,53;UBERON:0002616,1.78e-22,53;UBERON:0002780,2.26e-20,41;UBERON:0001890,2.26e-20,41;UBERON:0003080,2.26e-20,41;UBERON:0006240,2.26e-20,41;UBERON:0003528,3.04e-19,34;UBERON:0002020,3.04e-19,34;UBERON:0002791,3.65e-17,32;UBERON:0002346,2.21e-16,86;UBERON:0001893,8.30e-16,34;UBERON:0003075,1.70e-15,82;UBERON:0007284,1.70e-15,82;UBERON:0001869,2.43e-15,32;UBERON:0000955,4.65e-15,68;UBERON:0006238,4.65e-15,68;UBERON:0002619,5.87e-15,22;UBERON:0001017,2.27e-14,81;UBERON:0003056,1.74e-13,61;UBERON:0001016,4.72e-13,89;UBERON:0000956,1.10e-12,25;UBERON:0000203,1.10e-12,25;UBERON:0001950,1.23e-12,20;UBERON:0007023,5.56e-11,114;UBERON:0010371,7.38e-11,104;UBERON:0002371,1.23e-10,76;UBERON:0010314,3.14e-10,132;UBERON:0001474,2.80e-09,82;UBERON:0002420,5.80e-09,9;UBERON:0007245,5.80e-09,9;UBERON:0010009,5.80e-09,9;UBERON:0010011,5.80e-09,9;UBERON:0000454,5.80e-09,9;UBERON:0000125,2.48e-08,9;UBERON:0002308,2.48e-08,9;UBERON:0002390,7.03e-08,98;UBERON:0003061,7.03e-08,98;UBERON:0004765,8.89e-08,90;UBERON:0002405,2.73e-07,93;UBERON:0001434,7.71e-07,100 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,5.06599756336621,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,2.01697543935533,0,0,1.46379839637152,0,0.408001382488506,0.626909442956176,0,0.136874425072884,0.251085279189606,0.764134057479513,0.985207073399349,1.02324015707783,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0.369754010166788,0,0,2.05520307534393,0.553995408531877,1.40381113229099,0.651032612147555,0,0,0,3.48955773070955,1.13362783106643,4.60909716256851,6.27558399645349,3.28934310417461,2.78735733805593,6.04154023876516,7.42866048934392,0.47296445977717,3.10271112662957,1.29096936716765,0,2.82363509313907,1.63743690034707,0,2.75475503133812,0.320929027076094,5.11469700639233,4.28806690242731,1.39624560335142,3.83602275479425,2.90209238628584,2.8369261234557,6.85104473895132,2.76373531782418,4.69334626578181,0,0.605399502633369,0,1.58231193720442,0,0.637812899895131,1.46761051855863,0.112328631146495,0.150176892841506,0,2.28010194992999,0.39783335439818,0.365328307529268,1.75996244461323,1.09227722252426,1.77901850772711,1.28019066769952,1.60158394814405,0,0,1.90810750907073,0,1.17447437874188,1.52909291250092,0,0,0.790152254325231,0,1.96505381374582,0.616804496998528,0.167186495390678,1.30368906653436,2.36723902867367,1.94826728407911,0.222820913770347,1.47302953737419,0.664601683750863,0,2.68991771423918,3.25148368899696,4.60426132890293,4.14525026678773,0,0.444859689486181,1.60524496853828,2.09071047609954,0.226618685395132,0.766440987203842,1.37450978193052,0.253019692019503,0.637130828648193,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0.821127996921047,0,0.267440195783507,0.434473211648397,2.43806866313962,0,0,0,0,0.289693037921647,0,0,0,0.443458794925128,0,0,0,0,0,0,0.26591592103773,0.238490624305342,1.14398982156026,0,0,0.860234595106124,0,0,1.67799774483962,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0.717558542755448,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0.504641701751257,0,1.56449532329816,0,0,0,0,0.473227200159376,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.951270761172991,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,1.00451418286425,0,0,0,1.42636905040718,0,0,0,0,0,0.646882724578552,0.898401253958239,0.254094624222463,0,0.773288812777695,0,8.93114252314428,0,2.99161459204025,0.414415513436035,0,0,0,0.623912584592421,0.356857977594324,0.630809660135739,0.702848489956279,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0,0,0.343143423810856,0,1.07857100409308,0.74709290462411,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.464841513839837,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.460511024178389,0,0,0.290033387828457,0,0,0,0.192190067365106,0,0,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0,0,0,0.42793898803392,0,1.56989728039846,0,0,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,2.62357900818653,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.844430541190656,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0.423347165447766,1.29848776109822,0.280797178113459,0.228234679033192,0.626719583092093,12.5317238545034,1.52362600021443,0,0.201799707191048,0.851692475380653,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0,0.568272293612826,0.47748896947538,0,0,3.97659059106519,5.76744607283102,0,0.824019371133798,0.844501632511974,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0.7812832832557,0,2.17499872630438,0.568967241427498,1.01701460117107,0.236387681767936,1.03423011972439,0.874813840149763,0.347249989866585,0,3.0149109656352,1.52581736317083,2.32216445855572,0,0.219385397153973,0,0,0,0,0,0,0.217294743844016,0.31900115973192,0,0,0,0.627921025580099,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,1.83309043480088,0,0,0,0,2.40773294189637,1.1713222286267,0.547364367646998,0,0,0.394584402849391,0,1.22429104652196,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.483781656445426,0.438535902517113,0.821154570532092,0,0,2.71176888936639,0.411125773940253,0.397429223405979,0,0,0,0.213452994739353,0.39961921916426,0.288180834308212,0,0.686379991447858,0,0,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| ||
|short_description=p1@RNU4-6P | |short_description=p1@RNU4-6P | ||
}} | }} |
Latest revision as of 06:24, 20 September 2015
Short description: | p1@RNU4-6P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNU4-6P_5end |
Coexpression cluster: | C2188_acute_Neurons_CD14_immature_CD4_pituitary_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000410804_5end |
EntrezGene: | NA |
HGNC: | 10199 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-19 | 42 |
defensive cell | 5.86e-19 | 48 |
phagocyte | 5.86e-19 | 48 |
macrophage dendritic cell progenitor | 4.29e-14 | 61 |
monopoietic cell | 1.82e-13 | 59 |
monocyte | 1.82e-13 | 59 |
monoblast | 1.82e-13 | 59 |
promonocyte | 1.82e-13 | 59 |
granulocyte monocyte progenitor cell | 4.20e-12 | 67 |
nongranular leukocyte | 1.80e-11 | 115 |
myeloid lineage restricted progenitor cell | 3.23e-11 | 66 |
hematopoietic lineage restricted progenitor cell | 9.49e-11 | 120 |
myeloid leukocyte | 1.23e-10 | 72 |
leukocyte | 4.08e-10 | 136 |
hematopoietic stem cell | 2.65e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.44e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-07 | 161 |
hematopoietic cell | 2.61e-07 | 177 |
myeloid cell | 4.43e-07 | 108 |
common myeloid progenitor | 4.43e-07 | 108 |