FFCP PHASE1:Hg19::chr16:28303874..28303916,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:28303874..28303916,+
|short_description=p2@SBK1
|description=CAGE_peak_2_at_SBK1_5end
|association_with_transcript=34bp_to_ENST00000341901,NM_001024401,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388228 | |EntrezGene=388228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17699 | |HGNC=17699 | ||
|TSSclassifier=strong | |||
|UniProt=Q52WX2 | |UniProt=Q52WX2 | ||
|association_with_transcript=34bp_to_ENST00000341901,NM_001024401,uc002dpd.2_5end | |||
|cluster_id=chr16:28303874..28303916,+ | |||
|coexpression_cluster_id=C1760 | |||
|description=CAGE_peak_2_at_SBK1_5end | |||
|id=chr16:28303874..28303916,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.82e-13!18;CL:0000789!7.82e-13!18;CL:0002420!7.82e-13!18;CL:0002419!7.82e-13!18;CL:0000790!7.82e-13!18;CL:0000084!6.38e-11!25;CL:0000827!6.38e-11!25;CL:0000625!8.87e-10!11;CL:0000047!1.86e-07!8;CL:0002319!5.83e-07!25;CL:0000542!9.08e-07!53;CL:0000051!9.08e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.84e-18;18!CL:0000789;1.84e-18;18!CL:0002419;1.84e-18;18!CL:0000084;1.14e-14;25!CL:0000625;5.69e-14;11!CL:0000540;1.43e-08;6!CL:0000404;1.43e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.29e-18,18;CL:0000789,1.29e-18,18;CL:0002420,1.29e-18,18;CL:0002419,1.29e-18,18;CL:0000790,1.29e-18,18;CL:0000084,7.85e-15,25;CL:0000827,7.85e-15,25;CL:0000625,5.43e-14,11;CL:0000047,1.74e-10,8;CL:0000540,1.43e-08,6;CL:0000031,1.43e-08,6;CL:0000404,1.43e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.84e-18;18!CL:0000031;1.43e-08;6 | |||
|ontology_enrichment_disease=DOID:171!3.76e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;1.40e-07;6!DOID:171;3.21e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.49e-07,6;DOID:171,3.21e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.95e-28!94;UBERON:0001016!2.95e-28!94;UBERON:0005743!9.19e-28!86;UBERON:0001017!2.64e-27!82;UBERON:0001049!6.28e-23!57;UBERON:0005068!6.28e-23!57;UBERON:0006241!6.28e-23!57;UBERON:0007135!6.28e-23!57;UBERON:0000955!3.08e-20!69;UBERON:0006238!3.08e-20!69;UBERON:0002346!1.93e-19!90;UBERON:0002780!1.36e-18!41;UBERON:0001890!1.36e-18!41;UBERON:0006240!1.36e-18!41;UBERON:0002616!2.76e-18!59;UBERON:0003075!8.78e-18!86;UBERON:0007284!8.78e-18!86;UBERON:0003080!9.12e-18!42;UBERON:0002020!1.62e-16!34;UBERON:0003528!1.62e-16!34;UBERON:0001893!2.13e-16!34;UBERON:0007023!4.61e-16!115;UBERON:0001869!6.08e-16!32;UBERON:0002791!8.50e-16!33;UBERON:0000924!1.73e-15!173;UBERON:0006601!1.73e-15!173;UBERON:0003056!6.25e-15!61;UBERON:0000956!3.27e-14!25;UBERON:0000203!3.27e-14!25;UBERON:0004121!3.68e-14!169;UBERON:0000153!4.87e-14!129;UBERON:0007811!4.87e-14!129;UBERON:0001950!6.54e-14!20;UBERON:0002619!2.21e-13!22;UBERON:0000033!1.76e-12!123;UBERON:0000178!4.46e-09!15;UBERON:0000179!4.46e-09!15;UBERON:0000463!4.46e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.90e-20;20!UBERON:0002619;1.14e-19;22!UBERON:0001869;4.06e-19;32!UBERON:0003528;7.63e-19;34!UBERON:0002020;7.63e-19;34!UBERON:0002791;7.95e-19;32!UBERON:0000956;3.20e-18;25!UBERON:0000203;3.20e-18;25!UBERON:0001893;8.98e-18;34!UBERON:0002780;5.52e-16;41!UBERON:0001890;5.52e-16;41!UBERON:0000073;1.47e-14;53!UBERON:0002616;1.47e-14;53!UBERON:0000955;2.68e-11;68!UBERON:0001016;2.90e-11;83!UBERON:0001017;1.96e-10;75!UBERON:0000178;2.31e-09;15!UBERON:0000179;2.31e-09;15!UBERON:0000463;2.31e-09;15!UBERON:0001871;2.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.04e-30,89;UBERON:0001017,2.10e-28,81;UBERON:0000073,4.02e-24,53;UBERON:0002616,4.02e-24,53;UBERON:0001049,1.12e-23,56;UBERON:0005068,1.12e-23,56;UBERON:0006241,1.12e-23,56;UBERON:0007135,1.12e-23,56;UBERON:0003528,3.16e-22,34;UBERON:0002020,3.16e-22,34;UBERON:0001869,2.43e-21,32;UBERON:0000955,3.06e-21,68;UBERON:0006238,3.06e-21,68;UBERON:0002791,6.18e-21,32;UBERON:0001893,6.33e-21,34;UBERON:0002780,7.40e-21,41;UBERON:0001890,7.40e-21,41;UBERON:0003080,7.40e-21,41;UBERON:0006240,7.40e-21,41;UBERON:0001950,3.01e-20,20;UBERON:0002619,8.16e-20,22;UBERON:0000956,2.76e-18,25;UBERON:0000203,2.76e-18,25;UBERON:0002346,4.83e-17,86;UBERON:0003075,2.27e-16,82;UBERON:0007284,2.27e-16,82;UBERON:0003056,2.16e-15,61;UBERON:0004121,4.84e-14,171;UBERON:0000924,4.84e-14,171;UBERON:0006601,4.84e-14,171;UBERON:0010371,1.03e-12,104;UBERON:0007023,9.25e-12,114;UBERON:0011216,6.69e-11,223;UBERON:0000178,2.00e-09,15;UBERON:0000179,2.00e-09,15;UBERON:0000463,2.00e-09,15;UBERON:0001871,1.72e-07,6;UBERON:0000200,8.64e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0,0,0,0,0,0,0.730310090387373,0,0.492484232307152,0,0.626909442956176,0.85870796139317,0.684372125364421,2.00868223351684,0,0,0,2.75354993794233,8.82807615623589,6.34746105595912,0,0,0,0.154934401160603,0.142169232487422,0,4.9859586767869,2.80762226458198,4.12320654360118,0.223915474239924,1.6194683300949,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.764546456250458,0,0,0,2.55722701147983,3.93010762749165,2.46721798799411,2.84217042164153,1.30368906653436,1.89379122293893,3.89653456815823,0.779873198196215,1.47302953737419,3.54454231333794,2.70803863765016,1.92136979588513,1.1705341280389,0.657751618414705,0.829050053357545,0.869409257205157,4.44859689486181,2.67540828089713,3.1360657141493,3.96582699441482,1.91610246800961,2.40539211837841,5.56643322442906,5.73417745783374,8.46408490013344,7.60361635558699,12.0460095262218,15.1024201162214,2.49861453104692,11.6020853501568,4.92676798152628,15.5237192283044,12.5696892018248,11.2963035028583,0,0,0,0,0,0,0,0,0.567208902984407,0.221729397462564,0.87834785693126,1.0478326039817,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87894824518382,6.36142887943129,3.95059405756363,4.25010325563019,4.03713361401005,5.10968302706162,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,6.18048339180511,1.8448265781467,0,0,0,0,0.0925884451585296,0,0,1.44331342025273,3.36198174427723,0.117408694235822,0,0,0,3.1608175918371,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58672460779287,21.4763528620101,19.190854162497,15.6578504261293,2.28685161800217,23.4251736943719,15.4657762555539,16.7516265334349,13.3967137847164,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6165768359324,3.23571301227925,8.96511485548932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0.40101294060657,0.0920809889358963,0,0,0,0,0.462092022626489,2.35304930753057,0,0.211103257785751,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,1.96808787419823,0.976135183992909,0,1.83138929636687,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,3.55213326462519,3.82318603571188,5.69647187174163,5.95579438644473,3.70226045777575,1.29694662238543,3.7802200606668,9.51750211553125,3.41837027607914,0,0,0.557409525377156,0.28853842595289,2.70339004723974,3.66680427276291,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.485442086998054,0.111443384277478,0.284136146806413,0,0.296964680832639,0.307160702099232,1.9882952955326,2.81338832821025,0,0,5.91151142758382,0,0,1.76352923497993,0.409074730008619,0,0,0,0,0,0,2.3948309234694,0,1.93866549219044,1.66982576691332,43.9150355602627,0.520855522170466,11.1074199995169,0,0.455173793141999,1.01701460117107,0,4.82640722538051,0.874813840149763,5.72962483279864,0,3.37670028151142,4.5774520895125,7.85112745511695,4.43321428430321,2.19385397153973,0,0.697118721393016,0.230850775511391,0,0,0.897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.706765357169704,3.02944095638928,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.370691816839509,0.417687798021821,0.471807930864739,0,0.937057782901357,0,0,0,0,2.41981432097328,23.8736754071782,0.252746318513952,0,0.518440956986236,0.664653872707185,0,0.313932918407225,0,2.84609546029793,0.416024019039416,1.90915712168644,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.387956065953678,0.529536760149002,2.93774963014692,0,0,2.84898581801454,1.95551382734803,0.240476460754601,0.213452994739353,0,0.72045208577053,1.37443915399099,0,0,0,0.471388069233591,0.407712618220842,0.523014231561666,0,0,1.20084057741958,1.36905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.268733889946905,0,1.16495949527454,0,0.164831716762333,0.202210631562555,0.0984274815147488,0,0,3.13267834056624,6.59087908706579,4.53880140770872,6.23160507043778,0,0,3.21972650287531,0,0.472834243795189,2.57027481861491,0.211200673038813,0,0,0,0,1.5256112259285,0,0,0,0,0,0,0.113312091520126,0,0,2.19781025814636,1.71902382265497,0.171086837884329,9.86741031243341,0.106787412567695,0.943225830597996,0,1.48849806543585,0,0.121792598380896,0,0,0.2506898940227,0,0,3.61224421375539,1.77213635993397,3.17268288745104,4.38168257472749,0.573409195690071,1.66393577305278,2.049181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| ||
|short_description=p2@SBK1 | |||
}} | }} |
Latest revision as of 23:43, 15 September 2015
Short description: | p2@SBK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SBK1_5end |
Coexpression cluster: | C1760_brain_occipital_temporal_duodenum_parietal_medulloblastoma_myeloma |
Association with transcript: | 34bp_to_ENST00000341901, NM_001024401, uc002dpd.2_5end |
EntrezGene: | SBK1 |
HGNC: | 17699 |
UniProt: | Q52WX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.29e-18 | 18 |
alpha-beta T cell | 1.29e-18 | 18 |
immature T cell | 1.29e-18 | 18 |
mature T cell | 1.29e-18 | 18 |
immature alpha-beta T cell | 1.29e-18 | 18 |
T cell | 7.85e-15 | 25 |
pro-T cell | 7.85e-15 | 25 |
CD8-positive, alpha-beta T cell | 5.43e-14 | 11 |
neuronal stem cell | 1.74e-10 | 8 |
neuron | 1.43e-08 | 6 |
neuroblast | 1.43e-08 | 6 |
electrically signaling cell | 1.43e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.49e-07 | 6 |
neuroectodermal tumor | 3.21e-07 | 10 |