FFCP PHASE1:Hg19::chr5:141348755..141348781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9604 | |EntrezGene=9604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10058 | |HGNC=10058 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBS8 | |UniProt=Q9UBS8 | ||
|association_with_transcript=22bp_to_ENST00000394519,uc003lmd.2_5end | |association_with_transcript=22bp_to_ENST00000394519,uc003lmd.2_5end | ||
|cluster_id=chr5:141348755..141348781,+ | |||
|description=CAGE_peak_3_at_RNF14_5end | |description=CAGE_peak_3_at_RNF14_5end | ||
|id=chr5:141348755..141348781,+ | |id=chr5:141348755..141348781,+ | ||
|ontology_enrichment_celltype=CL:0000134!5.70e-17!358;CL:0000048!1.62e-16!430;CL:0002320!2.67e-16!365;CL:0000723!1.55e-15!436;CL:0000034!7.18e-14!444;CL:0000219!8.17e-14!390;CL:0002371!1.45e-12!591;CL:0000144!1.65e-10!625;CL:0000003!1.86e-10!722;CL:0000839!2.19e-09!70;CL:0002031!6.24e-09!124;CL:0000988!7.95e-09!182;CL:0002032!8.30e-09!165;CL:0000837!8.30e-09!165;CL:0000063!1.17e-08!578;CL:0000037!1.27e-08!172;CL:0000566!1.27e-08!172;CL:0000763!4.57e-08!112;CL:0000049!4.57e-08!112;CL:0000557!9.25e-08!71;CL:0000738!1.69e-07!140;CL:0000548!2.12e-07!679;CL:0000004!2.12e-07!679;CL:0000255!2.12e-07!679;CL:0000012!2.81e-07!682;CL:0002194!7.76e-07!63;CL:0000576!7.76e-07!63;CL:0000040!7.76e-07!63;CL:0000559!7.76e-07!63;CL:0000766!9.30e-07!76 | |ontology_enrichment_celltype=CL:0000134!5.70e-17!358;CL:0000048!1.62e-16!430;CL:0002320!2.67e-16!365;CL:0000723!1.55e-15!436;CL:0000034!7.18e-14!444;CL:0000219!8.17e-14!390;CL:0002371!1.45e-12!591;CL:0000144!1.65e-10!625;CL:0000003!1.86e-10!722;CL:0000839!2.19e-09!70;CL:0002031!6.24e-09!124;CL:0000988!7.95e-09!182;CL:0002032!8.30e-09!165;CL:0000837!8.30e-09!165;CL:0000063!1.17e-08!578;CL:0000037!1.27e-08!172;CL:0000566!1.27e-08!172;CL:0000763!4.57e-08!112;CL:0000049!4.57e-08!112;CL:0000557!9.25e-08!71;CL:0000738!1.69e-07!140;CL:0000548!2.12e-07!679;CL:0000004!2.12e-07!679;CL:0000255!2.12e-07!679;CL:0000012!2.81e-07!682;CL:0002194!7.76e-07!63;CL:0000576!7.76e-07!63;CL:0000040!7.76e-07!63;CL:0000559!7.76e-07!63;CL:0000766!9.30e-07!76 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,6.65e-17,354;CL:0000048,1.68e-16,427;CL:0002320,2.78e-16,361;CL:0000723,8.30e-16,433;CL:0000034,1.96e-14,441;CL:0000219,4.55e-14,386;CL:0000839,2.58e-10,66;CL:0000763,4.57e-09,108;CL:0000049,4.57e-09,108;CL:0002032,6.71e-09,161;CL:0000837,6.71e-09,161;CL:0000988,6.74e-09,177;CL:0000557,1.07e-08,67;CL:0002031,1.08e-08,120;CL:0000037,1.11e-08,168;CL:0000766,1.41e-07,72;CL:0002194,1.66e-07,59;CL:0000576,1.66e-07,59;CL:0000040,1.66e-07,59;CL:0000559,1.66e-07,59;CL:0000738,2.22e-07,136;CL:0002009,2.46e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.30e-15!375;UBERON:0002390!1.38e-10!102;UBERON:0003061!1.38e-10!102;UBERON:0002193!1.89e-10!112;UBERON:0002371!4.03e-08!80 | |ontology_enrichment_uberon=UBERON:0002384!7.30e-15!375;UBERON:0002390!1.38e-10!102;UBERON:0003061!1.38e-10!102;UBERON:0002193!1.89e-10!112;UBERON:0002371!4.03e-08!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.01e-15,371;UBERON:0002390,3.23e-11,98;UBERON:0003061,3.23e-11,98;UBERON:0002193,1.28e-10,108;UBERON:0002371,4.18e-09,76;UBERON:0001474,1.05e-07,82;UBERON:0002405,1.41e-07,93;UBERON:0004765,1.77e-07,90;UBERON:0001434,3.89e-07,100 | |||
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| ||
|short_description=p3@RNF14 | |short_description=p3@RNF14 | ||
}} | }} |
Latest revision as of 05:38, 25 September 2015
Short description: | p3@RNF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNF14_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000394519, uc003lmd.2_5end |
EntrezGene: | RNF14 |
HGNC: | 10058 |
UniProt: | Q9UBS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 6.65e-17 | 354 |
multi fate stem cell | 1.68e-16 | 427 |
connective tissue cell | 2.78e-16 | 361 |
somatic stem cell | 8.30e-16 | 433 |
stem cell | 1.96e-14 | 441 |
motile cell | 4.55e-14 | 386 |
myeloid lineage restricted progenitor cell | 2.58e-10 | 66 |
myeloid cell | 4.57e-09 | 108 |
common myeloid progenitor | 4.57e-09 | 108 |
hematopoietic oligopotent progenitor cell | 6.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.71e-09 | 161 |
hematopoietic cell | 6.74e-09 | 177 |
granulocyte monocyte progenitor cell | 1.07e-08 | 67 |
hematopoietic lineage restricted progenitor cell | 1.08e-08 | 120 |
hematopoietic stem cell | 1.11e-08 | 168 |
myeloid leukocyte | 1.41e-07 | 72 |
monopoietic cell | 1.66e-07 | 59 |
monocyte | 1.66e-07 | 59 |
monoblast | 1.66e-07 | 59 |
promonocyte | 1.66e-07 | 59 |
leukocyte | 2.22e-07 | 136 |
macrophage dendritic cell progenitor | 2.46e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.01e-15 | 371 |
hematopoietic system | 3.23e-11 | 98 |
blood island | 3.23e-11 | 98 |
hemolymphoid system | 1.28e-10 | 108 |
bone marrow | 4.18e-09 | 76 |
bone element | 1.05e-07 | 82 |
immune system | 1.41e-07 | 93 |
skeletal element | 1.77e-07 | 90 |
skeletal system | 3.89e-07 | 100 |