FFCP PHASE1:Hg19::chr5:137368787..137368803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51306 | |EntrezGene=51306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1335 | |HGNC=1335 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYF5,G3V0H9 | |UniProt=Q9NYF5,G3V0H9 | ||
|association_with_transcript=0bp_to_NM_001101800,NM_001101801,NM_016603,uc003lbz.2,uc003lca.2,uc003lcb.2_5end | |association_with_transcript=0bp_to_NM_001101800,NM_001101801,NM_016603,uc003lbz.2,uc003lca.2,uc003lcb.2_5end | ||
|cluster_id=chr5:137368787..137368803,- | |||
|description=CAGE_peak_2_at_FAM13B_5end | |description=CAGE_peak_2_at_FAM13B_5end | ||
|id=chr5:137368787..137368803,- | |id=chr5:137368787..137368803,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-30!115;UBERON:0001017!6.60e-18!82;UBERON:0000073!1.27e-17!94;UBERON:0001016!1.27e-17!94;UBERON:0005743!2.18e-17!86;UBERON:0001049!2.29e-17!57;UBERON:0005068!2.29e-17!57;UBERON:0006241!2.29e-17!57;UBERON:0007135!2.29e-17!57;UBERON:0000955!8.26e-15!69;UBERON:0006238!8.26e-15!69;UBERON:0002616!1.09e-14!59;UBERON:0003080!1.41e-13!42;UBERON:0002780!1.74e-13!41;UBERON:0001890!1.74e-13!41;UBERON:0006240!1.74e-13!41;UBERON:0001893!2.62e-12!34;UBERON:0002020!2.82e-12!34;UBERON:0003528!2.82e-12!34;UBERON:0002791!9.39e-12!33;UBERON:0001869!1.69e-11!32;UBERON:0002346!4.41e-11!90;UBERON:0003075!9.57e-11!86;UBERON:0007284!9.57e-11!86;UBERON:0001950!2.88e-09!20;UBERON:0000956!6.23e-09!25;UBERON:0000203!6.23e-09!25;UBERON:0002619!7.08e-09!22;UBERON:0000153!1.61e-07!129;UBERON:0007811!1.61e-07!129;UBERON:0003056!1.67e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.19e-30!115;UBERON:0001017!6.60e-18!82;UBERON:0000073!1.27e-17!94;UBERON:0001016!1.27e-17!94;UBERON:0005743!2.18e-17!86;UBERON:0001049!2.29e-17!57;UBERON:0005068!2.29e-17!57;UBERON:0006241!2.29e-17!57;UBERON:0007135!2.29e-17!57;UBERON:0000955!8.26e-15!69;UBERON:0006238!8.26e-15!69;UBERON:0002616!1.09e-14!59;UBERON:0003080!1.41e-13!42;UBERON:0002780!1.74e-13!41;UBERON:0001890!1.74e-13!41;UBERON:0006240!1.74e-13!41;UBERON:0001893!2.62e-12!34;UBERON:0002020!2.82e-12!34;UBERON:0003528!2.82e-12!34;UBERON:0002791!9.39e-12!33;UBERON:0001869!1.69e-11!32;UBERON:0002346!4.41e-11!90;UBERON:0003075!9.57e-11!86;UBERON:0007284!9.57e-11!86;UBERON:0001950!2.88e-09!20;UBERON:0000956!6.23e-09!25;UBERON:0000203!6.23e-09!25;UBERON:0002619!7.08e-09!22;UBERON:0000153!1.61e-07!129;UBERON:0007811!1.61e-07!129;UBERON:0003056!1.67e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.39e-10;41!UBERON:0001890;3.39e-10;41!UBERON:0001893;3.67e-10;34!UBERON:0002791;6.43e-10;32!UBERON:0003528;8.39e-10;34!UBERON:0002020;8.39e-10;34!UBERON:0001869;9.18e-10;32!UBERON:0000073;9.96e-10;53!UBERON:0002616;9.96e-10;53!UBERON:0001950;4.56e-09;20!UBERON:0007023;5.43e-09;114!UBERON:0000956;1.19e-08;25!UBERON:0000203;1.19e-08;25!UBERON:0002619;1.59e-08;22!UBERON:0001017;2.25e-08;75!UBERON:0001016;1.27e-07;83!UBERON:0000955;6.80e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.81e-30,114;UBERON:0001017,1.67e-17,81;UBERON:0001016,1.77e-17,89;UBERON:0001049,4.21e-17,56;UBERON:0005068,4.21e-17,56;UBERON:0006241,4.21e-17,56;UBERON:0007135,4.21e-17,56;UBERON:0000073,8.86e-16,53;UBERON:0002616,8.86e-16,53;UBERON:0000955,1.84e-14,68;UBERON:0006238,1.84e-14,68;UBERON:0002780,1.87e-13,41;UBERON:0001890,1.87e-13,41;UBERON:0003080,1.87e-13,41;UBERON:0006240,1.87e-13,41;UBERON:0001893,6.25e-12,34;UBERON:0003528,6.74e-12,34;UBERON:0002020,6.74e-12,34;UBERON:0002346,2.50e-11,86;UBERON:0001869,4.33e-11,32;UBERON:0003075,5.59e-11,82;UBERON:0007284,5.59e-11,82;UBERON:0002791,7.37e-11,32;UBERON:0001950,3.72e-09,20;UBERON:0000956,1.12e-08,25;UBERON:0000203,1.12e-08,25;UBERON:0002619,1.38e-08,22;UBERON:0003056,3.57e-08,61 | |||
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| ||
|short_description=p2@FAM13B | |short_description=p2@FAM13B | ||
}} | }} |
Latest revision as of 21:47, 24 September 2015
Short description: | p2@FAM13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM13B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001101800, NM_001101801, NM_016603, uc003lbz.2, uc003lca.2, uc003lcb.2_5end |
EntrezGene: | FAM13B |
HGNC: | 1335 |
UniProt: | Q9NYF5G3V0H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.81e-30 | 114 |
central nervous system | 1.67e-17 | 81 |
nervous system | 1.77e-17 | 89 |
neural tube | 4.21e-17 | 56 |
neural rod | 4.21e-17 | 56 |
future spinal cord | 4.21e-17 | 56 |
neural keel | 4.21e-17 | 56 |
regional part of nervous system | 8.86e-16 | 53 |
regional part of brain | 8.86e-16 | 53 |
brain | 1.84e-14 | 68 |
future brain | 1.84e-14 | 68 |
regional part of forebrain | 1.87e-13 | 41 |
forebrain | 1.87e-13 | 41 |
anterior neural tube | 1.87e-13 | 41 |
future forebrain | 1.87e-13 | 41 |
telencephalon | 6.25e-12 | 34 |
brain grey matter | 6.74e-12 | 34 |
gray matter | 6.74e-12 | 34 |
neurectoderm | 2.50e-11 | 86 |
cerebral hemisphere | 4.33e-11 | 32 |
neural plate | 5.59e-11 | 82 |
presumptive neural plate | 5.59e-11 | 82 |
regional part of telencephalon | 7.37e-11 | 32 |
neocortex | 3.72e-09 | 20 |
cerebral cortex | 1.12e-08 | 25 |
pallium | 1.12e-08 | 25 |
regional part of cerebral cortex | 1.38e-08 | 22 |
pre-chordal neural plate | 3.57e-08 | 61 |