FFCP PHASE1:Hg19::chr5:135397204..135397221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_uc010jee.2_5end | |association_with_transcript=15bp_to_uc010jee.2_5end | ||
|cluster_id=chr5:135397204..135397221,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_13_at_TGFBI_5end | |description=CAGE_peak_13_at_TGFBI_5end | ||
|id=chr5:135397204..135397221,+ | |id=chr5:135397204..135397221,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.54e-26!180;CL:0002371!1.47e-22!591;CL:0000144!8.61e-22!625;CL:0000048!1.57e-21!430;CL:0000680!2.14e-21!57;CL:0000056!2.14e-21!57;CL:0000355!2.14e-21!57;CL:0000723!8.39e-21!436;CL:0000548!2.53e-20!679;CL:0000004!2.53e-20!679;CL:0000255!2.53e-20!679;CL:0000012!1.08e-19!682;CL:0000187!2.13e-19!54;CL:0000183!5.10e-19!59;CL:0000034!5.67e-19!444;CL:0000192!3.96e-16!42;CL:0000514!3.96e-16!42;CL:0000393!2.71e-15!60;CL:0000211!2.71e-15!60;CL:0000057!2.23e-13!75;CL:0000359!4.57e-13!32;CL:0000003!5.02e-12!722;CL:0002320!2.23e-09!365;CL:0000134!1.21e-08!358;CL:0002334!2.13e-08!12;CL:0002620!3.97e-08!23;CL:0002009!4.48e-08!65;CL:0002194!7.54e-08!63;CL:0000576!7.54e-08!63;CL:0000040!7.54e-08!63;CL:0000559!7.54e-08!63;CL:0000222!1.85e-07!119;CL:0000219!3.51e-07!390 | |ontology_enrichment_celltype=CL:0000055!8.54e-26!180;CL:0002371!1.47e-22!591;CL:0000144!8.61e-22!625;CL:0000048!1.57e-21!430;CL:0000680!2.14e-21!57;CL:0000056!2.14e-21!57;CL:0000355!2.14e-21!57;CL:0000723!8.39e-21!436;CL:0000548!2.53e-20!679;CL:0000004!2.53e-20!679;CL:0000255!2.53e-20!679;CL:0000012!1.08e-19!682;CL:0000187!2.13e-19!54;CL:0000183!5.10e-19!59;CL:0000034!5.67e-19!444;CL:0000192!3.96e-16!42;CL:0000514!3.96e-16!42;CL:0000393!2.71e-15!60;CL:0000211!2.71e-15!60;CL:0000057!2.23e-13!75;CL:0000359!4.57e-13!32;CL:0000003!5.02e-12!722;CL:0002320!2.23e-09!365;CL:0000134!1.21e-08!358;CL:0002334!2.13e-08!12;CL:0002620!3.97e-08!23;CL:0002009!4.48e-08!65;CL:0002194!7.54e-08!63;CL:0000576!7.54e-08!63;CL:0000040!7.54e-08!63;CL:0000559!7.54e-08!63;CL:0000222!1.85e-07!119;CL:0000219!3.51e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-12;32!CL:0002334;9.01e-12;12!CL:0000192;2.44e-10;43!CL:0000187;1.27e-09;55!CL:0002620;7.99e-09;23!CL:0000393;7.73e-08;61!CL:0000211;7.73e-08;61!CL:0000499;9.53e-08;28!CL:0000327;3.31e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.47e-24,427;CL:0000723,1.49e-23,433;CL:0000034,2.94e-22,441;CL:0000680,2.60e-19,58;CL:0000056,2.60e-19,58;CL:0000355,2.60e-19,58;CL:0000187,8.36e-17,55;CL:0000057,7.64e-16,76;CL:0000192,4.44e-14,43;CL:0000514,4.44e-14,43;CL:0000393,6.21e-14,61;CL:0000211,6.21e-14,61;CL:0000359,1.73e-13,32;CL:0002334,1.33e-11,12;CL:0000134,1.31e-10,354;CL:0002320,3.81e-10,361;CL:0000219,5.86e-09,386;CL:0002620,6.38e-09,23;CL:0000499,1.21e-07,28;CL:0000327,3.97e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;7.30e-11;58!CL:0000514;2.44e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.26e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.44e-21!167;UBERON:0001134!1.99e-18!61;UBERON:0002036!1.99e-18!61;UBERON:0003082!1.99e-18!61;UBERON:0000486!1.85e-17!82;UBERON:0002385!4.12e-17!63;UBERON:0001015!4.12e-17!63;UBERON:0000383!4.12e-17!63;UBERON:0004290!1.43e-16!70;UBERON:0000914!8.48e-16!83;UBERON:0002329!8.48e-16!83;UBERON:0003077!8.48e-16!83;UBERON:0003059!8.48e-16!83;UBERON:0007282!8.48e-16!83;UBERON:0009618!8.48e-16!83;UBERON:0007285!8.48e-16!83;UBERON:0005256!3.95e-12!143;UBERON:0000926!6.29e-12!448;UBERON:0004120!6.29e-12!448;UBERON:0006603!6.29e-12!448;UBERON:0002384!7.24e-10!375;UBERON:0001637!1.07e-09!42;UBERON:0003509!1.07e-09!42;UBERON:0004572!1.07e-09!42;UBERON:0000490!3.07e-09!138;UBERON:0003081!3.90e-09!216;UBERON:0000468!1.58e-08!659;UBERON:0004573!2.14e-08!33;UBERON:0004571!2.14e-08!33;UBERON:0004872!8.83e-08!84;UBERON:0000467!1.03e-07!625;UBERON:0002100!1.27e-07!216;UBERON:0000480!1.40e-07!626;UBERON:0003914!6.17e-07!118 | |ontology_enrichment_uberon=UBERON:0002204!1.44e-21!167;UBERON:0001134!1.99e-18!61;UBERON:0002036!1.99e-18!61;UBERON:0003082!1.99e-18!61;UBERON:0000486!1.85e-17!82;UBERON:0002385!4.12e-17!63;UBERON:0001015!4.12e-17!63;UBERON:0000383!4.12e-17!63;UBERON:0004290!1.43e-16!70;UBERON:0000914!8.48e-16!83;UBERON:0002329!8.48e-16!83;UBERON:0003077!8.48e-16!83;UBERON:0003059!8.48e-16!83;UBERON:0007282!8.48e-16!83;UBERON:0009618!8.48e-16!83;UBERON:0007285!8.48e-16!83;UBERON:0005256!3.95e-12!143;UBERON:0000926!6.29e-12!448;UBERON:0004120!6.29e-12!448;UBERON:0006603!6.29e-12!448;UBERON:0002384!7.24e-10!375;UBERON:0001637!1.07e-09!42;UBERON:0003509!1.07e-09!42;UBERON:0004572!1.07e-09!42;UBERON:0000490!3.07e-09!138;UBERON:0003081!3.90e-09!216;UBERON:0000468!1.58e-08!659;UBERON:0004573!2.14e-08!33;UBERON:0004571!2.14e-08!33;UBERON:0004872!8.83e-08!84;UBERON:0000467!1.03e-07!625;UBERON:0002100!1.27e-07!216;UBERON:0000480!1.40e-07!626;UBERON:0003914!6.17e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.06e-09;33!UBERON:0004571;5.06e-09;33!UBERON:0001637;4.75e-08;42!UBERON:0003509;4.75e-08;42!UBERON:0004572;4.75e-08;42!UBERON:0004457;6.14e-08;9!UBERON:0000042;6.14e-08;9!UBERON:0003688;2.88e-07;6!UBERON:0002358;2.88e-07;6!UBERON:0003684;2.88e-07;6!UBERON:0001178;2.88e-07;6!UBERON:0001013;4.16e-07;14 | |||
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| ||
|short_description=p13@TGFBI | |short_description=p13@TGFBI | ||
}} | }} |
Latest revision as of 19:49, 24 September 2015
Short description: | p13@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 15bp_to_uc010jee.2_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.47e-24 | 427 |
somatic stem cell | 1.49e-23 | 433 |
stem cell | 2.94e-22 | 441 |
muscle precursor cell | 2.60e-19 | 58 |
myoblast | 2.60e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.60e-19 | 58 |
muscle cell | 8.36e-17 | 55 |
fibroblast | 7.64e-16 | 76 |
smooth muscle cell | 4.44e-14 | 43 |
smooth muscle myoblast | 4.44e-14 | 43 |
electrically responsive cell | 6.21e-14 | 61 |
electrically active cell | 6.21e-14 | 61 |
vascular associated smooth muscle cell | 1.73e-13 | 32 |
preadipocyte | 1.33e-11 | 12 |
mesenchymal cell | 1.31e-10 | 354 |
connective tissue cell | 3.81e-10 | 361 |
motile cell | 5.86e-09 | 386 |
skin fibroblast | 6.38e-09 | 23 |
stromal cell | 1.21e-07 | 28 |
extracellular matrix secreting cell | 3.97e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.33e-07 | 14 |