FFCP PHASE1:Hg19::chrX:135849883..135849957,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9459 | |EntrezGene=9459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=685 | |HGNC=685 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-224bp_to_uc011mwd.1,uc011mwe.1_5end | |association_with_transcript=-224bp_to_uc011mwd.1,uc011mwe.1_5end | ||
|cluster_id=chrX:135849883..135849957,- | |||
|description=CAGE_peak_3_at_ARHGEF6_5end | |description=CAGE_peak_3_at_ARHGEF6_5end | ||
|id=chrX:135849883..135849957,- | |id=chrX:135849883..135849957,- | ||
|ontology_enrichment_celltype=CL:0000766!5.63e-20!76;CL:0000557!4.85e-19!71;CL:0000839!5.84e-17!70;CL:0002009!7.45e-17!65;CL:0002194!1.43e-16!63;CL:0000576!1.43e-16!63;CL:0000040!1.43e-16!63;CL:0000559!1.43e-16!63;CL:0002057!2.07e-16!42;CL:0000763!4.78e-16!112;CL:0000049!4.78e-16!112;CL:0000860!2.95e-13!45;CL:0002393!9.04e-07!9;CL:0002397!9.04e-07!9 | |ontology_enrichment_celltype=CL:0000766!5.63e-20!76;CL:0000557!4.85e-19!71;CL:0000839!5.84e-17!70;CL:0002009!7.45e-17!65;CL:0002194!1.43e-16!63;CL:0000576!1.43e-16!63;CL:0000040!1.43e-16!63;CL:0000559!1.43e-16!63;CL:0002057!2.07e-16!42;CL:0000763!4.78e-16!112;CL:0000049!4.78e-16!112;CL:0000860!2.95e-13!45;CL:0002393!9.04e-07!9;CL:0002397!9.04e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;2.44e-11;48!CL:0000860;1.54e-10;33!CL:0002057;1.54e-10;33!CL:0000473;2.06e-10;39!CL:0000234;2.06e-10;39!CL:0000766;2.69e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.32e-23,72;CL:0000557,7.96e-22,67;CL:0002009,1.23e-19,61;CL:0002194,2.27e-19,59;CL:0000576,2.27e-19,59;CL:0000040,2.27e-19,59;CL:0000559,2.27e-19,59;CL:0000839,3.46e-19,66;CL:0000473,2.74e-18,48;CL:0000234,2.74e-18,48;CL:0000763,1.84e-17,108;CL:0000049,1.84e-17,108;CL:0000860,6.48e-17,42;CL:0002057,6.48e-17,42;CL:0002393,6.00e-07,9;CL:0002397,6.00e-07,9;CL:0000738,6.82e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.29e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.10e-24!115;UBERON:0002193!8.75e-19!112;UBERON:0002390!1.02e-17!102;UBERON:0003061!1.02e-17!102;UBERON:0002371!1.65e-17!80;UBERON:0001474!2.51e-16!86;UBERON:0004765!1.34e-15!101;UBERON:0001434!1.34e-15!101;UBERON:0002204!6.14e-13!167;UBERON:0002405!2.24e-12!115;UBERON:0003081!2.77e-10!216;UBERON:0001049!2.06e-09!57;UBERON:0005068!2.06e-09!57;UBERON:0006241!2.06e-09!57;UBERON:0007135!2.06e-09!57;UBERON:0000479!2.09e-09!787;UBERON:0002616!7.19e-08!59;UBERON:0003075!8.56e-08!86;UBERON:0007284!8.56e-08!86;UBERON:0003080!1.26e-07!42;UBERON:0002346!2.20e-07!90;UBERON:0002384!2.71e-07!375;UBERON:0002780!3.76e-07!41;UBERON:0001890!3.76e-07!41;UBERON:0006240!3.76e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!6.10e-24!115;UBERON:0002193!8.75e-19!112;UBERON:0002390!1.02e-17!102;UBERON:0003061!1.02e-17!102;UBERON:0002371!1.65e-17!80;UBERON:0001474!2.51e-16!86;UBERON:0004765!1.34e-15!101;UBERON:0001434!1.34e-15!101;UBERON:0002204!6.14e-13!167;UBERON:0002405!2.24e-12!115;UBERON:0003081!2.77e-10!216;UBERON:0001049!2.06e-09!57;UBERON:0005068!2.06e-09!57;UBERON:0006241!2.06e-09!57;UBERON:0007135!2.06e-09!57;UBERON:0000479!2.09e-09!787;UBERON:0002616!7.19e-08!59;UBERON:0003075!8.56e-08!86;UBERON:0007284!8.56e-08!86;UBERON:0003080!1.26e-07!42;UBERON:0002346!2.20e-07!90;UBERON:0002384!2.71e-07!375;UBERON:0002780!3.76e-07!41;UBERON:0001890!3.76e-07!41;UBERON:0006240!3.76e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.58e-24,114;UBERON:0002193,6.13e-21,108;UBERON:0002390,2.79e-20,98;UBERON:0003061,2.79e-20,98;UBERON:0002371,4.55e-20,76;UBERON:0002405,4.81e-19,93;UBERON:0001434,1.13e-18,100;UBERON:0001474,1.18e-18,82;UBERON:0004765,2.09e-18,90;UBERON:0002204,2.66e-15,167;UBERON:0003081,3.88e-14,203;UBERON:0000479,1.08e-12,773;UBERON:0000926,5.97e-12,315;UBERON:0004120,5.97e-12,315;UBERON:0006603,5.97e-12,315;UBERON:0001049,4.31e-09,56;UBERON:0005068,4.31e-09,56;UBERON:0006241,4.31e-09,56;UBERON:0007135,4.31e-09,56;UBERON:0000073,2.96e-08,53;UBERON:0002616,2.96e-08,53;UBERON:0003075,2.97e-08,82;UBERON:0007284,2.97e-08,82;UBERON:0002346,6.98e-08,86;UBERON:0000923,2.22e-07,560;UBERON:0010316,2.22e-07,560;UBERON:0005291,2.22e-07,560;UBERON:0006598,2.22e-07,560;UBERON:0010317,2.22e-07,560;UBERON:0002532,2.22e-07,560;UBERON:0002780,3.04e-07,41;UBERON:0001890,3.04e-07,41;UBERON:0003080,3.04e-07,41;UBERON:0006240,3.04e-07,41;UBERON:0002050,3.50e-07,564;UBERON:0002384,5.86e-07,371 | |||
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| ||
|short_description=p3@ARHGEF6 | |short_description=p3@ARHGEF6 | ||
}} | }} |
Latest revision as of 15:16, 19 September 2015
Short description: | p3@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGEF6_5end |
Coexpression cluster: | NA |
Association with transcript: | -224bp_to_uc011mwd.1, uc011mwe.1_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.32e-23 | 72 |
granulocyte monocyte progenitor cell | 7.96e-22 | 67 |
macrophage dendritic cell progenitor | 1.23e-19 | 61 |
monopoietic cell | 2.27e-19 | 59 |
monocyte | 2.27e-19 | 59 |
monoblast | 2.27e-19 | 59 |
promonocyte | 2.27e-19 | 59 |
myeloid lineage restricted progenitor cell | 3.46e-19 | 66 |
defensive cell | 2.74e-18 | 48 |
phagocyte | 2.74e-18 | 48 |
myeloid cell | 1.84e-17 | 108 |
common myeloid progenitor | 1.84e-17 | 108 |
classical monocyte | 6.48e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.48e-17 | 42 |
intermediate monocyte | 6.00e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.00e-07 | 9 |
leukocyte | 6.82e-07 | 136 |