FFCP PHASE1:Hg19::chrX:131351405..131351424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57826 | |EntrezGene=57826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21165 | |HGNC=21165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_uc004ewo.2_5end | |association_with_transcript=65bp_to_uc004ewo.2_5end | ||
|cluster_id=chrX:131351405..131351424,- | |||
|description=CAGE_peak_8_at_RAP2C_5end | |description=CAGE_peak_8_at_RAP2C_5end | ||
|id=chrX:131351405..131351424,- | |id=chrX:131351405..131351424,- | ||
|ontology_enrichment_celltype=CL:0000860!1.21e-18!45;CL:0002057!1.34e-18!42;CL:0000766!5.86e-16!76;CL:0002194!6.59e-16!63;CL:0000576!6.59e-16!63;CL:0000040!6.59e-16!63;CL:0000559!6.59e-16!63;CL:0002009!1.35e-15!65;CL:0000557!4.60e-14!71;CL:0000839!5.00e-14!70;CL:0000738!7.32e-12!140;CL:0002087!5.91e-11!119;CL:0002031!6.41e-10!124;CL:0000012!3.66e-08!682;CL:0000548!3.66e-08!679;CL:0000004!3.66e-08!679;CL:0000255!3.66e-08!679;CL:0000763!6.64e-08!112;CL:0000049!6.64e-08!112;CL:0000063!3.59e-07!578;CL:0000037!5.22e-07!172;CL:0000566!5.22e-07!172 | |ontology_enrichment_celltype=CL:0000860!1.21e-18!45;CL:0002057!1.34e-18!42;CL:0000766!5.86e-16!76;CL:0002194!6.59e-16!63;CL:0000576!6.59e-16!63;CL:0000040!6.59e-16!63;CL:0000559!6.59e-16!63;CL:0002009!1.35e-15!65;CL:0000557!4.60e-14!71;CL:0000839!5.00e-14!70;CL:0000738!7.32e-12!140;CL:0002087!5.91e-11!119;CL:0002031!6.41e-10!124;CL:0000012!3.66e-08!682;CL:0000548!3.66e-08!679;CL:0000004!3.66e-08!679;CL:0000255!3.66e-08!679;CL:0000763!6.64e-08!112;CL:0000049!6.64e-08!112;CL:0000063!3.59e-07!578;CL:0000037!5.22e-07!172;CL:0000566!5.22e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.97e-18;33!CL:0002057;5.97e-18;33!CL:0000473;1.31e-14;39!CL:0000234;1.31e-14;39!CL:0000576;3.09e-14;48!CL:0000766;6.09e-10;69!CL:0000039;2.34e-09;7!CL:0000586;2.34e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.97e-27,42;CL:0002057,2.97e-27,42;CL:0000473,6.82e-26,48;CL:0000234,6.82e-26,48;CL:0002009,9.72e-20,61;CL:0002194,2.00e-19,59;CL:0000576,2.00e-19,59;CL:0000040,2.00e-19,59;CL:0000559,2.00e-19,59;CL:0000766,9.09e-19,72;CL:0000557,6.19e-17,67;CL:0000839,3.55e-16,66;CL:0000738,3.35e-12,136;CL:0002087,3.90e-11,115;CL:0000039,2.96e-10,7;CL:0000586,2.96e-10,7;CL:0002031,3.63e-10,120;CL:0000763,2.51e-09,108;CL:0000049,2.51e-09,108;CL:0002393,2.34e-08,9;CL:0002397,2.34e-08,9;CL:0000037,2.72e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;5.54e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.39e-07;4!DOID:1612;3.39e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.81e-07,4;DOID:1612,3.81e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.48e-11!80;UBERON:0001474!3.30e-10!86;UBERON:0004765!3.73e-10!101;UBERON:0001434!3.73e-10!101;UBERON:0002405!4.58e-10!115;UBERON:0002390!4.75e-10!102;UBERON:0003061!4.75e-10!102;UBERON:0002193!5.93e-10!112;UBERON:0002204!1.75e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!6.48e-11!80;UBERON:0001474!3.30e-10!86;UBERON:0004765!3.73e-10!101;UBERON:0001434!3.73e-10!101;UBERON:0002405!4.58e-10!115;UBERON:0002390!4.75e-10!102;UBERON:0003061!4.75e-10!102;UBERON:0002193!5.93e-10!112;UBERON:0002204!1.75e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-13,76;UBERON:0001474,7.75e-13,82;UBERON:0004765,2.98e-12,90;UBERON:0001434,1.20e-10,100;UBERON:0002405,1.86e-10,93;UBERON:0002390,3.71e-10,98;UBERON:0003061,3.71e-10,98;UBERON:0002193,2.45e-09,108;UBERON:0002204,4.84e-07,167 | |||
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| ||
|short_description=p8@RAP2C | |short_description=p8@RAP2C | ||
}} | }} |
Latest revision as of 11:08, 19 September 2015
Short description: | p8@RAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RAP2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_uc004ewo.2_5end |
EntrezGene: | RAP2C |
HGNC: | 21165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.97e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-27 | 42 |
defensive cell | 6.82e-26 | 48 |
phagocyte | 6.82e-26 | 48 |
macrophage dendritic cell progenitor | 9.72e-20 | 61 |
monopoietic cell | 2.00e-19 | 59 |
monocyte | 2.00e-19 | 59 |
monoblast | 2.00e-19 | 59 |
promonocyte | 2.00e-19 | 59 |
myeloid leukocyte | 9.09e-19 | 72 |
granulocyte monocyte progenitor cell | 6.19e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.55e-16 | 66 |
leukocyte | 3.35e-12 | 136 |
nongranular leukocyte | 3.90e-11 | 115 |
germ line cell | 2.96e-10 | 7 |
germ cell | 2.96e-10 | 7 |
hematopoietic lineage restricted progenitor cell | 3.63e-10 | 120 |
myeloid cell | 2.51e-09 | 108 |
common myeloid progenitor | 2.51e-09 | 108 |
intermediate monocyte | 2.34e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.34e-08 | 9 |
hematopoietic stem cell | 2.72e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.32e-13 | 76 |
bone element | 7.75e-13 | 82 |
skeletal element | 2.98e-12 | 90 |
skeletal system | 1.20e-10 | 100 |
immune system | 1.86e-10 | 93 |
hematopoietic system | 3.71e-10 | 98 |
blood island | 3.71e-10 | 98 |
hemolymphoid system | 2.45e-09 | 108 |
musculoskeletal system | 4.84e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.81e-07 | 4 |
breast cancer | 3.81e-07 | 4 |