FFCP PHASE1:Hg19::chr5:122163075..122163087,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6643 | |EntrezGene=6643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11173 | |HGNC=11173 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000507852_5end | |association_with_transcript=-41bp_to_ENST00000507852_5end | ||
|cluster_id=chr5:122163075..122163087,+ | |||
|description=CAGE_peak_3_at_SNX2_5end | |description=CAGE_peak_3_at_SNX2_5end | ||
|id=chr5:122163075..122163087,+ | |id=chr5:122163075..122163087,+ | ||
|ontology_enrichment_celltype=CL:0002009!2.02e-15!65;CL:0002194!6.39e-15!63;CL:0000576!6.39e-15!63;CL:0000040!6.39e-15!63;CL:0000559!6.39e-15!63;CL:0002087!5.07e-13!119;CL:0002031!1.46e-12!124;CL:0000557!1.48e-12!71;CL:0000839!1.74e-12!70;CL:0000860!3.49e-11!45;CL:0000738!1.97e-10!140;CL:0002057!3.45e-10!42;CL:0000766!5.15e-10!76;CL:0002032!1.49e-08!165;CL:0000837!1.49e-08!165;CL:0000037!6.35e-08!172;CL:0000566!6.35e-08!172;CL:0000763!1.19e-07!112;CL:0000049!1.19e-07!112;CL:0002320!4.50e-07!365;CL:0000134!8.73e-07!358 | |ontology_enrichment_celltype=CL:0002009!2.02e-15!65;CL:0002194!6.39e-15!63;CL:0000576!6.39e-15!63;CL:0000040!6.39e-15!63;CL:0000559!6.39e-15!63;CL:0002087!5.07e-13!119;CL:0002031!1.46e-12!124;CL:0000557!1.48e-12!71;CL:0000839!1.74e-12!70;CL:0000860!3.49e-11!45;CL:0000738!1.97e-10!140;CL:0002057!3.45e-10!42;CL:0000766!5.15e-10!76;CL:0002032!1.49e-08!165;CL:0000837!1.49e-08!165;CL:0000037!6.35e-08!172;CL:0000566!6.35e-08!172;CL:0000763!1.19e-07!112;CL:0000049!1.19e-07!112;CL:0002320!4.50e-07!365;CL:0000134!8.73e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.31e-11;39!CL:0000234;1.31e-11;39!CL:0000236;2.72e-11;13!CL:0000235;3.14e-11;6!CL:0000576;1.95e-08;48!CL:0000860;5.45e-08;33!CL:0002057;5.45e-08;33!CL:0000766;2.85e-07;69!CL:0002393;5.52e-07;6!CL:0002397;5.52e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.64e-20,48;CL:0000234,4.64e-20,48;CL:0002194,3.48e-18,59;CL:0000576,3.48e-18,59;CL:0000040,3.48e-18,59;CL:0000559,3.48e-18,59;CL:0002009,2.20e-17,61;CL:0000839,1.34e-15,66;CL:0000557,2.84e-15,67;CL:0002087,3.49e-15,115;CL:0002031,3.40e-14,120;CL:0000766,8.69e-14,72;CL:0000860,4.16e-13,42;CL:0002057,4.16e-13,42;CL:0000738,1.55e-11,136;CL:0000235,2.56e-11,6;CL:0000236,8.28e-11,14;CL:0002032,3.41e-09,161;CL:0000837,3.41e-09,161;CL:0000037,1.78e-08,168;CL:0000763,5.24e-08,108;CL:0000049,5.24e-08,108;CL:0000988,1.21e-07,177;CL:0002320,1.82e-07,361;CL:0002393,4.40e-07,9;CL:0002397,4.40e-07,9;CL:0000134,7.96e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;9.40e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.90e-10!80;UBERON:0001474!6.10e-10!86;UBERON:0004765!3.02e-08!101;UBERON:0001434!3.02e-08!101;UBERON:0002384!8.45e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!1.90e-10!80;UBERON:0001474!6.10e-10!86;UBERON:0004765!3.02e-08!101;UBERON:0001434!3.02e-08!101;UBERON:0002384!8.45e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-15,76;UBERON:0004765,2.28e-14,90;UBERON:0001474,7.56e-14,82;UBERON:0001434,3.21e-12,100;UBERON:0002405,1.97e-11,93;UBERON:0002390,1.60e-10,98;UBERON:0003061,1.60e-10,98;UBERON:0002193,5.78e-09,108;UBERON:0002204,7.92e-08,167;UBERON:0002384,6.18e-07,371 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,1.34465029290355,0.602694528023977,2.92124036154949,0.975865597581014,0,0,0,0,0.273748850145768,0.125542639594803,0.993374274723366,0.57470412614962,0.472264687882075,0,0,0.309632246632152,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.401088894940283,1.08505435357926,0.671746422719773,0.971680998056939,0.257575567634187,2.4717700592526,1.88937971844405,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,1.7261543539329,1.0246428261164,0.945928919554341,0,1.93645405075148,0,0.564727018627814,1.09162460023138,0.674170453335254,1.83650335422542,0,0.639337125799041,0.659702600373432,2.79249120670285,0.426224750532694,0.870627715885752,0.56738522469114,0,1.50749199154046,1.0429658368404,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,1.47878700418359,2.33864729961548,1.67726916406701,1.01095768031846,0.450530678524519,1.12507910687956,0.570025487482497,2.98375015798635,0.730656615058536,1.75996244461323,2.73069305631066,0,1.28019066769952,2.00197993518006,1.72425731986345,0.661044872784862,0.954053754535364,1.1384259382189,1.76171156811282,1.91136614062614,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0.946895611469467,0,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,0.640456598628376,0.780356085359269,0.328875809207352,0.276350017785848,0,0.296573126324121,0.535081656179426,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0.95569624297229,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0,0.821127996921047,0,0.802320587350522,0.289648807765598,0,0,0,0,0,0.579386075843295,0,0.486634870302636,0.378139268656271,0,0.351339142772504,0.0654895377488563,0,0,1.29818957461873,0.348259474598534,1.86141144726411,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,0,0.286836620748814,0,1.12135520028461,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0.312160076830321,0,0.597794722207204,0.23486899728753,0,0.561803226808994,0,0.491337269247072,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0.612975591598039,0,0.340296549480063,0.179389635688862,0,0.635795703478686,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.323292113637624,0,0.403008392910561,0,0.193260853163297,0.272746120590835,0,0.365921118388786,0.662648841607426,0.813357600086629,0.829288440122964,0.504641701751257,1.09493207722749,0,0.643240938192885,0,0,1.44375896333917,0.473227200159376,0,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.674156540800822,0.784885860501384,0,0,0,0,0,1.26755034821831,0,0,0,0.737930631258681,0.514703430895577,0,0,0.703702806881416,0.277765335475589,0,0,0,0.811512834825538,0.117408694235822,0.144366447761074,0,0.761016608938393,0.790204397959275,0,1.72351904261178,0.468008530278475,1.18904929830983,0,0.671928512795438,0.283550194484773,0.268675568108545,0.581267877027924,0,0,0.088048434013226,0,0.144119953416961,0,0.444485260045183,0,0,0,0.719792448923265,0,0.857479297891735,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.428933980974443,0,0,0.65147236858747,0,0.791951872933429,0.602878754119172,0,0.499864955910285,2.43247561282381,2.51128545716063,16.8667151586425,0,0,1.42636905040718,0.434343920002738,0,0.179060963239896,0.112085143993527,0.197030760201927,1.2937654491571,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0.49076596687656,1.50051156317903,1.08506009479894,1.03985430765404,0.892144943985809,0.946214490203608,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.60818530127658,0,0,0.206768026122887,0,0.640365346820666,0,0,0,0.248107807818777,0.61384789315225,0,0.256278298511402,0,0.482561763430822,0,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0.464841513839837,0.241718899183244,0.40101294060657,0.460404944679482,0.229628896329213,0.364182336013434,0.524497659837696,0,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,1.0795795805107,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0.435050081742686,0.170453254832202,0,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.571890581771475,0,0.855877976067841,0,0,0.179872457583315,0,0.589062011728432,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,1.31178950409327,0,0.30982349809975,0,0.717056761020258,0.294747123039363,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,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| ||
|short_description=p3@SNX2 | |short_description=p3@SNX2 | ||
}} | }} |
Latest revision as of 23:54, 19 September 2015
Short description: | p3@SNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000507852_5end |
EntrezGene: | SNX2 |
HGNC: | 11173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.64e-20 | 48 |
phagocyte | 4.64e-20 | 48 |
monopoietic cell | 3.48e-18 | 59 |
monocyte | 3.48e-18 | 59 |
monoblast | 3.48e-18 | 59 |
promonocyte | 3.48e-18 | 59 |
macrophage dendritic cell progenitor | 2.20e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.34e-15 | 66 |
granulocyte monocyte progenitor cell | 2.84e-15 | 67 |
nongranular leukocyte | 3.49e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 3.40e-14 | 120 |
myeloid leukocyte | 8.69e-14 | 72 |
classical monocyte | 4.16e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.16e-13 | 42 |
leukocyte | 1.55e-11 | 136 |
macrophage | 2.56e-11 | 6 |
B cell | 8.28e-11 | 14 |
hematopoietic oligopotent progenitor cell | 3.41e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.41e-09 | 161 |
hematopoietic stem cell | 1.78e-08 | 168 |
myeloid cell | 5.24e-08 | 108 |
common myeloid progenitor | 5.24e-08 | 108 |
hematopoietic cell | 1.21e-07 | 177 |
connective tissue cell | 1.82e-07 | 361 |
intermediate monocyte | 4.40e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.40e-07 | 9 |
mesenchymal cell | 7.96e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-15 | 76 |
skeletal element | 2.28e-14 | 90 |
bone element | 7.56e-14 | 82 |
skeletal system | 3.21e-12 | 100 |
immune system | 1.97e-11 | 93 |
hematopoietic system | 1.60e-10 | 98 |
blood island | 1.60e-10 | 98 |
hemolymphoid system | 5.78e-09 | 108 |
musculoskeletal system | 7.92e-08 | 167 |
connective tissue | 6.18e-07 | 371 |