FFCP PHASE1:Hg19::chr5:103551489..103551493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:103551489..103551493,+ | |||
|coexpression_cluster_id=C4445 | |||
|description=CAGE_peak_at_chr5:103551489..103551493,+ | |description=CAGE_peak_at_chr5:103551489..103551493,+ | ||
|id=chr5:103551489..103551493,+ | |id=chr5:103551489..103551493,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.03e-11!254;CL:0000181!1.27e-09!12;CL:0000417!1.27e-09!12;CL:0000668!1.27e-09!12;CL:0000414!1.27e-09!12;CL:0000412!1.27e-09!12;CL:0000182!1.27e-09!12;CL:0000223!1.97e-09!59;CL:0000039!2.23e-09!7;CL:0000586!2.23e-09!7;CL:0002178!2.48e-08!3 | |ontology_enrichment_celltype=CL:0000066!1.03e-11!254;CL:0000181!1.27e-09!12;CL:0000417!1.27e-09!12;CL:0000668!1.27e-09!12;CL:0000414!1.27e-09!12;CL:0000412!1.27e-09!12;CL:0000182!1.27e-09!12;CL:0000223!1.97e-09!59;CL:0000039!2.23e-09!7;CL:0000586!2.23e-09!7;CL:0002178!2.48e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.27e-09;12!CL:0000243;7.99e-07;15!CL:0000125;7.99e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.27e-09,12;CL:0000243,7.43e-07,15;CL:0000125,7.43e-07,15;CL:0000030,7.43e-07,15;CL:0000339,7.43e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.73e-10;10!UBERON:0004161;5.79e-10;11!UBERON:0009497;1.42e-08;13!UBERON:0001041;4.02e-08;30!CL:0000339;7.99e-07;15 | |||
|ontology_enrichment_disease=DOID:305!1.46e-35!106;DOID:162!1.04e-32!235;DOID:0050687!1.87e-32!143;DOID:14566!1.08e-31!239;DOID:0050686!1.16e-12!137;DOID:299!2.50e-10!25;DOID:3095!2.56e-08!22;DOID:2994!2.56e-08!22;DOID:1749!5.39e-08!14;DOID:7!7.81e-08!39;DOID:1036!9.78e-08!8 | |ontology_enrichment_disease=DOID:305!1.46e-35!106;DOID:162!1.04e-32!235;DOID:0050687!1.87e-32!143;DOID:14566!1.08e-31!239;DOID:0050686!1.16e-12!137;DOID:299!2.50e-10!25;DOID:3095!2.56e-08!22;DOID:2994!2.56e-08!22;DOID:1749!5.39e-08!14;DOID:7!7.81e-08!39;DOID:1036!9.78e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:4960;6.72e-26;1!DOID:0070004;6.72e-26;1!DOID:3093;2.71e-09;11!DOID:5409;1.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.26e-25,1;DOID:0070004,1.26e-25,1;DOID:3093,2.44e-09,11;DOID:5409,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0009497!9.17e-12!25;UBERON:0000015!9.17e-12!25;UBERON:0002423!9.17e-12!25;UBERON:0006235!9.17e-12!25;UBERON:0004161!9.17e-12!25;UBERON:0007499!5.03e-10!25;UBERON:0009856!1.51e-09!26;UBERON:0008835!1.62e-09!22;UBERON:0003894!1.62e-09!22;UBERON:0005911!3.69e-09!82;UBERON:0009854!5.15e-09!23;UBERON:0002294!6.53e-09!7;UBERON:0001173!6.53e-09!7;UBERON:0004912!6.53e-09!7;UBERON:0002107!2.88e-07!19;UBERON:0006925!2.88e-07!19;UBERON:0008836!2.88e-07!19;UBERON:0003929!8.94e-07!54 | |ontology_enrichment_uberon=UBERON:0009497!9.17e-12!25;UBERON:0000015!9.17e-12!25;UBERON:0002423!9.17e-12!25;UBERON:0006235!9.17e-12!25;UBERON:0004161!9.17e-12!25;UBERON:0007499!5.03e-10!25;UBERON:0009856!1.51e-09!26;UBERON:0008835!1.62e-09!22;UBERON:0003894!1.62e-09!22;UBERON:0005911!3.69e-09!82;UBERON:0009854!5.15e-09!23;UBERON:0002294!6.53e-09!7;UBERON:0001173!6.53e-09!7;UBERON:0004912!6.53e-09!7;UBERON:0002107!2.88e-07!19;UBERON:0006925!2.88e-07!19;UBERON:0008836!2.88e-07!19;UBERON:0003929!8.94e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.72e-26;1!UBERON:0009842;6.72e-26;1!UBERON:0003704;6.72e-26;1!UBERON:0001171;6.72e-26;1!UBERON:0001172;6.72e-26;1!UBERON:0001280;1.47e-09;3!UBERON:0004647;1.47e-09;3!UBERON:0002394;1.75e-07;4!UBERON:0003928;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.62e-26,1;UBERON:0009842,7.62e-26,1;UBERON:0003704,7.62e-26,1;UBERON:0001171,7.62e-26,1;UBERON:0001172,7.62e-26,1;UBERON:0001280,1.54e-09,3;UBERON:0004647,1.54e-09,3;UBERON:0005171,1.54e-09,3 | |||
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| ||
|short_description=p@chr5:103551489..103551493,+ | |short_description=p@chr5:103551489..103551493,+ | ||
}} | }} |
Latest revision as of 08:25, 30 July 2015
Short description: | p@chr5:103551489..103551493, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:103551489..103551493, + |
Coexpression cluster: | C4445_glioblastoma_somatostatinoma_small_teratocarcinoma_transitionalcell_hepatoblastoma_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.27e-09 | 12 |
glial cell (sensu Vertebrata) | 7.43e-07 | 15 |
glial cell | 7.43e-07 | 15 |
glioblast | 7.43e-07 | 15 |
glioblast (sensu Vertebrata) | 7.43e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.62e-26 | 1 |
acinus | 7.62e-26 | 1 |
intrahepatic bile duct | 7.62e-26 | 1 |
portal lobule | 7.62e-26 | 1 |
hepatic acinus | 7.62e-26 | 1 |
liver parenchyma | 1.54e-09 | 3 |
liver lobule | 1.54e-09 | 3 |
hepatic duct | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.26e-25 | 1 |
myeloma | 1.26e-25 | 1 |
nervous system cancer | 2.44e-09 | 11 |
lung small cell carcinoma | 1.40e-07 | 4 |