FFCP PHASE1:Hg19::chr9:97402366..97402395,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2203 | |EntrezGene=2203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3606 | |HGNC=3606 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VZC3 | |UniProt=Q5VZC3 | ||
|association_with_transcript=23bp_to_ENST00000414122_5end | |association_with_transcript=23bp_to_ENST00000414122_5end | ||
|cluster_id=chr9:97402366..97402395,- | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_5_at_FBP1_5end | |description=CAGE_peak_5_at_FBP1_5end | ||
|id=chr9:97402366..97402395,- | |id=chr9:97402366..97402395,- | ||
|ontology_enrichment_celltype=CL:0002139!6.09e-16!24;CL:0000115!8.84e-13!35;CL:0000071!3.44e-12!18;CL:0002546!3.44e-12!18;CL:0002078!1.63e-10!44;CL:0002543!3.89e-09!6;CL:0002618!3.46e-07!3 | |ontology_enrichment_celltype=CL:0002139!6.09e-16!24;CL:0000115!8.84e-13!35;CL:0000071!3.44e-12!18;CL:0002546!3.44e-12!18;CL:0002078!1.63e-10!44;CL:0002543!3.89e-09!6;CL:0002618!3.46e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.56e-26;7!CL:0000586;5.56e-26;7!CL:0002545;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.89e-26,7;CL:0000586,4.89e-26,7;CL:0000066,4.77e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.25e-28;10!UBERON:0005564;7.25e-28;10!UBERON:0009847;9.79e-16;3!UBERON:0003353;9.79e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;4.37e-23;2!DOID:3111;2.91e-12;1!DOID:3603;2.91e-12;1!DOID:299;6.59e-11;25!DOID:3095;1.95e-08;22!DOID:2994;1.95e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,5.47e-23,2;DOID:305,2.06e-13,106;DOID:3111,1.75e-12,1;DOID:3603,1.75e-12,1;DOID:299,5.99e-11,25;DOID:0050687,1.70e-09,143;DOID:3095,1.88e-08,22;DOID:2994,1.88e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.44e-12!18;UBERON:0004638!3.44e-12!18;UBERON:0004852!3.44e-12!18;UBERON:0000487!2.61e-11!22;UBERON:0001638!2.33e-10!9;UBERON:0003920!2.33e-10!9;UBERON:0004582!2.33e-10!9;UBERON:0006914!1.40e-09!25;UBERON:0005409!2.38e-07!35;UBERON:0004111!7.06e-07!241;UBERON:0000473!7.71e-07!8;UBERON:0000464!8.91e-07!104;UBERON:0002066!9.38e-07!5 | |ontology_enrichment_uberon=UBERON:0001986!3.44e-12!18;UBERON:0004638!3.44e-12!18;UBERON:0004852!3.44e-12!18;UBERON:0000487!2.61e-11!22;UBERON:0001638!2.33e-10!9;UBERON:0003920!2.33e-10!9;UBERON:0004582!2.33e-10!9;UBERON:0006914!1.40e-09!25;UBERON:0005409!2.38e-07!35;UBERON:0004111!7.06e-07!241;UBERON:0000473!7.71e-07!8;UBERON:0000464!8.91e-07!104;UBERON:0002066!9.38e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.86e-23;8!UBERON:0003101;5.88e-18;22!UBERON:0000079;5.88e-18;22!UBERON:0003135;1.18e-16;11!UBERON:0000991;2.89e-13;21!UBERON:0004913;1.32e-12;1!UBERON:0003703;1.32e-12;1!UBERON:0001174;1.32e-12;1!UBERON:0004914;1.32e-12;1!UBERON:0002394;3.26e-12;4!UBERON:0003928;3.26e-12;4!UBERON:0002323;1.19e-08;45!UBERON:0002294;2.37e-07;7!UBERON:0001173;2.37e-07;7!UBERON:0005800;9.27e-07;2!UBERON:0001515;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.93e-23,8;UBERON:0003101,5.54e-18,22;UBERON:0000079,5.54e-18,22;UBERON:0003135,1.09e-16,11;UBERON:0000991,2.44e-13,21;UBERON:0009196,2.44e-13,21;UBERON:0009117,2.44e-13,21;UBERON:0005564,2.44e-13,21;UBERON:0004176,9.93e-13,22;UBERON:0004913,1.25e-12,1;UBERON:0003703,1.25e-12,1;UBERON:0001174,1.25e-12,1;UBERON:0004914,1.25e-12,1;UBERON:0003886,1.60e-09,54;UBERON:0005156,1.17e-08,59;UBERON:0000990,1.17e-08,59;UBERON:0002394,1.94e-08,6;UBERON:0003928,1.94e-08,6;UBERON:0002323,2.24e-08,46;UBERON:0002553,2.37e-08,61;UBERON:0004458,7.74e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0,0,0.324547393654683,0,0.797747763113191,0,0,0,0.79504962946682,0,0,0,0,0.825354125820202,0.417989933073621,0,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0,1.10298924103761,0,0.803697554556718,0.898117490504679,0.788280363383256,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.813357600086629,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0,1.58040879591855,0,0,0.702012795417713,0.594524649154913,0,0,0,0,0,0,0,0.352193736052904,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0,0,0,0,0.850468526382578,0,3.08454505380579,0,0,0.509752546090077,0,0,0,0,0,0.656029291399411,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24670877868317,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0.586993856796269,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0.482259445395058,0.137539436597234,0,0,0,0,0,0.630445658393585,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0.13223260174269,0,1.40963004463334,1.06787412567695,0.628817220398664,0.828478110694391,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0.983617892129413,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90180911022764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,2.36569737947272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0,1.30013224972365,2.55832224351759,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0.463044948647668,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,8.3630840388425,1.60330443159336,2.11358268930143,12.033961886034,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0,0,5.8308568541919,0,0,0,0,0,0.0717222053926763,0,0,0,0,1.25755282949222,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0,0,0.324547393654683,0,0.797747763113191,0,0,0,0.79504962946682,0,0,0,0,0.825354125820202,0.417989933073621,0,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0,1.10298924103761,0,0.803697554556718,0.898117490504679,0.788280363383256,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.813357600086629,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0,1.58040879591855,0,0,0.702012795417713,0.594524649154913,0,0,0,0,0,0,0,0.352193736052904,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0,0,0,0,0.850468526382578,0,3.08454505380579,0,0,0.509752546090077,0,0,0,0,0,0.656029291399411,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24670877868317,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0.586993856796269,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0.482259445395058,0.137539436597234,0,0,0,0,0,0.630445658393585,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0.13223260174269,0,1.40963004463334,1.06787412567695,0.628817220398664,0.828478110694391,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0.983617892129413,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90180911022764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,2.36569737947272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0,1.30013224972365,2.55832224351759,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0.463044948647668,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,8.3630840388425,1.60330443159336,2.11358268930143,12.033961886034,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0,0,5.8308568541919,0,0,0,0,0,0.0717222053926763,0,0,0,0,1.25755282949222,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@FBP1 | |short_description=p5@FBP1 | ||
}} | }} |
Latest revision as of 10:01, 18 September 2015
Short description: | p5@FBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FBP1_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 23bp_to_ENST00000414122_5end |
EntrezGene: | FBP1 |
HGNC: | 3606 |
UniProt: | Q5VZC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.89e-26 | 7 |
germ cell | 4.89e-26 | 7 |
epithelial cell | 4.77e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
testis | 7.93e-23 | 8 |
male organism | 5.54e-18 | 22 |
male reproductive system | 5.54e-18 | 22 |
male reproductive organ | 1.09e-16 | 11 |
gonad | 2.44e-13 | 21 |
indifferent external genitalia | 2.44e-13 | 21 |
indifferent gonad | 2.44e-13 | 21 |
gonad primordium | 2.44e-13 | 21 |
external genitalia | 9.93e-13 | 22 |
hepatopancreatic ampulla | 1.25e-12 | 1 |
extrahepatic bile duct | 1.25e-12 | 1 |
common bile duct | 1.25e-12 | 1 |
duodenal papilla | 1.25e-12 | 1 |
body cavity precursor | 1.60e-09 | 54 |
reproductive structure | 1.17e-08 | 59 |
reproductive system | 1.17e-08 | 59 |
bile duct | 1.94e-08 | 6 |
digestive system duct | 1.94e-08 | 6 |
body cavity | 2.24e-08 | 46 |
anatomical cavity | 2.37e-08 | 61 |
body cavity or lining | 7.74e-08 | 49 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.47e-23 | 2 |
carcinoma | 2.06e-13 | 106 |
cystadenocarcinoma | 1.75e-12 | 1 |
mucinous cystadenocarcinoma | 1.75e-12 | 1 |
adenocarcinoma | 5.99e-11 | 25 |
cell type cancer | 1.70e-09 | 143 |
germ cell and embryonal cancer | 1.88e-08 | 22 |
germ cell cancer | 1.88e-08 | 22 |