FFCP PHASE1:Hg19::chr4:74735469..74735477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:74735469..74735477,- | |||
|description=CAGE_peak_at_chr4:74735469..74735477,- | |description=CAGE_peak_at_chr4:74735469..74735477,- | ||
|id=chr4:74735469..74735477,- | |id=chr4:74735469..74735477,- | ||
|ontology_enrichment_celltype=CL:0000359!2.86e-18!32;CL:0000192!1.21e-12!42;CL:0000514!1.21e-12!42;CL:0000680!4.76e-11!57;CL:0000056!4.76e-11!57;CL:0000355!4.76e-11!57;CL:0000187!8.67e-11!54;CL:0000183!1.80e-10!59;CL:0002539!4.52e-10!10;CL:0000222!5.98e-10!119;CL:0000393!3.63e-09!60;CL:0000211!3.63e-09!60 | |ontology_enrichment_celltype=CL:0000359!2.86e-18!32;CL:0000192!1.21e-12!42;CL:0000514!1.21e-12!42;CL:0000680!4.76e-11!57;CL:0000056!4.76e-11!57;CL:0000355!4.76e-11!57;CL:0000187!8.67e-11!54;CL:0000183!1.80e-10!59;CL:0002539!4.52e-10!10;CL:0000222!5.98e-10!119;CL:0000393!3.63e-09!60;CL:0000211!3.63e-09!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.07e-33;32!CL:0002593;9.54e-25;2!CL:0002595;4.26e-22;5!CL:0000192;5.74e-19;43!CL:0002592;1.61e-16;3!CL:0002594;1.23e-12;4!CL:0000393;4.94e-10;61!CL:0000211;4.94e-10;61!CL:0000187;7.31e-10;55!CL:0002589;3.81e-07;2!CL:0002494;3.93e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.81e-35,32;CL:0000192,5.74e-26,43;CL:0000514,5.74e-26,43;CL:0002593,1.85e-24,2;CL:0002595,6.32e-22,5;CL:0000187,4.79e-20,55;CL:0000680,6.01e-19,58;CL:0000056,6.01e-19,58;CL:0000355,6.01e-19,58;CL:0000393,5.90e-18,61;CL:0000211,5.90e-18,61;CL:0002592,1.49e-16,3;CL:0002594,9.20e-13,4;CL:0000222,2.94e-10,121;CL:0002494,3.50e-07,16;CL:0002589,3.70e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;5.74e-19;43!CL:0000355;4.04e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.34e-19!42;UBERON:0003509!1.34e-19!42;UBERON:0004572!1.34e-19!42;UBERON:0000055!1.82e-19!69;UBERON:0004872!1.87e-19!84;UBERON:0001981!1.25e-18!60;UBERON:0007500!1.25e-18!60;UBERON:0004537!1.25e-18!60;UBERON:0006965!1.25e-18!60;UBERON:0002049!4.17e-17!79;UBERON:0007798!4.17e-17!79;UBERON:0004573!2.53e-15!33;UBERON:0004571!2.53e-15!33;UBERON:0004535!8.63e-15!110;UBERON:0001009!3.97e-14!113;UBERON:0003914!3.85e-11!118;UBERON:0004237!4.52e-10!10;UBERON:0004695!4.52e-10!10;UBERON:0002111!4.52e-10!10;UBERON:0004178!4.52e-10!10;UBERON:0001134!6.01e-10!61;UBERON:0002036!6.01e-10!61;UBERON:0003082!6.01e-10!61;UBERON:0000486!1.59e-09!82;UBERON:0002385!1.88e-09!63;UBERON:0001015!1.88e-09!63;UBERON:0000383!1.88e-09!63;UBERON:0000914!3.94e-09!83;UBERON:0002329!3.94e-09!83;UBERON:0003077!3.94e-09!83;UBERON:0003059!3.94e-09!83;UBERON:0007282!3.94e-09!83;UBERON:0009618!3.94e-09!83;UBERON:0007285!3.94e-09!83;UBERON:0003081!1.06e-08!216;UBERON:0002204!1.11e-08!167;UBERON:0004290!5.85e-08!70;UBERON:0000947!8.73e-07!21;UBERON:0010191!8.73e-07!21 | |ontology_enrichment_uberon=UBERON:0001637!1.34e-19!42;UBERON:0003509!1.34e-19!42;UBERON:0004572!1.34e-19!42;UBERON:0000055!1.82e-19!69;UBERON:0004872!1.87e-19!84;UBERON:0001981!1.25e-18!60;UBERON:0007500!1.25e-18!60;UBERON:0004537!1.25e-18!60;UBERON:0006965!1.25e-18!60;UBERON:0002049!4.17e-17!79;UBERON:0007798!4.17e-17!79;UBERON:0004573!2.53e-15!33;UBERON:0004571!2.53e-15!33;UBERON:0004535!8.63e-15!110;UBERON:0001009!3.97e-14!113;UBERON:0003914!3.85e-11!118;UBERON:0004237!4.52e-10!10;UBERON:0004695!4.52e-10!10;UBERON:0002111!4.52e-10!10;UBERON:0004178!4.52e-10!10;UBERON:0001134!6.01e-10!61;UBERON:0002036!6.01e-10!61;UBERON:0003082!6.01e-10!61;UBERON:0000486!1.59e-09!82;UBERON:0002385!1.88e-09!63;UBERON:0001015!1.88e-09!63;UBERON:0000383!1.88e-09!63;UBERON:0000914!3.94e-09!83;UBERON:0002329!3.94e-09!83;UBERON:0003077!3.94e-09!83;UBERON:0003059!3.94e-09!83;UBERON:0007282!3.94e-09!83;UBERON:0009618!3.94e-09!83;UBERON:0007285!3.94e-09!83;UBERON:0003081!1.06e-08!216;UBERON:0002204!1.11e-08!167;UBERON:0004290!5.85e-08!70;UBERON:0000947!8.73e-07!21;UBERON:0010191!8.73e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;9.54e-25;2!UBERON:0003834;4.26e-22;5!UBERON:0001533;4.26e-22;5!UBERON:0001637;1.93e-19;42!UBERON:0003509;1.93e-19;42!UBERON:0004572;1.93e-19;42!UBERON:0004573;7.80e-19;33!UBERON:0004571;7.80e-19;33!UBERON:0003498;1.61e-16;3!UBERON:0005985;1.61e-16;3!UBERON:0001621;1.61e-16;3!UBERON:0003513;5.68e-16;7!UBERON:0001310;1.23e-12;4!UBERON:0007500;2.34e-10;56!UBERON:0001981;2.34e-10;56!UBERON:0004537;2.34e-10;56!UBERON:0000055;1.18e-08;65!UBERON:0003914;4.26e-08;74!UBERON:0002049;1.57e-07;75!UBERON:0007798;1.57e-07;75!UBERON:0001529;3.81e-07;2!UBERON:0007204;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.30e-26,42;UBERON:0003509,1.30e-26,42;UBERON:0004572,1.30e-26,42;UBERON:0002456,1.85e-24,2;UBERON:0003834,6.32e-22,5;UBERON:0001533,6.32e-22,5;UBERON:0004573,7.30e-22,33;UBERON:0004571,7.30e-22,33;UBERON:0007500,1.32e-18,59;UBERON:0001981,1.32e-18,59;UBERON:0004537,1.32e-18,59;UBERON:0006965,1.32e-18,59;UBERON:0001134,1.20e-17,62;UBERON:0002036,1.20e-17,62;UBERON:0003082,1.20e-17,62;UBERON:0002385,4.67e-17,64;UBERON:0001015,4.67e-17,64;UBERON:0000383,4.67e-17,64;UBERON:0001621,1.49e-16,3;UBERON:0000055,5.56e-16,68;UBERON:0003513,7.51e-16,7;UBERON:0004872,1.13e-15,83;UBERON:0000486,1.27e-15,83;UBERON:0002329,2.97e-15,71;UBERON:0003059,2.97e-15,71;UBERON:0007282,2.97e-15,71;UBERON:0004290,2.97e-15,71;UBERON:0009618,2.97e-15,71;UBERON:0003077,5.03e-15,72;UBERON:0007285,5.03e-15,72;UBERON:0007524,8.40e-15,73;UBERON:0002049,8.98e-14,78;UBERON:0007503,8.98e-14,78;UBERON:0007798,8.98e-14,78;UBERON:0001310,9.20e-13,4;UBERON:0004535,1.37e-11,109;UBERON:0001009,3.06e-11,112;UBERON:0003914,1.07e-10,117;UBERON:0003498,2.59e-10,5;UBERON:0005985,2.59e-10,5;UBERON:0002204,2.09e-08,167;UBERON:0005256,2.44e-08,122;UBERON:0001529,3.70e-07,2;UBERON:0007204,3.70e-07,2 | |||
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|short_description=p@chr4:74735469..74735477,- | |short_description=p@chr4:74735469..74735477,- | ||
}} | }} |
Latest revision as of 06:45, 30 July 2015
Short description: | p@chr4:74735469..74735477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74735469..74735477, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.81e-35 | 32 |
smooth muscle cell | 5.74e-26 | 43 |
smooth muscle myoblast | 5.74e-26 | 43 |
smooth muscle cell of the internal thoracic artery | 1.85e-24 | 2 |
smooth muscle cell of the subclavian artery | 6.32e-22 | 5 |
muscle cell | 4.79e-20 | 55 |
muscle precursor cell | 6.01e-19 | 58 |
myoblast | 6.01e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.01e-19 | 58 |
electrically responsive cell | 5.90e-18 | 61 |
electrically active cell | 5.90e-18 | 61 |
smooth muscle cell of the coronary artery | 1.49e-16 | 3 |
smooth muscle cell of the umbilical artery | 9.20e-13 | 4 |
mesodermal cell | 2.94e-10 | 121 |
cardiocyte | 3.50e-07 | 16 |
smooth muscle cell of the brachiocephalic vasculature | 3.70e-07 | 2 |