FFCP PHASE1:Hg19::chr4:74702384..74702402,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6372 | |EntrezGene=6372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10643 | |HGNC=10643 | ||
|TSSclassifier=strong | |||
|UniProt=D6RF92 | |UniProt=D6RF92 | ||
|association_with_transcript=27bp_to_ENST00000515050_5end | |association_with_transcript=27bp_to_ENST00000515050_5end | ||
|cluster_id=chr4:74702384..74702402,+ | |||
|coexpression_cluster_id=C1524 | |||
|description=CAGE_peak_1_at_CXCL6_5end | |description=CAGE_peak_1_at_CXCL6_5end | ||
|id=chr4:74702384..74702402,+ | |id=chr4:74702384..74702402,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.50e-29!180;CL:0000680!1.52e-24!57;CL:0000056!1.52e-24!57;CL:0000355!1.52e-24!57;CL:0000393!1.41e-23!60;CL:0000211!1.41e-23!60;CL:0000183!1.83e-23!59;CL:0000187!7.59e-23!54;CL:0000359!3.76e-22!32;CL:0000192!3.01e-19!42;CL:0000514!3.01e-19!42;CL:0000222!5.42e-19!119;CL:0000220!6.12e-17!246;CL:0002321!1.07e-16!248;CL:0002371!7.20e-13!591;CL:0002494!5.70e-11!16;CL:0000144!7.02e-11!625;CL:0002539!9.34e-09!10;CL:0000057!1.74e-08!75 | |ontology_enrichment_celltype=CL:0000055!3.50e-29!180;CL:0000680!1.52e-24!57;CL:0000056!1.52e-24!57;CL:0000355!1.52e-24!57;CL:0000393!1.41e-23!60;CL:0000211!1.41e-23!60;CL:0000183!1.83e-23!59;CL:0000187!7.59e-23!54;CL:0000359!3.76e-22!32;CL:0000192!3.01e-19!42;CL:0000514!3.01e-19!42;CL:0000222!5.42e-19!119;CL:0000220!6.12e-17!246;CL:0002321!1.07e-16!248;CL:0002371!7.20e-13!591;CL:0002494!5.70e-11!16;CL:0000144!7.02e-11!625;CL:0002539!9.34e-09!10;CL:0000057!1.74e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.19e-24;32!CL:0000192;2.27e-15;43!CL:0000187;1.37e-13;55!CL:0000393;5.83e-13;61!CL:0000211;5.83e-13;61!CL:0002494;1.26e-12;16!CL:0002539;4.77e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.32e-27,58;CL:0000056,6.32e-27,58;CL:0000355,6.32e-27,58;CL:0000359,7.63e-26,32;CL:0000393,2.54e-25,61;CL:0000211,2.54e-25,61;CL:0000187,6.02e-25,55;CL:0000192,2.64e-21,43;CL:0000514,2.64e-21,43;CL:0000222,1.07e-20,121;CL:0002321,1.01e-16,250;CL:0002494,1.19e-12,16;CL:0002539,4.81e-10,10;CL:0000048,2.40e-08,427;CL:0000057,3.59e-08,76;CL:0000723,1.16e-07,433;CL:0000034,5.16e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.27e-15;43!CL:0000355;1.14e-14;58 | |||
|ontology_enrichment_disease=DOID:2394!3.05e-08!14 | |ontology_enrichment_disease=DOID:2394!3.05e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.25e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.27e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.46e-29!84;UBERON:0002049!9.81e-27!79;UBERON:0007798!9.81e-27!79;UBERON:0001009!7.39e-25!113;UBERON:0000486!8.51e-25!82;UBERON:0001637!9.87e-25!42;UBERON:0003509!9.87e-25!42;UBERON:0004572!9.87e-25!42;UBERON:0004535!1.18e-24!110;UBERON:0003914!4.35e-24!118;UBERON:0001981!1.69e-22!60;UBERON:0007500!1.69e-22!60;UBERON:0004537!1.69e-22!60;UBERON:0006965!1.69e-22!60;UBERON:0000055!3.06e-22!69;UBERON:0000914!4.66e-22!83;UBERON:0002329!4.66e-22!83;UBERON:0003077!4.66e-22!83;UBERON:0003059!4.66e-22!83;UBERON:0007282!4.66e-22!83;UBERON:0009618!4.66e-22!83;UBERON:0007285!4.66e-22!83;UBERON:0004290!9.44e-22!70;UBERON:0001134!9.52e-22!61;UBERON:0002036!9.52e-22!61;UBERON:0003082!9.52e-22!61;UBERON:0002385!2.85e-21!63;UBERON:0001015!2.85e-21!63;UBERON:0000383!2.85e-21!63;UBERON:0005256!6.20e-21!143;UBERON:0004573!4.44e-20!33;UBERON:0004571!4.44e-20!33;UBERON:0000490!9.23e-17!138;UBERON:0000119!2.03e-14!312;UBERON:0000483!2.07e-14!309;UBERON:0002100!4.95e-14!216;UBERON:0000477!1.96e-13!286;UBERON:0000481!1.09e-12!347;UBERON:0004111!1.28e-12!241;UBERON:0000475!2.30e-12!365;UBERON:0003104!1.32e-11!238;UBERON:0009142!1.32e-11!238;UBERON:0000947!3.22e-11!21;UBERON:0010191!3.22e-11!21;UBERON:0000948!2.25e-10!24;UBERON:0005498!2.25e-10!24;UBERON:0004140!2.25e-10!24;UBERON:0009881!2.25e-10!24;UBERON:0004141!2.25e-10!24;UBERON:0003084!2.25e-10!24;UBERON:0007005!2.25e-10!24;UBERON:0004139!2.25e-10!24;UBERON:0004291!2.25e-10!24;UBERON:0007100!2.76e-10!27;UBERON:0000468!3.68e-09!659;UBERON:0004237!9.34e-09!10;UBERON:0004695!9.34e-09!10;UBERON:0002111!9.34e-09!10;UBERON:0004178!9.34e-09!10;UBERON:0000467!9.62e-09!625;UBERON:0000025!9.89e-09!194;UBERON:0000480!1.35e-08!626;UBERON:0003103!2.45e-08!69;UBERON:0000926!3.78e-08!448;UBERON:0004120!3.78e-08!448;UBERON:0006603!3.78e-08!448;UBERON:0001135!7.80e-08!15;UBERON:0000922!8.47e-07!612 | |ontology_enrichment_uberon=UBERON:0004872!5.46e-29!84;UBERON:0002049!9.81e-27!79;UBERON:0007798!9.81e-27!79;UBERON:0001009!7.39e-25!113;UBERON:0000486!8.51e-25!82;UBERON:0001637!9.87e-25!42;UBERON:0003509!9.87e-25!42;UBERON:0004572!9.87e-25!42;UBERON:0004535!1.18e-24!110;UBERON:0003914!4.35e-24!118;UBERON:0001981!1.69e-22!60;UBERON:0007500!1.69e-22!60;UBERON:0004537!1.69e-22!60;UBERON:0006965!1.69e-22!60;UBERON:0000055!3.06e-22!69;UBERON:0000914!4.66e-22!83;UBERON:0002329!4.66e-22!83;UBERON:0003077!4.66e-22!83;UBERON:0003059!4.66e-22!83;UBERON:0007282!4.66e-22!83;UBERON:0009618!4.66e-22!83;UBERON:0007285!4.66e-22!83;UBERON:0004290!9.44e-22!70;UBERON:0001134!9.52e-22!61;UBERON:0002036!9.52e-22!61;UBERON:0003082!9.52e-22!61;UBERON:0002385!2.85e-21!63;UBERON:0001015!2.85e-21!63;UBERON:0000383!2.85e-21!63;UBERON:0005256!6.20e-21!143;UBERON:0004573!4.44e-20!33;UBERON:0004571!4.44e-20!33;UBERON:0000490!9.23e-17!138;UBERON:0000119!2.03e-14!312;UBERON:0000483!2.07e-14!309;UBERON:0002100!4.95e-14!216;UBERON:0000477!1.96e-13!286;UBERON:0000481!1.09e-12!347;UBERON:0004111!1.28e-12!241;UBERON:0000475!2.30e-12!365;UBERON:0003104!1.32e-11!238;UBERON:0009142!1.32e-11!238;UBERON:0000947!3.22e-11!21;UBERON:0010191!3.22e-11!21;UBERON:0000948!2.25e-10!24;UBERON:0005498!2.25e-10!24;UBERON:0004140!2.25e-10!24;UBERON:0009881!2.25e-10!24;UBERON:0004141!2.25e-10!24;UBERON:0003084!2.25e-10!24;UBERON:0007005!2.25e-10!24;UBERON:0004139!2.25e-10!24;UBERON:0004291!2.25e-10!24;UBERON:0007100!2.76e-10!27;UBERON:0000468!3.68e-09!659;UBERON:0004237!9.34e-09!10;UBERON:0004695!9.34e-09!10;UBERON:0002111!9.34e-09!10;UBERON:0004178!9.34e-09!10;UBERON:0000467!9.62e-09!625;UBERON:0000025!9.89e-09!194;UBERON:0000480!1.35e-08!626;UBERON:0003103!2.45e-08!69;UBERON:0000926!3.78e-08!448;UBERON:0004120!3.78e-08!448;UBERON:0006603!3.78e-08!448;UBERON:0001135!7.80e-08!15;UBERON:0000922!8.47e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.52e-20;33!UBERON:0004571;2.52e-20;33!UBERON:0001637;9.32e-19;42!UBERON:0003509;9.32e-19;42!UBERON:0004572;9.32e-19;42!UBERON:0007500;2.97e-13;56!UBERON:0001981;2.97e-13;56!UBERON:0004537;2.97e-13;56!UBERON:0002049;3.03e-12;75!UBERON:0007798;3.03e-12;75!UBERON:0000947;3.70e-12;21!UBERON:0010191;3.70e-12;21!UBERON:0000055;3.13e-11;65!UBERON:0003914;1.55e-10;74!UBERON:0004237;4.77e-10;10!UBERON:0004695;4.77e-10;10!UBERON:0002111;4.77e-10;10!UBERON:0004178;4.77e-10;10!UBERON:0000948;1.50e-09;22!UBERON:0002385;1.79e-09;31!UBERON:0001015;1.79e-09;31!UBERON:0000383;1.79e-09;31!UBERON:0001135;3.43e-09;15!UBERON:0007100;2.66e-08;25!UBERON:0004535;5.53e-07;109!UBERON:0001009;7.01e-07;112 | |||
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| ||
|short_description=p1@CXCL6 | |short_description=p1@CXCL6 | ||
}} | }} |
Latest revision as of 14:38, 18 September 2015
Short description: | p1@CXCL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCL6_5end |
Coexpression cluster: | C1524_Smooth_mesenchymal_Chondrocyte_Aortic_Synoviocyte_Preadipocyte_tenocyte |
Association with transcript: | 27bp_to_ENST00000515050_5end |
EntrezGene: | CXCL6 |
HGNC: | 10643 |
UniProt: | D6RF92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.32e-27 | 58 |
myoblast | 6.32e-27 | 58 |
multi-potent skeletal muscle stem cell | 6.32e-27 | 58 |
vascular associated smooth muscle cell | 7.63e-26 | 32 |
electrically responsive cell | 2.54e-25 | 61 |
electrically active cell | 2.54e-25 | 61 |
muscle cell | 6.02e-25 | 55 |
smooth muscle cell | 2.64e-21 | 43 |
smooth muscle myoblast | 2.64e-21 | 43 |
mesodermal cell | 1.07e-20 | 121 |
embryonic cell | 1.01e-16 | 250 |
cardiocyte | 1.19e-12 | 16 |
aortic smooth muscle cell | 4.81e-10 | 10 |
multi fate stem cell | 2.40e-08 | 427 |
fibroblast | 3.59e-08 | 76 |
somatic stem cell | 1.16e-07 | 433 |
stem cell | 5.16e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.27e-09 | 14 |