FFCP PHASE1:Hg19::chr9:5621474..5621483,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:5621474..5621483,- | |||
|description=CAGE_peak_at_chr9:5621474..5621483,- | |description=CAGE_peak_at_chr9:5621474..5621483,- | ||
|id=chr9:5621474..5621483,- | |id=chr9:5621474..5621483,- | ||
|ontology_enrichment_celltype=CL:0000359!1.27e-07!32 | |ontology_enrichment_celltype=CL:0000359!1.27e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.99e-08;32!CL:0000322;3.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.60e-08,32;CL:0000322,3.32e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.26e-15!14;DOID:193!1.93e-08!29;DOID:120!4.34e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.99e-40;14!DOID:193;1.39e-21;29!DOID:120;1.29e-19;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.51e-39,14;DOID:193,2.14e-21,29;DOID:120,1.89e-19,27 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.71e-10!9;UBERON:0004573!8.42e-08!33;UBERON:0004571!8.42e-08!33;UBERON:0001637!9.39e-08!42;UBERON:0003509!9.39e-08!42;UBERON:0004572!9.39e-08!42;UBERON:0000992!2.27e-07!13;UBERON:0002118!2.59e-07!5;UBERON:0004532!2.59e-07!5;UBERON:0001557!6.64e-07!19 | |ontology_enrichment_uberon=UBERON:0001737!3.71e-10!9;UBERON:0004573!8.42e-08!33;UBERON:0004571!8.42e-08!33;UBERON:0001637!9.39e-08!42;UBERON:0003509!9.39e-08!42;UBERON:0004572!9.39e-08!42;UBERON:0000992!2.27e-07!13;UBERON:0002118!2.59e-07!5;UBERON:0004532!2.59e-07!5;UBERON:0001557!6.64e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.61e-17;13!UBERON:0002118;8.52e-16;5!UBERON:0000991;1.57e-13;21!UBERON:0002119;3.71e-11;4!UBERON:0004821;3.41e-07;3!UBERON:0007499;3.41e-07;3!UBERON:0003215;3.41e-07;3!UBERON:0010368;3.41e-07;3!UBERON:0009911;3.41e-07;3!UBERON:0002299;3.41e-07;3!UBERON:0006524;3.41e-07;3!UBERON:0008874;3.41e-07;3!UBERON:0002169;3.41e-07;3!UBERON:0004894;3.41e-07;3!UBERON:0003513;7.53e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,4.44e-17,13;UBERON:0002118,1.77e-15,5;UBERON:0000991,1.83e-13,21;UBERON:0009196,1.83e-13,21;UBERON:0009117,1.83e-13,21;UBERON:0005564,1.83e-13,21;UBERON:0004176,8.52e-13,22;UBERON:0002119,2.52e-11,4;UBERON:0001048,2.04e-08,160;UBERON:0001637,7.77e-08,42;UBERON:0003509,7.77e-08,42;UBERON:0004572,7.77e-08,42;UBERON:0004821,3.32e-07,3;UBERON:0003215,3.32e-07,3;UBERON:0010368,3.32e-07,3;UBERON:0009911,3.32e-07,3;UBERON:0002299,3.32e-07,3;UBERON:0006524,3.32e-07,3;UBERON:0008874,3.32e-07,3;UBERON:0002169,3.32e-07,3;UBERON:0004894,3.32e-07,3;UBERON:0003513,5.69e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0,1.47440361900905,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872389432677388,0,0.727752183563449,0,0,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47461838108027,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.354920400119532,1.01150814046861,0.241011029883482,0.330881918197182,0.871517776369625,1.42362371466658,0.943819157121151,0.392442930250692,2.30848294167834,0,2.80483547606892,0,0,0,0,0.590789906681404,0,0,1.71567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.857867961948885,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.602878754119172,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0.553107505625109,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,1.40354529212299,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,14.4615536859744,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.638063562472921,0.30347334256665,1.85938219718914,1.88887408098384,0,0.308033580176089,0.532306030317022,0.869932992075073,0.37064843820784,3.2918723950658,0,0,0,0,0,0.636406495851874,3.13979456079692,0,0,0,1.2130948894399,0,0.421258456238981,0,0.487426979262569,2.11300293513511,0.136499911407986,0,0,0,1.99031692572366,0.876901770507525,0,0,1.21746226177622,0,0,0,0,0.7133421029625,0,0,0,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0.341380344856499,1.27126825146383,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0.522355239482415,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.721429382263803,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0.447764408660622,0,0.554805861502613,0,0,0,0,0,0,0,1.43367090447332,1.34940933649081,0.776314784381297,1.65882483136342,3.45594228925393,1.04349012362347,5.40927392389986,3.04644169735036,1.22061219961398,0.727394636810238,2.04080058380728,2.78420255927096,1.19428766609585,1.60011105865261,0,0,1.26184898228651,0.385239660814607,0,0,0.226705925512272,0.926089897295336,0,0,0,0,0.883445729729405,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,11.0597808939174,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0,0,14.8990037940849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0,9.71143255781842,0.615976841137482,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.372448285775147,0.112131862580613,0,0,0.435433495793923,0,0,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0,1.47440361900905,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872389432677388,0,0.727752183563449,0,0,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47461838108027,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.354920400119532,1.01150814046861,0.241011029883482,0.330881918197182,0.871517776369625,1.42362371466658,0.943819157121151,0.392442930250692,2.30848294167834,0,2.80483547606892,0,0,0,0,0.590789906681404,0,0,1.71567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.857867961948885,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.602878754119172,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0.553107505625109,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,1.40354529212299,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,14.4615536859744,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.638063562472921,0.30347334256665,1.85938219718914,1.88887408098384,0,0.308033580176089,0.532306030317022,0.869932992075073,0.37064843820784,3.2918723950658,0,0,0,0,0,0.636406495851874,3.13979456079692,0,0,0,1.2130948894399,0,0.421258456238981,0,0.487426979262569,2.11300293513511,0.136499911407986,0,0,0,1.99031692572366,0.876901770507525,0,0,1.21746226177622,0,0,0,0,0.7133421029625,0,0,0,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0.341380344856499,1.27126825146383,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0.522355239482415,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.721429382263803,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0.447764408660622,0,0.554805861502613,0,0,0,0,0,0,0,1.43367090447332,1.34940933649081,0.776314784381297,1.65882483136342,3.45594228925393,1.04349012362347,5.40927392389986,3.04644169735036,1.22061219961398,0.727394636810238,2.04080058380728,2.78420255927096,1.19428766609585,1.60011105865261,0,0,1.26184898228651,0.385239660814607,0,0,0.226705925512272,0.926089897295336,0,0,0,0,0.883445729729405,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,11.0597808939174,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0,0,14.8990037940849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0,9.71143255781842,0.615976841137482,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.372448285775147,0.112131862580613,0,0,0.435433495793923,0,0,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:5621474..5621483,- | |short_description=p@chr9:5621474..5621483,- | ||
}} | }} |
Latest revision as of 02:13, 1 August 2015
Short description: | p@chr9:5621474..5621483, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:5621474..5621483, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.60e-08 | 32 |
pneumocyte | 3.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female gonad | 4.44e-17 | 13 |
right ovary | 1.77e-15 | 5 |
gonad | 1.83e-13 | 21 |
indifferent external genitalia | 1.83e-13 | 21 |
indifferent gonad | 1.83e-13 | 21 |
gonad primordium | 1.83e-13 | 21 |
external genitalia | 8.52e-13 | 22 |
left ovary | 2.52e-11 | 4 |
primordium | 2.04e-08 | 160 |
artery | 7.77e-08 | 42 |
arterial blood vessel | 7.77e-08 | 42 |
arterial system | 7.77e-08 | 42 |
pulmonary alveolus epithelium | 3.32e-07 | 3 |
alveolus | 3.32e-07 | 3 |
pulmonary lobule | 3.32e-07 | 3 |
lobule | 3.32e-07 | 3 |
alveolus of lung | 3.32e-07 | 3 |
alveolar system | 3.32e-07 | 3 |
pulmonary acinus | 3.32e-07 | 3 |
alveolar sac | 3.32e-07 | 3 |
alveolar wall | 3.32e-07 | 3 |
trunk blood vessel | 5.69e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.51e-39 | 14 |
reproductive organ cancer | 2.14e-21 | 29 |
female reproductive organ cancer | 1.89e-19 | 27 |