FFCP PHASE1:Hg19::chr4:38325054..38325059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:38325054..38325059,- | |||
|description=CAGE_peak_at_chr4:38325054..38325059,- | |description=CAGE_peak_at_chr4:38325054..38325059,- | ||
|id=chr4:38325054..38325059,- | |id=chr4:38325054..38325059,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;8.95e-10;3!CL:0000037;2.35e-08;1!CL:0001024;2.35e-08;1!CL:0002032;5.97e-08;1!CL:0000222;5.97e-08;1!CL:1001319;5.97e-08;1!CL:1000600;5.97e-08;1!CL:0000557;5.97e-08;1!CL:0002202;3.77e-07;9!CL:0002632;3.77e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,9.81e-10,3;CL:0000069,9.81e-10,3;CL:0000307,9.81e-10,3;CL:0000377,9.81e-10,3;CL:0001024,2.71e-08,1;CL:1001319,1.06e-07,1;CL:1000600,1.06e-07,1;CL:0002202,4.34e-07,9;CL:0002632,4.34e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;8.95e-10;3 | |||
|ontology_enrichment_disease=DOID:162!6.79e-25!235;DOID:14566!9.21e-24!239;DOID:0050687!9.27e-15!143;DOID:305!1.14e-12!106;DOID:0050686!1.07e-11!137 | |ontology_enrichment_disease=DOID:162!6.79e-25!235;DOID:14566!9.21e-24!239;DOID:0050687!9.27e-15!143;DOID:305!1.14e-12!106;DOID:0050686!1.07e-11!137 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.49e-08;8!DOID:3112;5.97e-08;1!DOID:171;9.81e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.12e-08,8;DOID:3112,3.34e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;4.01e-09;18!UBERON:0004645;5.97e-08;1!UBERON:0001256;5.97e-08;1!UBERON:0001259;5.97e-08;1!UBERON:0002346;9.78e-08;4!UBERON:0000923;9.78e-08;4!UBERON:0010316;9.78e-08;4!UBERON:0005291;9.78e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.06e-07,1;UBERON:0001256,1.06e-07,1;UBERON:0001259,1.06e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0.410502947249729,0.0787107813136792,0,0.383829398097213,0,0,0,1.10926203050036,0.154934401160603,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,0.380508304469197,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,1.00726411300178,0.907604499126468,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0.185803175125719,0.432807638929335,0.213425530045242,0.478278818186467,0.199579371432817,0,0,0,0.280797178113459,0.456469358066384,0,0,0.846458889008016,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0.254253650292766,0.236387681767936,0,0.874813840149763,0,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0,0.455768223388005,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,7.5901493089674,1.58936578980379,0,0,0.282706142867882,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,1.30588809870604,0,0.343972064943233,0.483781656445426,0.146178634172371,0.0821154570532092,0,0,0,1.50746117111426,0.19871461170299,0,0,0.320635281006135,0,0,0.144090417154106,0.229073192331831,0.171594997861965,0.14405479798815,0.124252535565433,0,2.98989253361951,2.61507115780833,5.09991088181609,0.288950589901519,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0.550157746388935,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,2.46277562248017,0,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,1.36484205787483,0.856396000634902,0.235265819698172,0,0,0.597019211547496,0,0.554805861502613,0.189403005275089,0,1.77962244319307,0,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0.310525913752519,0,0,0,0.300515217994437,0.761610424337591,0.406870733204662,0,0.214821114084977,0,0,0.400027764663154,0,0.673498977531838,1.26184898228651,0.192619830407303,0.428883182749851,0.260994291965212,0,0.231522474323834,0.244736704506468,0,0,0,0,0.192914038270915,0.506827321959218,1.28120759293973,0,0,0,0,0,0.163565394255844,0,0.737318726261158,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,5.97610579052406,0.109209638192014,0.169732529954025,1.2754495206101,2.60265104943905,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,1.29766695682514,0,0.924205329202706,0,0,1.19349733269765,0,0,0,0,1.63771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0.345701962667338,0,0,0,1.65471377237555,0.333694205676207,0,0,0,0,1.07963795609311,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.218531143927391,0.253397002022874,0.101988829741982,0,0,0,0,0.535928260312357,0,0.103432995861895,0,0,0.0645889098360061,0,1.00918676322552,0,0,0,0,0,0,0,1.05824249194267,0,0,0.988077223172456,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0.410502947249729,0.0787107813136792,0,0.383829398097213,0,0,0,1.10926203050036,0.154934401160603,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,0.380508304469197,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,1.00726411300178,0.907604499126468,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0.185803175125719,0.432807638929335,0.213425530045242,0.478278818186467,0.199579371432817,0,0,0,0.280797178113459,0.456469358066384,0,0,0.846458889008016,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0.254253650292766,0.236387681767936,0,0.874813840149763,0,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0,0.455768223388005,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,7.5901493089674,1.58936578980379,0,0,0.282706142867882,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,1.30588809870604,0,0.343972064943233,0.483781656445426,0.146178634172371,0.0821154570532092,0,0,0,1.50746117111426,0.19871461170299,0,0,0.320635281006135,0,0,0.144090417154106,0.229073192331831,0.171594997861965,0.14405479798815,0.124252535565433,0,2.98989253361951,2.61507115780833,5.09991088181609,0.288950589901519,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0.550157746388935,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,2.46277562248017,0,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,1.36484205787483,0.856396000634902,0.235265819698172,0,0,0.597019211547496,0,0.554805861502613,0.189403005275089,0,1.77962244319307,0,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0.310525913752519,0,0,0,0.300515217994437,0.761610424337591,0.406870733204662,0,0.214821114084977,0,0,0.400027764663154,0,0.673498977531838,1.26184898228651,0.192619830407303,0.428883182749851,0.260994291965212,0,0.231522474323834,0.244736704506468,0,0,0,0,0.192914038270915,0.506827321959218,1.28120759293973,0,0,0,0,0,0.163565394255844,0,0.737318726261158,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,5.97610579052406,0.109209638192014,0.169732529954025,1.2754495206101,2.60265104943905,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,1.29766695682514,0,0.924205329202706,0,0,1.19349733269765,0,0,0,0,1.63771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0.345701962667338,0,0,0,1.65471377237555,0.333694205676207,0,0,0,0,1.07963795609311,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.218531143927391,0.253397002022874,0.101988829741982,0,0,0,0,0.535928260312357,0,0.103432995861895,0,0,0.0645889098360061,0,1.00918676322552,0,0,0,0,0,0,0,1.05824249194267,0,0,0.988077223172456,0,0,0,0,0,0 | ||
|short_description=p@chr4:38325054..38325059,- | |short_description=p@chr4:38325054..38325059,- | ||
}} | }} |
Latest revision as of 04:57, 30 July 2015
Short description: | p@chr4:38325054..38325059, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:38325054..38325059, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 9.81e-10 | 3 |
branched duct epithelial cell | 9.81e-10 | 3 |
tracheal epithelial cell | 9.81e-10 | 3 |
tracheoblast | 9.81e-10 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.71e-08 | 1 |
bladder cell | 1.06e-07 | 1 |
lower urinary tract cell | 1.06e-07 | 1 |
epithelial cell of tracheobronchial tree | 4.34e-07 | 9 |
epithelial cell of lower respiratory tract | 4.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.06e-07 | 1 |
wall of urinary bladder | 1.06e-07 | 1 |
mucosa of urinary bladder | 1.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.12e-08 | 8 |
papillary adenocarcinoma | 3.34e-08 | 1 |