FFCP PHASE1:Hg19::chr9:139869524..139869539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5730 | |EntrezGene=5730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=9592 | |HGNC=9592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_uc004ckd.2_5end | |association_with_transcript=-6bp_to_uc004ckd.2_5end | ||
|cluster_id=chr9:139869524..139869539,+ | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_7_at_PTGDS_5end | |description=CAGE_peak_7_at_PTGDS_5end | ||
|id=chr9:139869524..139869539,+ | |id=chr9:139869524..139869539,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.01e-25!18;CL:0000789!2.01e-25!18;CL:0002420!2.01e-25!18;CL:0002419!2.01e-25!18;CL:0000790!2.01e-25!18;CL:0000084!5.01e-19!25;CL:0000827!5.01e-19!25;CL:0000625!7.36e-19!11;CL:0000738!4.48e-15!140;CL:0002087!2.55e-13!119;CL:0000037!2.89e-10!172;CL:0000566!2.89e-10!172;CL:0000624!4.80e-10!6;CL:0002031!7.00e-10!124;CL:0000988!1.51e-09!182;CL:0000838!1.81e-09!52;CL:0000542!3.57e-09!53;CL:0000051!3.57e-09!53;CL:0002032!4.68e-08!165;CL:0000837!4.68e-08!165 | |ontology_enrichment_celltype=CL:0000791!2.01e-25!18;CL:0000789!2.01e-25!18;CL:0002420!2.01e-25!18;CL:0002419!2.01e-25!18;CL:0000790!2.01e-25!18;CL:0000084!5.01e-19!25;CL:0000827!5.01e-19!25;CL:0000625!7.36e-19!11;CL:0000738!4.48e-15!140;CL:0002087!2.55e-13!119;CL:0000037!2.89e-10!172;CL:0000566!2.89e-10!172;CL:0000624!4.80e-10!6;CL:0002031!7.00e-10!124;CL:0000988!1.51e-09!182;CL:0000838!1.81e-09!52;CL:0000542!3.57e-09!53;CL:0000051!3.57e-09!53;CL:0002032!4.68e-08!165;CL:0000837!4.68e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.68e-50;18!CL:0000789;5.68e-50;18!CL:0002419;5.68e-50;18!CL:0000625;2.40e-40;11!CL:0000084;1.35e-39;25!CL:0000624;6.31e-15;6!CL:0000623;1.15e-12;3!CL:0000542;2.51e-12;53!CL:0000226;4.13e-11;3!CL:0000842;4.13e-11;3!CL:0000767;1.12e-10;3!CL:0000094;4.98e-07;8!CL:0002087;5.49e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.92e-50,18;CL:0000789,4.92e-50,18;CL:0002420,4.92e-50,18;CL:0002419,4.92e-50,18;CL:0000790,4.92e-50,18;CL:0000625,2.69e-40,11;CL:0000084,1.18e-39,25;CL:0000827,1.18e-39,25;CL:0000838,2.99e-24,52;CL:0000542,1.08e-23,53;CL:0000051,1.08e-23,53;CL:0000738,1.91e-19,136;CL:0002087,7.01e-18,115;CL:0000624,5.06e-15,6;CL:0000037,2.75e-14,168;CL:0000988,3.54e-13,177;CL:0002031,6.51e-13,120;CL:0000623,1.15e-12,3;CL:0000825,1.15e-12,3;CL:0002032,6.55e-12,161;CL:0000837,6.55e-12,161;CL:0000226,6.54e-11,3;CL:0000842,6.54e-11,3;CL:0000767,7.52e-11,3;CL:0000094,3.94e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;5.68e-50;18!CL:0000051;2.51e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.86e-18!115;UBERON:0000178!9.49e-08!15;UBERON:0000179!9.49e-08!15;UBERON:0000463!9.49e-08!15;UBERON:0002390!6.22e-07!102;UBERON:0003061!6.22e-07!102;UBERON:0002193!9.72e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!7.86e-18!115;UBERON:0000178!9.49e-08!15;UBERON:0000179!9.49e-08!15;UBERON:0000463!9.49e-08!15;UBERON:0002390!6.22e-07!102;UBERON:0003061!6.22e-07!102;UBERON:0002193!9.72e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-17;15!UBERON:0000179;1.16e-17;15!UBERON:0000463;1.16e-17;15!UBERON:0002390;6.18e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.46e-17,15;UBERON:0000179,1.46e-17,15;UBERON:0000463,1.46e-17,15 | |||
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| ||
|short_description=p7@PTGDS | |short_description=p7@PTGDS | ||
}} | }} |
Latest revision as of 14:30, 16 September 2015
Short description: | p7@PTGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PTGDS_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | -6bp_to_uc004ckd.2_5end |
EntrezGene: | PTGDS |
HGNC: | 9592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.92e-50 | 18 |
alpha-beta T cell | 4.92e-50 | 18 |
immature T cell | 4.92e-50 | 18 |
mature T cell | 4.92e-50 | 18 |
immature alpha-beta T cell | 4.92e-50 | 18 |
CD8-positive, alpha-beta T cell | 2.69e-40 | 11 |
T cell | 1.18e-39 | 25 |
pro-T cell | 1.18e-39 | 25 |
lymphoid lineage restricted progenitor cell | 2.99e-24 | 52 |
lymphocyte | 1.08e-23 | 53 |
common lymphoid progenitor | 1.08e-23 | 53 |
leukocyte | 1.91e-19 | 136 |
nongranular leukocyte | 7.01e-18 | 115 |
CD4-positive, alpha-beta T cell | 5.06e-15 | 6 |
hematopoietic stem cell | 2.75e-14 | 168 |
hematopoietic cell | 3.54e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 6.51e-13 | 120 |
natural killer cell | 1.15e-12 | 3 |
pro-NK cell | 1.15e-12 | 3 |
hematopoietic oligopotent progenitor cell | 6.55e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.55e-12 | 161 |
single nucleate cell | 6.54e-11 | 3 |
mononuclear cell | 6.54e-11 | 3 |
basophil | 7.52e-11 | 3 |
granulocyte | 3.94e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.46e-17 | 15 |
haemolymphatic fluid | 1.46e-17 | 15 |
organism substance | 1.46e-17 | 15 |