FFCP PHASE1:Hg19::chr16:150404..150425,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:150404..150425,-
|short_description=p@chr16:150404..150425,-
|description=CAGE_peak_at_chr16:150404..150425,-
|association_with_transcript=NA
|EntrezGene...") |
No edit summary |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:150404..150425,- | |||
|description=CAGE_peak_at_chr16:150404..150425,- | |||
|id=chr16:150404..150425,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.52e-11;2!CL:0000062;1.01e-09;9!CL:0000346;5.01e-08;3!CL:1000428;5.01e-08;3!CL:0002521;5.54e-08;3!CL:0002567;7.02e-08;3!CL:0002231;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,4.49e-08,11;CL:0000375,4.49e-08,11;CL:0000335,4.49e-08,11;CL:0000346,5.18e-08,3;CL:1000428,5.18e-08,3;CL:0002521,5.54e-08,3;CL:0002231,6.78e-08,3;CL:0002567,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000335;4.04e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.01e-08;3!UBERON:0001992;5.01e-08;3!UBERON:0002190;5.54e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.18e-08,3;UBERON:0001992,5.18e-08,3;UBERON:0002190,5.54e-08,3 | |||
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| ||
|short_description=p@chr16:150404..150425,- | |||
}} | }} |
Latest revision as of 06:27, 25 July 2015
Short description: | p@chr16:150404..150425, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:150404..150425, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 4.49e-08 | 11 |
osteoprogenitor cell | 4.49e-08 | 11 |
mesenchyme condensation cell | 4.49e-08 | 11 |
hair follicle dermal papilla cell | 5.18e-08 | 3 |
stem cell of epidermis | 5.18e-08 | 3 |
subcutaneous fat cell | 5.54e-08 | 3 |
epithelial cell of prostate | 6.78e-08 | 3 |
light melanocyte | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.18e-08 | 3 |
papillary layer of dermis | 5.18e-08 | 3 |
subcutaneous adipose tissue | 5.54e-08 | 3 |