FFCP PHASE1:Hg19::chr9:136242909..136242953,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6836 | |EntrezGene=6836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11476 | |HGNC=11476 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T8U5,B7Z6A4 | |UniProt=Q5T8U5,B7Z6A4 | ||
|association_with_transcript=0bp_to_ENST00000371991,ENST00000545297_5end | |association_with_transcript=0bp_to_ENST00000371991,ENST00000545297_5end | ||
|cluster_id=chr9:136242909..136242953,- | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_1_at_SURF4_5end | |description=CAGE_peak_1_at_SURF4_5end | ||
|id=chr9:136242909..136242953,- | |id=chr9:136242909..136242953,- | ||
|ontology_enrichment_celltype=CL:0000548!7.12e-37!679;CL:0000004!7.12e-37!679;CL:0000255!7.12e-37!679;CL:0000012!3.99e-36!682;CL:0000144!4.97e-36!625;CL:0000055!1.27e-34!180;CL:0002371!1.30e-34!591;CL:0000220!5.86e-26!246;CL:0002321!2.44e-25!248;CL:0000222!2.34e-24!119;CL:0000183!2.12e-21!59;CL:0000003!1.04e-19!722;CL:0000680!1.13e-19!57;CL:0000056!1.13e-19!57;CL:0000355!1.13e-19!57;CL:0000187!5.21e-19!54;CL:0000192!3.33e-17!42;CL:0000514!3.33e-17!42;CL:0000057!2.27e-16!75;CL:0000393!2.01e-15!60;CL:0000211!2.01e-15!60;CL:0000359!2.66e-14!32;CL:0000063!4.00e-11!578;CL:0000048!1.65e-10!430;CL:0000723!1.93e-10!436;CL:0000034!1.77e-09!444;CL:0000066!6.46e-08!254;CL:0002494!1.27e-07!16 | |ontology_enrichment_celltype=CL:0000548!7.12e-37!679;CL:0000004!7.12e-37!679;CL:0000255!7.12e-37!679;CL:0000012!3.99e-36!682;CL:0000144!4.97e-36!625;CL:0000055!1.27e-34!180;CL:0002371!1.30e-34!591;CL:0000220!5.86e-26!246;CL:0002321!2.44e-25!248;CL:0000222!2.34e-24!119;CL:0000183!2.12e-21!59;CL:0000003!1.04e-19!722;CL:0000680!1.13e-19!57;CL:0000056!1.13e-19!57;CL:0000355!1.13e-19!57;CL:0000187!5.21e-19!54;CL:0000192!3.33e-17!42;CL:0000514!3.33e-17!42;CL:0000057!2.27e-16!75;CL:0000393!2.01e-15!60;CL:0000211!2.01e-15!60;CL:0000359!2.66e-14!32;CL:0000063!4.00e-11!578;CL:0000048!1.65e-10!430;CL:0000723!1.93e-10!436;CL:0000034!1.77e-09!444;CL:0000066!6.46e-08!254;CL:0002494!1.27e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.14e-13;32!CL:0000192;3.37e-12;43!CL:0000187;1.14e-10;55!CL:0000134;2.84e-08;55!CL:0000393;3.43e-08;61!CL:0000211;3.43e-08;61!CL:0000057;1.15e-07;73!CL:0002494;1.21e-07;16!CL:0000723;3.17e-07;61!CL:0000048;5.32e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.64e-25,250;CL:0000222,2.08e-24,121;CL:0000680,2.30e-19,58;CL:0000056,2.30e-19,58;CL:0000355,2.30e-19,58;CL:0000187,1.07e-18,55;CL:0000192,7.71e-17,43;CL:0000514,7.71e-17,43;CL:0000057,7.90e-17,76;CL:0000393,3.39e-15,61;CL:0000211,3.39e-15,61;CL:0000359,2.66e-14,32;CL:0000048,3.54e-10,427;CL:0000723,4.13e-10,433;CL:0000034,3.66e-09,441;CL:0000066,6.14e-08,253;CL:0002494,1.27e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;3.37e-12;43!CL:0000355;9.78e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.78e-23!143;UBERON:0003914!6.51e-23!118;UBERON:0000490!3.52e-21!138;UBERON:0002100!1.37e-19!216;UBERON:0000914!1.49e-19!83;UBERON:0002329!1.49e-19!83;UBERON:0003077!1.49e-19!83;UBERON:0003059!1.49e-19!83;UBERON:0007282!1.49e-19!83;UBERON:0009618!1.49e-19!83;UBERON:0007285!1.49e-19!83;UBERON:0000486!2.08e-19!82;UBERON:0004290!7.97e-19!70;UBERON:0002049!1.33e-16!79;UBERON:0007798!1.33e-16!79;UBERON:0001134!2.59e-16!61;UBERON:0002036!2.59e-16!61;UBERON:0003082!2.59e-16!61;UBERON:0004872!3.57e-16!84;UBERON:0001637!4.70e-16!42;UBERON:0003509!4.70e-16!42;UBERON:0004572!4.70e-16!42;UBERON:0002385!1.37e-15!63;UBERON:0001015!1.37e-15!63;UBERON:0000383!1.37e-15!63;UBERON:0000055!1.20e-14!69;UBERON:0003104!1.39e-14!238;UBERON:0009142!1.39e-14!238;UBERON:0001981!1.91e-14!60;UBERON:0007500!1.91e-14!60;UBERON:0004537!1.91e-14!60;UBERON:0006965!1.91e-14!60;UBERON:0004535!9.06e-13!110;UBERON:0000926!1.47e-12!448;UBERON:0004120!1.47e-12!448;UBERON:0006603!1.47e-12!448;UBERON:0004573!4.68e-12!33;UBERON:0004571!4.68e-12!33;UBERON:0001009!7.22e-12!113;UBERON:0003102!1.82e-08!95;UBERON:0009569!2.91e-08!113;UBERON:0000475!5.46e-08!365;UBERON:0000119!1.43e-07!312;UBERON:0000483!3.37e-07!309;UBERON:0002199!7.53e-07!45;UBERON:0002416!7.53e-07!45;UBERON:0000481!7.68e-07!347 | |ontology_enrichment_uberon=UBERON:0005256!2.78e-23!143;UBERON:0003914!6.51e-23!118;UBERON:0000490!3.52e-21!138;UBERON:0002100!1.37e-19!216;UBERON:0000914!1.49e-19!83;UBERON:0002329!1.49e-19!83;UBERON:0003077!1.49e-19!83;UBERON:0003059!1.49e-19!83;UBERON:0007282!1.49e-19!83;UBERON:0009618!1.49e-19!83;UBERON:0007285!1.49e-19!83;UBERON:0000486!2.08e-19!82;UBERON:0004290!7.97e-19!70;UBERON:0002049!1.33e-16!79;UBERON:0007798!1.33e-16!79;UBERON:0001134!2.59e-16!61;UBERON:0002036!2.59e-16!61;UBERON:0003082!2.59e-16!61;UBERON:0004872!3.57e-16!84;UBERON:0001637!4.70e-16!42;UBERON:0003509!4.70e-16!42;UBERON:0004572!4.70e-16!42;UBERON:0002385!1.37e-15!63;UBERON:0001015!1.37e-15!63;UBERON:0000383!1.37e-15!63;UBERON:0000055!1.20e-14!69;UBERON:0003104!1.39e-14!238;UBERON:0009142!1.39e-14!238;UBERON:0001981!1.91e-14!60;UBERON:0007500!1.91e-14!60;UBERON:0004537!1.91e-14!60;UBERON:0006965!1.91e-14!60;UBERON:0004535!9.06e-13!110;UBERON:0000926!1.47e-12!448;UBERON:0004120!1.47e-12!448;UBERON:0006603!1.47e-12!448;UBERON:0004573!4.68e-12!33;UBERON:0004571!4.68e-12!33;UBERON:0001009!7.22e-12!113;UBERON:0003102!1.82e-08!95;UBERON:0009569!2.91e-08!113;UBERON:0000475!5.46e-08!365;UBERON:0000119!1.43e-07!312;UBERON:0000483!3.37e-07!309;UBERON:0002199!7.53e-07!45;UBERON:0002416!7.53e-07!45;UBERON:0000481!7.68e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.84e-12;42!UBERON:0003509;5.84e-12;42!UBERON:0004572;5.84e-12;42!UBERON:0004573;5.54e-11;33!UBERON:0004571;5.54e-11;33!UBERON:0003914;2.66e-09;74!UBERON:0007500;3.07e-09;56!UBERON:0001981;3.07e-09;56!UBERON:0004537;3.07e-09;56!UBERON:0000055;8.84e-08;65!UBERON:0002049;3.08e-07;75!UBERON:0007798;3.08e-07;75 | |||
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| ||
|short_description=p1@SURF4 | |short_description=p1@SURF4 | ||
}} | }} |
Latest revision as of 06:59, 16 September 2015
Short description: | p1@SURF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SURF4_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000371991, ENST00000545297_5end |
EntrezGene: | SURF4 |
HGNC: | 11476 |
UniProt: | Q5T8U5B7Z6A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.64e-25 | 250 |
mesodermal cell | 2.08e-24 | 121 |
muscle precursor cell | 2.30e-19 | 58 |
myoblast | 2.30e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.30e-19 | 58 |
muscle cell | 1.07e-18 | 55 |
smooth muscle cell | 7.71e-17 | 43 |
smooth muscle myoblast | 7.71e-17 | 43 |
fibroblast | 7.90e-17 | 76 |
electrically responsive cell | 3.39e-15 | 61 |
electrically active cell | 3.39e-15 | 61 |
vascular associated smooth muscle cell | 2.66e-14 | 32 |
multi fate stem cell | 3.54e-10 | 427 |
somatic stem cell | 4.13e-10 | 433 |
stem cell | 3.66e-09 | 441 |
epithelial cell | 6.14e-08 | 253 |
cardiocyte | 1.27e-07 | 16 |