FFCP PHASE1:Hg19::chr4:184647015..184647018,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:184647015..184647018,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr4:184647015..184647018,+ | |description=CAGE_peak_at_chr4:184647015..184647018,+ | ||
|id=chr4:184647015..184647018,+ | |id=chr4:184647015..184647018,+ | ||
|ontology_enrichment_celltype=CL:0002535!8.38e-07!2 | |ontology_enrichment_celltype=CL:0002535!8.38e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.58e-12;10!UBERON:0005564;2.58e-12;10 | |||
|ontology_enrichment_disease=DOID:162!7.10e-16!235;DOID:14566!2.59e-15!239;DOID:0050687!1.86e-14!143;DOID:305!2.37e-12!106;DOID:1749!3.45e-10!14;DOID:3905!2.79e-08!9;DOID:5409!2.41e-07!4;DOID:1325!2.81e-07!7;DOID:3904!2.81e-07!7 | |ontology_enrichment_disease=DOID:162!7.10e-16!235;DOID:14566!2.59e-15!239;DOID:0050687!1.86e-14!143;DOID:305!2.37e-12!106;DOID:1749!3.45e-10!14;DOID:3905!2.79e-08!9;DOID:5409!2.41e-07!4;DOID:1325!2.81e-07!7;DOID:3904!2.81e-07!7 | ||
|ontology_enrichment_disease_v019=DOID:6193;9.99e-30;1!DOID:3350;1.33e-15;2!DOID:3910;2.21e-15;2!DOID:3908;6.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,9.99e-30,1;DOID:3350,1.33e-15,2;DOID:3910,2.05e-15,2;DOID:3908,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0006955!8.38e-07!2;UBERON:0004801!8.38e-07!2 | |ontology_enrichment_uberon=UBERON:0006955!8.38e-07!2;UBERON:0004801!8.38e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.21e-15;2!UBERON:0002173;2.21e-15;2!UBERON:0002186;2.21e-15;2!UBERON:0000473;3.93e-15;8!UBERON:0003135;2.76e-11;11!UBERON:0004821;1.04e-10;3!UBERON:0007499;1.04e-10;3!UBERON:0003215;1.04e-10;3!UBERON:0010368;1.04e-10;3!UBERON:0009911;1.04e-10;3!UBERON:0002299;1.04e-10;3!UBERON:0006524;1.04e-10;3!UBERON:0008874;1.04e-10;3!UBERON:0002169;1.04e-10;3!UBERON:0004894;1.04e-10;3!UBERON:0009856;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.05e-15,2;UBERON:0002173,2.05e-15,2;UBERON:0002186,2.05e-15,2;UBERON:0000473,3.53e-15,8;UBERON:0003135,2.55e-11,11;UBERON:0004821,9.90e-11,3;UBERON:0003215,9.90e-11,3;UBERON:0010368,9.90e-11,3;UBERON:0009911,9.90e-11,3;UBERON:0002299,9.90e-11,3;UBERON:0006524,9.90e-11,3;UBERON:0008874,9.90e-11,3;UBERON:0002169,9.90e-11,3;UBERON:0004894,9.90e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0.163232808159148,0,0,0,0,0,1.18608451472249,0.247127877893006,0,0,0,0,0,0.391329237864179,0,0,0,0,0,14.2807248443768,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,4.29965081179041,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.76736622782191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.471878893390961,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0.603851374266694,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1218035501107,1.87574891109325,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0.163232808159148,0,0,0,0,0,1.18608451472249,0.247127877893006,0,0,0,0,0,0.391329237864179,0,0,0,0,0,14.2807248443768,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,4.29965081179041,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.76736622782191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.471878893390961,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0.603851374266694,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1218035501107,1.87574891109325,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr4:184647015..184647018,+ | |short_description=p@chr4:184647015..184647018,+ | ||
}} | }} |
Latest revision as of 03:47, 30 July 2015
Short description: | p@chr4:184647015..184647018, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:184647015..184647018, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.05e-15 | 2 |
alveolar duct | 2.05e-15 | 2 |
bronchiole | 2.05e-15 | 2 |
testis | 3.53e-15 | 8 |
male reproductive organ | 2.55e-11 | 11 |
pulmonary alveolus epithelium | 9.90e-11 | 3 |
alveolus | 9.90e-11 | 3 |
pulmonary lobule | 9.90e-11 | 3 |
lobule | 9.90e-11 | 3 |
alveolus of lung | 9.90e-11 | 3 |
alveolar system | 9.90e-11 | 3 |
pulmonary acinus | 9.90e-11 | 3 |
alveolar sac | 9.90e-11 | 3 |
alveolar wall | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.99e-30 | 1 |
mesenchymal cell neoplasm | 1.33e-15 | 2 |
lung adenocarcinoma | 2.05e-15 | 2 |
non-small cell lung carcinoma | 6.04e-07 | 5 |