FFCP PHASE1:Hg19::chr16:12633181..12633216,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:12633181..12633216,+
|short_description=p@chr16:12633181..12633216,+
|description=CAGE_peak_at_chr16:12633181..12633216,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:12633181..12633216,+ | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr16:12633181..12633216,+ | |||
|id=chr16:12633181..12633216,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.46e-26!52;CL:0000542!2.55e-25!53;CL:0000051!2.55e-25!53;CL:0000084!5.03e-21!25;CL:0000827!5.03e-21!25;CL:0000791!6.79e-18!18;CL:0000789!6.79e-18!18;CL:0002420!6.79e-18!18;CL:0002419!6.79e-18!18;CL:0000790!6.79e-18!18;CL:0002087!1.45e-13!119;CL:0000738!2.94e-12!140;CL:0000624!5.36e-12!6;CL:0000080!5.33e-11!6;CL:0002031!4.40e-10!124;CL:0000988!8.02e-09!182;CL:0000037!5.18e-08!172;CL:0000566!5.18e-08!172;CL:0000625!1.60e-07!11;CL:0000898!5.67e-07!3;CL:0002032!5.72e-07!165;CL:0000837!5.72e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.18e-16;25!CL:0000542;5.00e-12;53!CL:0000624;5.57e-12;6!CL:0000945;4.70e-11;24!CL:0000791;3.47e-08;18!CL:0000789;3.47e-08;18!CL:0002419;3.47e-08;18!CL:0000898;5.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.52e-24,52;CL:0000542,2.22e-23,53;CL:0000051,2.22e-23,53;CL:0000084,6.05e-16,25;CL:0000827,6.05e-16,25;CL:0000624,2.88e-12,6;CL:0000945,4.58e-11,24;CL:0000826,4.58e-11,24;CL:0002087,8.53e-11,115;CL:0002031,3.64e-10,120;CL:0000738,1.82e-08,136;CL:0000791,2.38e-08,18;CL:0000789,2.38e-08,18;CL:0002420,2.38e-08,18;CL:0002419,2.38e-08,18;CL:0000790,2.38e-08,18;CL:0000898,4.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;5.00e-12;53!CL:0000790;3.47e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.85e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.89e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.18e-12!7;UBERON:0000178!1.56e-08!15;UBERON:0000179!1.56e-08!15;UBERON:0000463!1.56e-08!15;UBERON:0001042!6.10e-08!10;UBERON:0009145!6.10e-08!10;UBERON:0002370!2.25e-07!4;UBERON:0005058!2.25e-07!4;UBERON:0009113!2.25e-07!4;UBERON:0003295!2.25e-07!4;UBERON:0005562!2.25e-07!4;UBERON:0006562!4.08e-07!11;UBERON:0003351!4.57e-07!6;UBERON:0002106!5.90e-07!3;UBERON:0004854!5.90e-07!3;UBERON:0009034!5.90e-07!3;UBERON:0002095!5.90e-07!3;UBERON:0004782!5.90e-07!3;UBERON:0003281!5.90e-07!3;UBERON:0009664!5.90e-07!3;UBERON:0002296!5.90e-07!3;UBERON:0005602!5.90e-07!3;UBERON:0001179!5.90e-07!3;UBERON:0006293!5.90e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.59e-07,3;UBERON:0004854,3.59e-07,3;UBERON:0009034,3.59e-07,3;UBERON:0002095,3.59e-07,3;UBERON:0004782,3.59e-07,3;UBERON:0003281,3.59e-07,3;UBERON:0009664,3.59e-07,3;UBERON:0002296,3.59e-07,3;UBERON:0005602,3.59e-07,3;UBERON:0001179,3.59e-07,3;UBERON:0006293,3.59e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,6.87720651731561,6.23964479819588,10.9407986026014,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0.447830948479849,1.29557466407592,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0.590129310341499,1.96505381374582,1.64481199199607,7.35620579718984,0.977766799900771,1.4203434172042,0,16.2659267052353,12.3734481139432,16.6150420937716,30.3300327416817,41.3734962713931,40.7085757862419,2.95988228286617,0.829050053357545,1.15921234294021,0,0.267540828089713,0,8.0449633315272,1.91610246800961,4.81078423675682,4.04831507231205,0.318565414324097,1.30216690771284,0,0.903450714466637,0.639933055772092,0,1.4206635122641,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.431255149719035,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0,13.5139176865943,0,0,3.03912307084262,0,0.20453736500431,2.21552649829925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,0,1.18608451472249,0.617819694732514,0.835375596043643,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,2.28617996577618,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45782623993146,1.38328142328561,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34940933649081,0,0,0,1.04349012362347,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,7.9994958341972,0,2.2387947355906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1074013404563,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.603851374266694,0.154348316215889,0,0,0,0,0,0,0,0,2.16163011353663,0.644578879735772,29.3826998419291,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0.193766729508018,0.372448285775147,0.112131862580613,0,0,0.435433495793923,0,5.05140397609406,0.286888821570705,0,0,0,0,0,0,0,0.406896178315738,0,2.21401172950129,2.56454793842586 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| ||
|short_description=p@chr16:12633181..12633216,+ | |||
}} | }} |
Latest revision as of 06:19, 25 July 2015
Short description: | p@chr16:12633181..12633216, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:12633181..12633216, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.52e-24 | 52 |
lymphocyte | 2.22e-23 | 53 |
common lymphoid progenitor | 2.22e-23 | 53 |
T cell | 6.05e-16 | 25 |
pro-T cell | 6.05e-16 | 25 |
CD4-positive, alpha-beta T cell | 2.88e-12 | 6 |
lymphocyte of B lineage | 4.58e-11 | 24 |
pro-B cell | 4.58e-11 | 24 |
nongranular leukocyte | 8.53e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 3.64e-10 | 120 |
leukocyte | 1.82e-08 | 136 |
mature alpha-beta T cell | 2.38e-08 | 18 |
alpha-beta T cell | 2.38e-08 | 18 |
immature T cell | 2.38e-08 | 18 |
mature T cell | 2.38e-08 | 18 |
immature alpha-beta T cell | 2.38e-08 | 18 |
naive T cell | 4.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.59e-07 | 3 |
gastrointestinal system mesentery | 3.59e-07 | 3 |
stomach region | 3.59e-07 | 3 |
mesentery | 3.59e-07 | 3 |
gastrointestinal system serosa | 3.59e-07 | 3 |
mesentery of stomach | 3.59e-07 | 3 |
gut mesentery | 3.59e-07 | 3 |
dorsal mesentery | 3.59e-07 | 3 |
dorsal mesogastrium | 3.59e-07 | 3 |
peritoneal cavity | 3.59e-07 | 3 |
spleen primordium | 3.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.89e-11 | 10 |