FFCP PHASE1:Hg19::chr4:17513702..17513720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5860 | |EntrezGene=5860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9752 | |HGNC=9752 | ||
|TSSclassifier=strong | |||
|UniProt=B3KW71,D6RGG7,B7Z415 | |UniProt=B3KW71,D6RGG7,B7Z415 | ||
|association_with_transcript=0bp_to_ENST00000428702,ENST00000508623,ENST00000513615_5end | |association_with_transcript=0bp_to_ENST00000428702,ENST00000508623,ENST00000513615_5end | ||
|cluster_id=chr4:17513702..17513720,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_QDPR_5end | |description=CAGE_peak_1_at_QDPR_5end | ||
|id=chr4:17513702..17513720,- | |id=chr4:17513702..17513720,- | ||
|ontology_enrichment_celltype=CL:0000220!2.54e-09!246;CL:0002321!3.43e-09!248;CL:0000055!3.07e-08!180;CL:0000183!7.41e-08!59;CL:0000325!7.94e-08!39;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0000187!3.11e-07!54;CL:0000393!3.40e-07!60;CL:0000211!3.40e-07!60 | |ontology_enrichment_celltype=CL:0000220!2.54e-09!246;CL:0002321!3.43e-09!248;CL:0000055!3.07e-08!180;CL:0000183!7.41e-08!59;CL:0000325!7.94e-08!39;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0000187!3.11e-07!54;CL:0000393!3.40e-07!60;CL:0000211!3.40e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.66e-09,250;CL:0000680,1.57e-07,58;CL:0000056,1.57e-07,58;CL:0000355,1.57e-07,58;CL:0000187,2.55e-07,55;CL:0000393,2.77e-07,61;CL:0000211,2.77e-07,61;CL:0000221,7.46e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!2.66e-33!309;UBERON:0000119!2.92e-33!312;UBERON:0000025!7.45e-28!194;UBERON:0001049!9.16e-26!57;UBERON:0005068!9.16e-26!57;UBERON:0006241!9.16e-26!57;UBERON:0007135!9.16e-26!57;UBERON:0000475!2.33e-24!365;UBERON:0002616!1.19e-23!59;UBERON:0004111!1.24e-22!241;UBERON:0000073!2.61e-22!94;UBERON:0001016!2.61e-22!94;UBERON:0000481!1.12e-21!347;UBERON:0004121!1.14e-21!169;UBERON:0003075!1.26e-21!86;UBERON:0007284!1.26e-21!86;UBERON:0001017!1.49e-21!82;UBERON:0005743!2.42e-21!86;UBERON:0000924!2.54e-21!173;UBERON:0006601!2.54e-21!173;UBERON:0002346!7.66e-21!90;UBERON:0000477!1.19e-20!286;UBERON:0000955!2.19e-20!69;UBERON:0006238!2.19e-20!69;UBERON:0000033!1.34e-19!123;UBERON:0002780!2.08e-18!41;UBERON:0001890!2.08e-18!41;UBERON:0006240!2.08e-18!41;UBERON:0003080!2.83e-18!42;UBERON:0002020!1.66e-17!34;UBERON:0003528!1.66e-17!34;UBERON:0001893!1.88e-17!34;UBERON:0003056!3.35e-17!61;UBERON:0000153!4.53e-17!129;UBERON:0007811!4.53e-17!129;UBERON:0002791!7.80e-17!33;UBERON:0001869!4.05e-16!32;UBERON:0000922!1.03e-12!612;UBERON:0002050!3.54e-12!605;UBERON:0005423!3.54e-12!605;UBERON:0000923!4.14e-12!604;UBERON:0005291!4.14e-12!604;UBERON:0006598!4.14e-12!604;UBERON:0002532!4.14e-12!604;UBERON:0000956!7.16e-12!25;UBERON:0000203!7.16e-12!25;UBERON:0005256!3.29e-11!143;UBERON:0000914!4.28e-11!83;UBERON:0002329!4.28e-11!83;UBERON:0003077!4.28e-11!83;UBERON:0003059!4.28e-11!83;UBERON:0007282!4.28e-11!83;UBERON:0009618!4.28e-11!83;UBERON:0007285!4.28e-11!83;UBERON:0002619!5.21e-11!22;UBERON:0000064!6.56e-11!219;UBERON:0007023!8.92e-11!115;UBERON:0000467!2.00e-10!625;UBERON:0000480!4.29e-10!626;UBERON:0000468!6.07e-10!659;UBERON:0001950!7.76e-10!20;UBERON:0004290!3.46e-09!70;UBERON:0003076!1.04e-08!15;UBERON:0003057!1.04e-08!15;UBERON:0003914!1.24e-08!118;UBERON:0000486!3.99e-08!82;UBERON:0004732!1.01e-07!13;UBERON:0001134!1.11e-07!61;UBERON:0002036!1.11e-07!61;UBERON:0003082!1.11e-07!61;UBERON:0002100!1.24e-07!216;UBERON:0002308!2.64e-07!9;UBERON:0000125!2.64e-07!9;UBERON:0002385!3.37e-07!63;UBERON:0001015!3.37e-07!63;UBERON:0000383!3.37e-07!63;UBERON:0002420!4.11e-07!9;UBERON:0007245!4.11e-07!9;UBERON:0010009!4.11e-07!9;UBERON:0010011!4.11e-07!9;UBERON:0000454!4.11e-07!9;UBERON:0004733!4.41e-07!12;UBERON:0002028!4.41e-07!12;UBERON:0007277!4.41e-07!12;UBERON:0000490!9.08e-07!138 | |ontology_enrichment_uberon=UBERON:0000483!2.66e-33!309;UBERON:0000119!2.92e-33!312;UBERON:0000025!7.45e-28!194;UBERON:0001049!9.16e-26!57;UBERON:0005068!9.16e-26!57;UBERON:0006241!9.16e-26!57;UBERON:0007135!9.16e-26!57;UBERON:0000475!2.33e-24!365;UBERON:0002616!1.19e-23!59;UBERON:0004111!1.24e-22!241;UBERON:0000073!2.61e-22!94;UBERON:0001016!2.61e-22!94;UBERON:0000481!1.12e-21!347;UBERON:0004121!1.14e-21!169;UBERON:0003075!1.26e-21!86;UBERON:0007284!1.26e-21!86;UBERON:0001017!1.49e-21!82;UBERON:0005743!2.42e-21!86;UBERON:0000924!2.54e-21!173;UBERON:0006601!2.54e-21!173;UBERON:0002346!7.66e-21!90;UBERON:0000477!1.19e-20!286;UBERON:0000955!2.19e-20!69;UBERON:0006238!2.19e-20!69;UBERON:0000033!1.34e-19!123;UBERON:0002780!2.08e-18!41;UBERON:0001890!2.08e-18!41;UBERON:0006240!2.08e-18!41;UBERON:0003080!2.83e-18!42;UBERON:0002020!1.66e-17!34;UBERON:0003528!1.66e-17!34;UBERON:0001893!1.88e-17!34;UBERON:0003056!3.35e-17!61;UBERON:0000153!4.53e-17!129;UBERON:0007811!4.53e-17!129;UBERON:0002791!7.80e-17!33;UBERON:0001869!4.05e-16!32;UBERON:0000922!1.03e-12!612;UBERON:0002050!3.54e-12!605;UBERON:0005423!3.54e-12!605;UBERON:0000923!4.14e-12!604;UBERON:0005291!4.14e-12!604;UBERON:0006598!4.14e-12!604;UBERON:0002532!4.14e-12!604;UBERON:0000956!7.16e-12!25;UBERON:0000203!7.16e-12!25;UBERON:0005256!3.29e-11!143;UBERON:0000914!4.28e-11!83;UBERON:0002329!4.28e-11!83;UBERON:0003077!4.28e-11!83;UBERON:0003059!4.28e-11!83;UBERON:0007282!4.28e-11!83;UBERON:0009618!4.28e-11!83;UBERON:0007285!4.28e-11!83;UBERON:0002619!5.21e-11!22;UBERON:0000064!6.56e-11!219;UBERON:0007023!8.92e-11!115;UBERON:0000467!2.00e-10!625;UBERON:0000480!4.29e-10!626;UBERON:0000468!6.07e-10!659;UBERON:0001950!7.76e-10!20;UBERON:0004290!3.46e-09!70;UBERON:0003076!1.04e-08!15;UBERON:0003057!1.04e-08!15;UBERON:0003914!1.24e-08!118;UBERON:0000486!3.99e-08!82;UBERON:0004732!1.01e-07!13;UBERON:0001134!1.11e-07!61;UBERON:0002036!1.11e-07!61;UBERON:0003082!1.11e-07!61;UBERON:0002100!1.24e-07!216;UBERON:0002308!2.64e-07!9;UBERON:0000125!2.64e-07!9;UBERON:0002385!3.37e-07!63;UBERON:0001015!3.37e-07!63;UBERON:0000383!3.37e-07!63;UBERON:0002420!4.11e-07!9;UBERON:0007245!4.11e-07!9;UBERON:0010009!4.11e-07!9;UBERON:0010011!4.11e-07!9;UBERON:0000454!4.11e-07!9;UBERON:0004733!4.41e-07!12;UBERON:0002028!4.41e-07!12;UBERON:0007277!4.41e-07!12;UBERON:0000490!9.08e-07!138 | ||
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| ||
|short_description=p1@QDPR | |short_description=p1@QDPR | ||
}} | }} |
Latest revision as of 20:04, 16 September 2015
Short description: | p1@QDPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_QDPR_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000428702, ENST00000508623, ENST00000513615_5end |
EntrezGene: | QDPR |
HGNC: | 9752 |
UniProt: | B3KW71D6RGG7B7Z415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.66e-09 | 250 |
muscle precursor cell | 1.57e-07 | 58 |
myoblast | 1.57e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-07 | 58 |
muscle cell | 2.55e-07 | 55 |
electrically responsive cell | 2.77e-07 | 61 |
electrically active cell | 2.77e-07 | 61 |
ectodermal cell | 7.46e-07 | 72 |