FFCP PHASE1:Hg19::chr9:127020553..127020622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10783 | |EntrezGene=10783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |HGNC=7749 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010mwk.2_5end | |association_with_transcript=0bp_to_uc010mwk.2_5end | ||
|cluster_id=chr9:127020553..127020622,+ | |||
|description=CAGE_peak_2_at_NEK6_5end | |description=CAGE_peak_2_at_NEK6_5end | ||
|id=chr9:127020553..127020622,+ | |id=chr9:127020553..127020622,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.23e-15!180;CL:0000183!1.39e-11!59;CL:0000680!1.00e-10!57;CL:0000056!1.00e-10!57;CL:0000355!1.00e-10!57;CL:0000187!5.71e-10!54;CL:0000048!5.38e-09!430;CL:0000192!1.64e-08!42;CL:0000514!1.64e-08!42;CL:0000723!4.84e-08!436;CL:0000057!6.12e-08!75;CL:0000393!4.26e-07!60;CL:0000211!4.26e-07!60;CL:0000034!8.87e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.23e-15!180;CL:0000183!1.39e-11!59;CL:0000680!1.00e-10!57;CL:0000056!1.00e-10!57;CL:0000355!1.00e-10!57;CL:0000187!5.71e-10!54;CL:0000048!5.38e-09!430;CL:0000192!1.64e-08!42;CL:0000514!1.64e-08!42;CL:0000723!4.84e-08!436;CL:0000057!6.12e-08!75;CL:0000393!4.26e-07!60;CL:0000211!4.26e-07!60;CL:0000034!8.87e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000192;7.30e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.30e-11,58;CL:0000056,3.30e-11,58;CL:0000355,3.30e-11,58;CL:0000048,1.31e-10,427;CL:0000187,1.92e-10,55;CL:0000723,1.71e-09,433;CL:0000192,5.59e-09,43;CL:0000514,5.59e-09,43;CL:0000057,4.48e-08,76;CL:0000034,4.54e-08,441;CL:0000393,1.05e-07,61;CL:0000211,1.05e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;7.30e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.36e-12!365;UBERON:0002385!1.21e-10!63;UBERON:0001015!1.21e-10!63;UBERON:0000383!1.21e-10!63;UBERON:0000914!1.46e-10!83;UBERON:0002329!1.46e-10!83;UBERON:0003077!1.46e-10!83;UBERON:0003059!1.46e-10!83;UBERON:0007282!1.46e-10!83;UBERON:0009618!1.46e-10!83;UBERON:0007285!1.46e-10!83;UBERON:0001134!2.19e-10!61;UBERON:0002036!2.19e-10!61;UBERON:0003082!2.19e-10!61;UBERON:0004290!3.64e-10!70;UBERON:0000481!5.79e-09!347;UBERON:0000479!1.48e-08!787;UBERON:0005256!1.82e-08!143;UBERON:0002204!2.81e-08!167;UBERON:0000467!5.11e-08!625;UBERON:0000480!9.02e-08!626;UBERON:0000468!1.69e-07!659;UBERON:0000486!2.32e-07!82;UBERON:0000119!2.60e-07!312;UBERON:0002050!4.89e-07!605;UBERON:0005423!4.89e-07!605;UBERON:0000483!5.59e-07!309;UBERON:0000923!6.32e-07!604;UBERON:0005291!6.32e-07!604;UBERON:0006598!6.32e-07!604;UBERON:0002532!6.32e-07!604;UBERON:0000033!7.21e-07!123;UBERON:0002616!8.99e-07!59 | |ontology_enrichment_uberon=UBERON:0000475!5.36e-12!365;UBERON:0002385!1.21e-10!63;UBERON:0001015!1.21e-10!63;UBERON:0000383!1.21e-10!63;UBERON:0000914!1.46e-10!83;UBERON:0002329!1.46e-10!83;UBERON:0003077!1.46e-10!83;UBERON:0003059!1.46e-10!83;UBERON:0007282!1.46e-10!83;UBERON:0009618!1.46e-10!83;UBERON:0007285!1.46e-10!83;UBERON:0001134!2.19e-10!61;UBERON:0002036!2.19e-10!61;UBERON:0003082!2.19e-10!61;UBERON:0004290!3.64e-10!70;UBERON:0000481!5.79e-09!347;UBERON:0000479!1.48e-08!787;UBERON:0005256!1.82e-08!143;UBERON:0002204!2.81e-08!167;UBERON:0000467!5.11e-08!625;UBERON:0000480!9.02e-08!626;UBERON:0000468!1.69e-07!659;UBERON:0000486!2.32e-07!82;UBERON:0000119!2.60e-07!312;UBERON:0002050!4.89e-07!605;UBERON:0005423!4.89e-07!605;UBERON:0000483!5.59e-07!309;UBERON:0000923!6.32e-07!604;UBERON:0005291!6.32e-07!604;UBERON:0006598!6.32e-07!604;UBERON:0002532!6.32e-07!604;UBERON:0000033!7.21e-07!123;UBERON:0002616!8.99e-07!59 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000479,1.46e-11,773;UBERON:0002385,4.08e-11,64;UBERON:0001015,4.08e-11,64;UBERON:0000383,4.08e-11,64;UBERON:0007524,7.36e-11,73;UBERON:0001134,7.45e-11,62;UBERON:0002036,7.45e-11,62;UBERON:0003082,7.45e-11,62;UBERON:0007503,8.32e-11,78;UBERON:0003077,1.35e-10,72;UBERON:0007285,1.35e-10,72;UBERON:0002329,1.57e-10,71;UBERON:0003059,1.57e-10,71;UBERON:0007282,1.57e-10,71;UBERON:0004290,1.57e-10,71;UBERON:0009618,1.57e-10,71;UBERON:0002204,2.67e-10,167;UBERON:0005256,9.58e-10,122;UBERON:0000923,1.05e-09,560;UBERON:0010316,1.05e-09,560;UBERON:0005291,1.05e-09,560;UBERON:0006598,1.05e-09,560;UBERON:0010317,1.05e-09,560;UBERON:0002532,1.05e-09,560;UBERON:0002050,2.87e-09,564;UBERON:0003104,4.91e-08,160;UBERON:0009142,4.91e-08,160;UBERON:0010314,9.30e-08,132;UBERON:0005423,1.46e-07,581;UBERON:0000486,1.95e-07,83;UBERON:0000119,4.02e-07,309;UBERON:0003075,5.94e-07,82;UBERON:0007284,5.94e-07,82;UBERON:0000483,8.56e-07,306 | |||
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| ||
|short_description=p2@NEK6 | |short_description=p2@NEK6 | ||
}} | }} |
Latest revision as of 00:02, 25 September 2015
Short description: | p2@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010mwk.2_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.30e-11 | 58 |
myoblast | 3.30e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.30e-11 | 58 |
multi fate stem cell | 1.31e-10 | 427 |
muscle cell | 1.92e-10 | 55 |
somatic stem cell | 1.71e-09 | 433 |
smooth muscle cell | 5.59e-09 | 43 |
smooth muscle myoblast | 5.59e-09 | 43 |
fibroblast | 4.48e-08 | 76 |
stem cell | 4.54e-08 | 441 |
electrically responsive cell | 1.05e-07 | 61 |
electrically active cell | 1.05e-07 | 61 |