FFCP PHASE1:Hg19::chr16:10912605..10912656,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:10912605..10912656,-
|short_description=p2@FAM18A
|description=CAGE_peak_2_at_FAM18A_5end
|association_with_transcript=0bp_to_ENST00000299866,NM_001079512...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=780776 | |EntrezGene=780776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20398 | |HGNC=20398 | ||
|TSSclassifier=strong | |||
|UniProt=A6NH52 | |UniProt=A6NH52 | ||
|association_with_transcript=0bp_to_ENST00000299866,NM_001079512,uc002dad.3,uc002daf.1,uc010bun.2,uc010buo.1,uc010uyr.1,uc010uys.1,uc010uyt.1,uc010uyu.1_5end | |||
|cluster_id=chr16:10912605..10912656,- | |||
|description=CAGE_peak_2_at_FAM18A_5end | |||
|id=chr16:10912605..10912656,- | |||
|ontology_enrichment_celltype=CL:0000990!6.05e-09!8;CL:0000453!1.60e-07!5;CL:0000047!5.05e-07!8;CL:0000451!6.33e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000990;4.78e-14;8!CL:0000453;1.62e-11;5!CL:0000451;3.38e-11;10!CL:0000128;5.43e-10;7!CL:0000126;5.43e-10;7!CL:0000127;5.43e-10;7!CL:0000840;5.81e-08;5!CL:0002319;6.42e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,2.78e-14,8;CL:0000453,1.48e-11,5;CL:0000451,2.20e-11,10;CL:0000128,5.93e-10,7;CL:0000126,5.93e-10,7;CL:0000127,5.93e-10,7;CL:0002453,5.93e-10,7;CL:0000840,3.53e-08,5;CL:0001029,3.53e-08,5;CL:0002319,6.12e-07,25;CL:0002605,8.41e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.93e-11;82!UBERON:0006215;8.30e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.46e-57!57;UBERON:0005068!1.46e-57!57;UBERON:0006241!1.46e-57!57;UBERON:0007135!1.46e-57!57;UBERON:0005743!3.16e-56!86;UBERON:0001017!9.31e-55!82;UBERON:0007023!5.62e-54!115;UBERON:0000073!9.19e-54!94;UBERON:0001016!9.19e-54!94;UBERON:0003075!4.36e-51!86;UBERON:0007284!4.36e-51!86;UBERON:0002616!2.74e-48!59;UBERON:0002346!1.05e-47!90;UBERON:0002780!4.39e-44!41;UBERON:0001890!4.39e-44!41;UBERON:0006240!4.39e-44!41;UBERON:0000955!1.69e-43!69;UBERON:0006238!1.69e-43!69;UBERON:0003080!1.14e-42!42;UBERON:0001893!1.20e-37!34;UBERON:0002020!1.82e-37!34;UBERON:0003528!1.82e-37!34;UBERON:0003056!1.57e-36!61;UBERON:0002791!2.09e-36!33;UBERON:0001869!2.20e-36!32;UBERON:0000956!1.19e-31!25;UBERON:0000203!1.19e-31!25;UBERON:0002619!1.59e-28!22;UBERON:0000153!6.21e-28!129;UBERON:0007811!6.21e-28!129;UBERON:0004121!2.70e-27!169;UBERON:0001950!3.22e-26!20;UBERON:0000924!4.77e-26!173;UBERON:0006601!4.77e-26!173;UBERON:0000033!4.96e-26!123;UBERON:0000025!1.36e-17!194;UBERON:0003076!1.99e-15!15;UBERON:0003057!1.99e-15!15;UBERON:0004732!1.32e-13!13;UBERON:0004111!7.14e-13!241;UBERON:0004733!1.01e-12!12;UBERON:0002028!1.01e-12!12;UBERON:0007277!1.01e-12!12;UBERON:0000483!4.73e-12!309;UBERON:0000477!7.84e-12!286;UBERON:0000119!1.12e-11!312;UBERON:0000922!1.70e-11!612;UBERON:0000481!6.99e-11!347;UBERON:0001871!8.59e-11!7;UBERON:0000064!2.13e-10!219;UBERON:0002680!2.56e-10!9;UBERON:0001895!2.56e-10!9;UBERON:0010092!2.56e-10!9;UBERON:0000062!6.36e-10!511;UBERON:0000468!1.15e-09!659;UBERON:0002050!7.02e-09!605;UBERON:0005423!7.02e-09!605;UBERON:0000467!8.28e-09!625;UBERON:0000480!9.96e-09!626;UBERON:0000200!1.02e-08!6;UBERON:0000475!1.14e-08!365;UBERON:0000923!1.76e-08!604;UBERON:0005291!1.76e-08!604;UBERON:0006598!1.76e-08!604;UBERON:0002532!1.76e-08!604;UBERON:0002420!3.70e-08!9;UBERON:0007245!3.70e-08!9;UBERON:0010009!3.70e-08!9;UBERON:0010011!3.70e-08!9;UBERON:0000454!3.70e-08!9;UBERON:0001894!9.45e-08!7;UBERON:0006222!9.45e-08!7;UBERON:0002308!1.37e-07!9;UBERON:0000125!1.37e-07!9;UBERON:0001872!1.48e-07!5;UBERON:0002037!1.50e-07!6;UBERON:0006215!1.50e-07!6;UBERON:0000349!1.66e-07!5;UBERON:0002021!1.75e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;4.91e-52;25!UBERON:0000203;4.91e-52;25!UBERON:0001869;1.87e-51;32!UBERON:0002791;3.81e-48;32!UBERON:0002619;7.49e-47;22!UBERON:0003528;1.35e-46;34!UBERON:0002020;1.35e-46;34!UBERON:0001893;1.18e-45;34!UBERON:0001950;4.79e-43;20!UBERON:0002780;2.96e-41;41!UBERON:0001890;2.96e-41;41!UBERON:0000073;7.18e-40;53!UBERON:0002616;7.18e-40;53!UBERON:0000955;9.07e-29;68!UBERON:0001017;1.32e-26;75!UBERON:0001016;2.90e-24;83!UBERON:0004732;2.57e-16;13!UBERON:0001871;3.12e-15;6!UBERON:0004733;6.91e-15;12!UBERON:0002028;6.91e-15;12!UBERON:0000200;1.50e-13;6!UBERON:0002680;2.37e-13;9!UBERON:0001895;2.37e-13;9!UBERON:0007023;1.87e-12;114!UBERON:0002037;6.99e-12;6!UBERON:0001872;1.50e-11;5!UBERON:0002021;1.78e-11;5!UBERON:0000349;2.01e-11;5!UBERON:0011216;3.28e-10;132!UBERON:0000922;1.99e-08;49!UBERON:0002420;3.42e-08;9!UBERON:0007245;3.42e-08;9!UBERON:0010009;3.42e-08;9!UBERON:0010011;3.42e-08;9!UBERON:0000454;3.42e-08;9!UBERON:0001870;1.52e-07;3!UBERON:0001894;7.05e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.16e-74,56;UBERON:0005068,2.16e-74,56;UBERON:0006241,2.16e-74,56;UBERON:0007135,2.16e-74,56;UBERON:0001017,1.79e-72,81;UBERON:0000073,2.54e-72,53;UBERON:0002616,2.54e-72,53;UBERON:0001016,5.96e-71,89;UBERON:0000955,7.50e-61,68;UBERON:0006238,7.50e-61,68;UBERON:0002780,2.40e-58,41;UBERON:0001890,2.40e-58,41;UBERON:0003080,2.40e-58,41;UBERON:0006240,2.40e-58,41;UBERON:0001869,3.94e-57,32;UBERON:0003075,2.29e-55,82;UBERON:0007284,2.29e-55,82;UBERON:0001893,2.81e-53,34;UBERON:0002791,4.41e-53,32;UBERON:0003528,5.71e-53,34;UBERON:0002020,5.71e-53,34;UBERON:0000956,3.83e-52,25;UBERON:0000203,3.83e-52,25;UBERON:0002346,4.27e-52,86;UBERON:0002619,7.21e-47,22;UBERON:0001950,5.57e-43,20;UBERON:0003056,2.35e-42,61;UBERON:0010371,1.75e-40,104;UBERON:0007023,5.94e-37,114;UBERON:0010314,9.28e-35,132;UBERON:0004121,4.94e-33,171;UBERON:0000924,4.94e-33,171;UBERON:0006601,4.94e-33,171;UBERON:0011216,9.85e-32,223;UBERON:0000025,7.90e-18,192;UBERON:0003076,1.46e-16,15;UBERON:0003057,1.46e-16,15;UBERON:0004732,4.52e-16,13;UBERON:0001871,3.85e-15,6;UBERON:0004733,1.29e-14,12;UBERON:0002028,1.29e-14,12;UBERON:0007277,1.29e-14,12;UBERON:0000200,1.49e-13,6;UBERON:0004111,1.98e-13,240;UBERON:0002680,3.53e-13,9;UBERON:0001895,3.53e-13,9;UBERON:0010092,3.53e-13,9;UBERON:0001872,1.30e-11,5;UBERON:0002037,1.34e-11,6;UBERON:0006215,1.34e-11,6;UBERON:0000349,1.58e-11,5;UBERON:0002021,1.72e-11,5;UBERON:0000922,5.94e-10,592;UBERON:0000483,1.21e-09,306;UBERON:0000119,2.08e-09,309;UBERON:0002050,2.54e-09,564;UBERON:0000923,5.62e-09,560;UBERON:0010316,5.62e-09,560;UBERON:0005291,5.62e-09,560;UBERON:0006598,5.62e-09,560;UBERON:0010317,5.62e-09,560;UBERON:0002532,5.62e-09,560;UBERON:0005423,6.54e-09,581;UBERON:0002420,3.50e-08,9;UBERON:0007245,3.50e-08,9;UBERON:0010009,3.50e-08,9;UBERON:0010011,3.50e-08,9;UBERON:0000454,3.50e-08,9;UBERON:0001870,1.76e-07,3;UBERON:0001894,6.40e-07,7;UBERON:0006222,6.40e-07,7 | |||
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| ||
|short_description=p2@FAM18A | |||
}} | }} |
Latest revision as of 04:48, 20 September 2015
Short description: | p2@FAM18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM18A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000299866, NM_001079512, uc002dad.3, uc002daf.1, uc010bun.2, uc010buo.1, uc010uyr.1, uc010uys.1, uc010uyt.1, uc010uyu.1_5end |
EntrezGene: | FAM18A |
HGNC: | 20398 |
UniProt: | A6NH52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 2.78e-14 | 8 |
Langerhans cell | 1.48e-11 | 5 |
dendritic cell | 2.20e-11 | 10 |
oligodendrocyte | 5.93e-10 | 7 |
macroglial cell | 5.93e-10 | 7 |
astrocyte | 5.93e-10 | 7 |
oligodendrocyte precursor cell | 5.93e-10 | 7 |
immature conventional dendritic cell | 3.53e-08 | 5 |
common dendritic progenitor | 3.53e-08 | 5 |
neural cell | 6.12e-07 | 25 |
astrocyte of the cerebral cortex | 8.41e-07 | 3 |