FFCP PHASE1:Hg19::chr9:113800341..113800373,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1902 | |EntrezGene=1902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |HGNC=3166 | ||
|TSSclassifier=strong | |||
|UniProt=Q92633,Q5VZX0 | |UniProt=Q92633,Q5VZX0 | ||
|association_with_transcript=0bp_to_ENST00000358883,NM_001401,NM_057159,uc004bfb.2,uc004bfc.2,uc011lwn.1_5end | |association_with_transcript=0bp_to_ENST00000358883,NM_001401,NM_057159,uc004bfb.2,uc004bfc.2,uc011lwn.1_5end | ||
|cluster_id=chr9:113800341..113800373,- | |||
|coexpression_cluster_id=C2016 | |||
|description=CAGE_peak_4_at_LPAR1_5end | |description=CAGE_peak_4_at_LPAR1_5end | ||
|id=chr9:113800341..113800373,- | |id=chr9:113800341..113800373,- | ||
|ontology_enrichment_celltype=CL:0000055!4.41e-20!180;CL:0000057!3.37e-15!75;CL:0000680!7.09e-11!57;CL:0000056!7.09e-11!57;CL:0000355!7.09e-11!57;CL:0000187!5.71e-10!54;CL:0000183!1.13e-09!59;CL:0000393!4.09e-08!60;CL:0000211!4.09e-08!60;CL:0000192!1.07e-07!42;CL:0000514!1.07e-07!42 | |ontology_enrichment_celltype=CL:0000055!4.41e-20!180;CL:0000057!3.37e-15!75;CL:0000680!7.09e-11!57;CL:0000056!7.09e-11!57;CL:0000355!7.09e-11!57;CL:0000187!5.71e-10!54;CL:0000183!1.13e-09!59;CL:0000393!4.09e-08!60;CL:0000211!4.09e-08!60;CL:0000192!1.07e-07!42;CL:0000514!1.07e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.08e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.08e-16,76;CL:0000680,9.87e-12,58;CL:0000056,9.87e-12,58;CL:0000355,9.87e-12,58;CL:0000187,1.05e-10,55;CL:0000192,2.14e-08,43;CL:0000514,2.14e-08,43;CL:0000393,4.08e-08,61;CL:0000211,4.08e-08,61;CL:0002620,6.39e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.08e-25!365;UBERON:0000914!6.33e-18!83;UBERON:0002329!6.33e-18!83;UBERON:0003077!6.33e-18!83;UBERON:0003059!6.33e-18!83;UBERON:0007282!6.33e-18!83;UBERON:0009618!6.33e-18!83;UBERON:0007285!6.33e-18!83;UBERON:0000468!4.01e-16!659;UBERON:0000481!2.59e-14!347;UBERON:0001049!4.15e-14!57;UBERON:0005068!4.15e-14!57;UBERON:0006241!4.15e-14!57;UBERON:0007135!4.15e-14!57;UBERON:0000955!6.07e-14!69;UBERON:0006238!6.07e-14!69;UBERON:0000033!1.05e-13!123;UBERON:0002616!1.18e-13!59;UBERON:0000073!4.07e-13!94;UBERON:0001016!4.07e-13!94;UBERON:0004290!4.13e-13!70;UBERON:0001017!7.50e-13!82;UBERON:0000467!1.13e-12!625;UBERON:0000922!1.53e-12!612;UBERON:0000153!1.55e-12!129;UBERON:0007811!1.55e-12!129;UBERON:0000923!1.59e-12!604;UBERON:0005291!1.59e-12!604;UBERON:0006598!1.59e-12!604;UBERON:0002532!1.59e-12!604;UBERON:0002050!1.86e-12!605;UBERON:0005423!1.86e-12!605;UBERON:0000480!2.05e-12!626;UBERON:0000486!7.43e-12!82;UBERON:0005743!1.53e-11!86;UBERON:0005256!4.11e-11!143;UBERON:0001893!7.31e-11!34;UBERON:0002020!9.13e-11!34;UBERON:0003528!9.13e-11!34;UBERON:0004121!1.18e-10!169;UBERON:0000119!1.32e-10!312;UBERON:0000924!1.82e-10!173;UBERON:0006601!1.82e-10!173;UBERON:0002780!1.83e-10!41;UBERON:0001890!1.83e-10!41;UBERON:0006240!1.83e-10!41;UBERON:0003080!1.92e-10!42;UBERON:0001134!2.05e-10!61;UBERON:0002036!2.05e-10!61;UBERON:0003082!2.05e-10!61;UBERON:0002385!2.35e-10!63;UBERON:0001015!2.35e-10!63;UBERON:0000383!2.35e-10!63;UBERON:0002791!2.36e-10!33;UBERON:0002100!3.87e-10!216;UBERON:0000483!4.23e-10!309;UBERON:0003102!5.80e-10!95;UBERON:0000062!1.12e-09!511;UBERON:0001869!1.14e-09!32;UBERON:0003075!3.51e-09!86;UBERON:0007284!3.51e-09!86;UBERON:0002346!7.54e-09!90;UBERON:0000479!9.07e-09!787;UBERON:0000477!2.06e-08!286;UBERON:0007023!2.67e-08!115;UBERON:0002619!3.37e-08!22;UBERON:0001950!1.94e-07!20;UBERON:0000956!8.16e-07!25;UBERON:0000203!8.16e-07!25 | |ontology_enrichment_uberon=UBERON:0000475!2.08e-25!365;UBERON:0000914!6.33e-18!83;UBERON:0002329!6.33e-18!83;UBERON:0003077!6.33e-18!83;UBERON:0003059!6.33e-18!83;UBERON:0007282!6.33e-18!83;UBERON:0009618!6.33e-18!83;UBERON:0007285!6.33e-18!83;UBERON:0000468!4.01e-16!659;UBERON:0000481!2.59e-14!347;UBERON:0001049!4.15e-14!57;UBERON:0005068!4.15e-14!57;UBERON:0006241!4.15e-14!57;UBERON:0007135!4.15e-14!57;UBERON:0000955!6.07e-14!69;UBERON:0006238!6.07e-14!69;UBERON:0000033!1.05e-13!123;UBERON:0002616!1.18e-13!59;UBERON:0000073!4.07e-13!94;UBERON:0001016!4.07e-13!94;UBERON:0004290!4.13e-13!70;UBERON:0001017!7.50e-13!82;UBERON:0000467!1.13e-12!625;UBERON:0000922!1.53e-12!612;UBERON:0000153!1.55e-12!129;UBERON:0007811!1.55e-12!129;UBERON:0000923!1.59e-12!604;UBERON:0005291!1.59e-12!604;UBERON:0006598!1.59e-12!604;UBERON:0002532!1.59e-12!604;UBERON:0002050!1.86e-12!605;UBERON:0005423!1.86e-12!605;UBERON:0000480!2.05e-12!626;UBERON:0000486!7.43e-12!82;UBERON:0005743!1.53e-11!86;UBERON:0005256!4.11e-11!143;UBERON:0001893!7.31e-11!34;UBERON:0002020!9.13e-11!34;UBERON:0003528!9.13e-11!34;UBERON:0004121!1.18e-10!169;UBERON:0000119!1.32e-10!312;UBERON:0000924!1.82e-10!173;UBERON:0006601!1.82e-10!173;UBERON:0002780!1.83e-10!41;UBERON:0001890!1.83e-10!41;UBERON:0006240!1.83e-10!41;UBERON:0003080!1.92e-10!42;UBERON:0001134!2.05e-10!61;UBERON:0002036!2.05e-10!61;UBERON:0003082!2.05e-10!61;UBERON:0002385!2.35e-10!63;UBERON:0001015!2.35e-10!63;UBERON:0000383!2.35e-10!63;UBERON:0002791!2.36e-10!33;UBERON:0002100!3.87e-10!216;UBERON:0000483!4.23e-10!309;UBERON:0003102!5.80e-10!95;UBERON:0000062!1.12e-09!511;UBERON:0001869!1.14e-09!32;UBERON:0003075!3.51e-09!86;UBERON:0007284!3.51e-09!86;UBERON:0002346!7.54e-09!90;UBERON:0000479!9.07e-09!787;UBERON:0000477!2.06e-08!286;UBERON:0007023!2.67e-08!115;UBERON:0002619!3.37e-08!22;UBERON:0001950!1.94e-07!20;UBERON:0000956!8.16e-07!25;UBERON:0000203!8.16e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.91e-10;34!UBERON:0003528;1.67e-09;34!UBERON:0002020;1.67e-09;34!UBERON:0002791;2.42e-09;32!UBERON:0001869;2.52e-09;32!UBERON:0002619;5.83e-09;22!UBERON:0000075;1.93e-08;16!UBERON:0002780;2.25e-08;41!UBERON:0001890;2.25e-08;41!UBERON:0001950;4.47e-08;20!UBERON:0000073;1.95e-07;53!UBERON:0002616;1.95e-07;53!UBERON:0001017;3.18e-07;75!UBERON:0000956;6.04e-07;25!UBERON:0000203;6.04e-07;25 | |||
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| ||
|short_description=p4@LPAR1 | |short_description=p4@LPAR1 | ||
}} | }} |
Latest revision as of 03:59, 20 September 2015
Short description: | p4@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LPAR1_5end |
Coexpression cluster: | C2016_Fibroblast_corpus_Nucleus_Anulus_globus_tridermal_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000358883, NM_001401, NM_057159, uc004bfb.2, uc004bfc.2, uc011lwn.1_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | Q92633Q5VZX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.08e-16 | 76 |
muscle precursor cell | 9.87e-12 | 58 |
myoblast | 9.87e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.87e-12 | 58 |
muscle cell | 1.05e-10 | 55 |
smooth muscle cell | 2.14e-08 | 43 |
smooth muscle myoblast | 2.14e-08 | 43 |
electrically responsive cell | 4.08e-08 | 61 |
electrically active cell | 4.08e-08 | 61 |
skin fibroblast | 6.39e-07 | 23 |