FFCP PHASE1:Hg19::chr4:119757222..119757238,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9871 | |EntrezGene=9871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10706 | |HGNC=10706 | ||
|TSSclassifier=strong | |||
|UniProt=O94855 | |UniProt=O94855 | ||
|association_with_transcript=54bp_to_ENST00000280551_5end | |association_with_transcript=54bp_to_ENST00000280551_5end | ||
|cluster_id=chr4:119757222..119757238,- | |||
|coexpression_cluster_id=C1465 | |||
|description=CAGE_peak_2_at_SEC24D_5end | |description=CAGE_peak_2_at_SEC24D_5end | ||
|id=chr4:119757222..119757238,- | |id=chr4:119757222..119757238,- | ||
|ontology_enrichment_celltype=CL:0000055!2.69e-30!180;CL:0000057!1.63e-18!75;CL:0002371!1.19e-15!591;CL:0000048!1.20e-15!430;CL:0000680!1.23e-15!57;CL:0000056!1.23e-15!57;CL:0000355!1.23e-15!57;CL:0000144!3.25e-15!625;CL:0000187!8.26e-15!54;CL:0000723!2.78e-14!436;CL:0000192!1.01e-13!42;CL:0000514!1.01e-13!42;CL:0000034!1.48e-13!444;CL:0000183!2.01e-13!59;CL:0000222!5.91e-13!119;CL:0000359!7.37e-13!32;CL:0000393!1.96e-12!60;CL:0000211!1.96e-12!60;CL:0000548!1.18e-10!679;CL:0000004!1.18e-10!679;CL:0000255!1.18e-10!679;CL:0000012!2.10e-10!682;CL:0002620!2.80e-09!23;CL:0002494!4.22e-08!16 | |ontology_enrichment_celltype=CL:0000055!2.69e-30!180;CL:0000057!1.63e-18!75;CL:0002371!1.19e-15!591;CL:0000048!1.20e-15!430;CL:0000680!1.23e-15!57;CL:0000056!1.23e-15!57;CL:0000355!1.23e-15!57;CL:0000144!3.25e-15!625;CL:0000187!8.26e-15!54;CL:0000723!2.78e-14!436;CL:0000192!1.01e-13!42;CL:0000514!1.01e-13!42;CL:0000034!1.48e-13!444;CL:0000183!2.01e-13!59;CL:0000222!5.91e-13!119;CL:0000359!7.37e-13!32;CL:0000393!1.96e-12!60;CL:0000211!1.96e-12!60;CL:0000548!1.18e-10!679;CL:0000004!1.18e-10!679;CL:0000255!1.18e-10!679;CL:0000012!2.10e-10!682;CL:0002620!2.80e-09!23;CL:0002494!4.22e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.27e-12;32!CL:0000192;2.34e-10;43!CL:0002620;3.26e-09;23!CL:0000134;9.89e-09;55!CL:0000187;2.02e-08;55!CL:0002494;2.29e-08;16!CL:0000057;6.70e-08;73!CL:0000723;1.78e-07;61!CL:0000393;2.35e-07;61!CL:0000211;2.35e-07;61!CL:0000048;2.97e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.99e-20,76;CL:0000048,4.42e-17,427;CL:0000680,6.95e-16,58;CL:0000056,6.95e-16,58;CL:0000355,6.95e-16,58;CL:0000723,1.06e-15,433;CL:0000187,4.83e-15,55;CL:0000034,5.30e-15,441;CL:0000192,6.62e-14,43;CL:0000514,6.62e-14,43;CL:0000222,3.82e-13,121;CL:0000359,4.53e-13,32;CL:0000393,1.01e-12,61;CL:0000211,1.01e-12,61;CL:0002620,2.00e-09,23;CL:0002494,3.18e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.34e-10;43!CL:0000355;1.53e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;3.65e-10;33!UBERON:0004571;3.65e-10;33!UBERON:0001637;8.22e-10;42!UBERON:0003509;8.22e-10;42!UBERON:0004572;8.22e-10;42!UBERON:0000948;6.28e-08;22!UBERON:0007500;3.59e-07;56!UBERON:0001981;3.59e-07;56!UBERON:0004537;3.59e-07;56!UBERON:0007100;9.03e-07;25!UBERON:0002384;9.61e-07;198!UBERON:0000947;9.66e-07;21!UBERON:0010191;9.66e-07;21 | |||
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| ||
|short_description=p2@SEC24D | |short_description=p2@SEC24D | ||
}} | }} |
Latest revision as of 21:20, 24 September 2015
Short description: | p2@SEC24D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEC24D_5end |
Coexpression cluster: | C1465_Mast_Preadipocyte_Fibroblast_Smooth_Chondrocyte_basal_Osteoblast |
Association with transcript: | 54bp_to_ENST00000280551_5end |
EntrezGene: | SEC24D |
HGNC: | 10706 |
UniProt: | O94855 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.99e-20 | 76 |
multi fate stem cell | 4.42e-17 | 427 |
muscle precursor cell | 6.95e-16 | 58 |
myoblast | 6.95e-16 | 58 |
multi-potent skeletal muscle stem cell | 6.95e-16 | 58 |
somatic stem cell | 1.06e-15 | 433 |
muscle cell | 4.83e-15 | 55 |
stem cell | 5.30e-15 | 441 |
smooth muscle cell | 6.62e-14 | 43 |
smooth muscle myoblast | 6.62e-14 | 43 |
mesodermal cell | 3.82e-13 | 121 |
vascular associated smooth muscle cell | 4.53e-13 | 32 |
electrically responsive cell | 1.01e-12 | 61 |
electrically active cell | 1.01e-12 | 61 |
skin fibroblast | 2.00e-09 | 23 |
cardiocyte | 3.18e-08 | 16 |