FFCP PHASE1:Hg19::chr8:99403902..99403910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:99403902..99403910,+ | |||
|coexpression_cluster_id=C513 | |||
|description=CAGE_peak_at_chr8:99403902..99403910,+ | |description=CAGE_peak_at_chr8:99403902..99403910,+ | ||
|id=chr8:99403902..99403910,+ | |id=chr8:99403902..99403910,+ | ||
|ontology_enrichment_celltype=CL:0002202!5.39e-07!9;CL:0002632!5.39e-07!9;CL:0000548!6.51e-07!679;CL:0000004!6.51e-07!679;CL:0000255!6.51e-07!679;CL:0000012!9.58e-07!682 | |ontology_enrichment_celltype=CL:0002202!5.39e-07!9;CL:0002632!5.39e-07!9;CL:0000548!6.51e-07!679;CL:0000004!6.51e-07!679;CL:0000255!6.51e-07!679;CL:0000012!9.58e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.34e-29;3!CL:0002202;6.41e-27;9!CL:0002632;6.41e-27;9!CL:0002368;1.44e-26;13!CL:0000317;4.44e-20;2!CL:1000448;4.44e-20;2!CL:0002308;4.44e-20;2!CL:0002140;4.44e-20;2!CL:0002328;4.28e-14;3!CL:0000622;1.37e-08;5!CL:0002076;1.67e-07;42!CL:0000154;2.69e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.98e-29,3;CL:0000069,1.98e-29,3;CL:0000307,1.98e-29,3;CL:0000377,1.98e-29,3;CL:0002202,7.74e-27,9;CL:0002632,7.74e-27,9;CL:0002368,1.68e-26,13;CL:0000317,5.40e-20,2;CL:1000448,5.40e-20,2;CL:0002308,5.40e-20,2;CL:0002140,5.40e-20,2;CL:0002328,4.15e-14,3;CL:0002076,1.32e-10,42;CL:0000622,1.48e-08,5;CL:0000223,1.78e-07,58;CL:0000154,2.87e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.34e-29;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.05e-10;1!DOID:3165;1.05e-10;1!DOID:0060121;1.05e-10;1!DOID:2438;1.05e-10;1!DOID:4418;1.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.14e-11,1;DOID:3165,6.14e-11,1;DOID:0060121,6.14e-11,1;DOID:2438,6.14e-11,1;DOID:4418,6.14e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.87e-07!5;UBERON:0002199!6.73e-07!45;UBERON:0002416!6.73e-07!45 | |ontology_enrichment_uberon=UBERON:0003729!1.87e-07!5;UBERON:0002199!6.73e-07!45;UBERON:0002416!6.73e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.44e-20;2!UBERON:0007771;4.44e-20;2!UBERON:0003297;4.44e-20;2!UBERON:0001821;4.44e-20;2!UBERON:0003487;4.44e-20;2!UBERON:0001820;4.44e-20;2!UBERON:0007196;3.91e-16;15!UBERON:0001558;3.91e-16;15!UBERON:0004815;4.28e-14;3!UBERON:0002031;4.28e-14;3!UBERON:0003126;4.76e-13;7!UBERON:0001005;4.76e-13;7!UBERON:0002185;8.18e-09;5!UBERON:0005178;2.84e-07;34!UBERON:0002224;2.84e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.40e-20,2;UBERON:0007771,5.40e-20,2;UBERON:0003297,5.40e-20,2;UBERON:0001821,5.40e-20,2;UBERON:0003487,5.40e-20,2;UBERON:0001820,5.40e-20,2;UBERON:0005089,5.40e-20,2;UBERON:0005088,5.40e-20,2;UBERON:0007196,4.37e-16,15;UBERON:0001558,4.37e-16,15;UBERON:0004815,4.15e-14,3;UBERON:0002031,4.15e-14,3;UBERON:0003126,5.61e-13,7;UBERON:0001005,5.61e-13,7;UBERON:0002185,8.03e-09,5;UBERON:0000065,4.39e-08,54;UBERON:0005178,5.17e-07,34;UBERON:0002224,5.17e-07,34;UBERON:0000072,5.57e-07,47;UBERON:0005181,8.30e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0,5.51652734687356,3.614471025339,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25572744982203,0,0,0.900273288253207,0,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.141775097242386,0.268675568108545,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0.532685175939381,0.410635780069046,0.519254429183621,1.04589340613963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,3.25030123018261,0,0,0,0.460511024178389,1.10269257987624,0,0,0,0,0,0,4.21121951232128,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0.48763373908959,0,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0,0,0.845086807596724,0.143411352204052,0,0,0,0,0,0,0,1.05844323998063,3.35151137767894,9.80018863751903,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,2.84630599086278,0.158936578980379,0.210998064528027,0.326465616318295,0,0.432777279484182,0,0,0,0.889563386041866,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,2.1045278718029,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0.548167698587004,1.9871461170299,0,0,0,0,0,0,0,0.171594997861965,0.432164393964449,0.248505071130865,0,0,0.313808538937,0.203996435272644,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.169346664131569,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0.492555124496034,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.499921631848426,0.303298235083296,0,0,0,0.144921028610825,0.298509605773748,0,0.554805861502613,0.189403005275089,0,0,0,0,0.310874401165561,0.295710299979268,0.318593534327405,0,0,0,0,0,0,0.380805212168795,0.813741466409323,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.537266523244462,0,0.219284049578707,0,0.578742114812744,0,0,0.345430341731199,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.733714394086716,1.96393632455575,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88184358887261,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0.203977659483963,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.897054900644907,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0,5.51652734687356,3.614471025339,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25572744982203,0,0,0.900273288253207,0,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.141775097242386,0.268675568108545,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0.532685175939381,0.410635780069046,0.519254429183621,1.04589340613963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,3.25030123018261,0,0,0,0.460511024178389,1.10269257987624,0,0,0,0,0,0,4.21121951232128,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0.48763373908959,0,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0,0,0.845086807596724,0.143411352204052,0,0,0,0,0,0,0,1.05844323998063,3.35151137767894,9.80018863751903,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,2.84630599086278,0.158936578980379,0.210998064528027,0.326465616318295,0,0.432777279484182,0,0,0,0.889563386041866,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,2.1045278718029,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0.548167698587004,1.9871461170299,0,0,0,0,0,0,0,0.171594997861965,0.432164393964449,0.248505071130865,0,0,0.313808538937,0.203996435272644,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.169346664131569,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0.492555124496034,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.499921631848426,0.303298235083296,0,0,0,0.144921028610825,0.298509605773748,0,0.554805861502613,0.189403005275089,0,0,0,0,0.310874401165561,0.295710299979268,0.318593534327405,0,0,0,0,0,0,0.380805212168795,0.813741466409323,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.537266523244462,0,0.219284049578707,0,0.578742114812744,0,0,0.345430341731199,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.733714394086716,1.96393632455575,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88184358887261,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0.203977659483963,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.897054900644907,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:99403902..99403910,+ | |short_description=p@chr8:99403902..99403910,+ | ||
}} | }} |
Latest revision as of 20:55, 31 July 2015
Short description: | p@chr8:99403902..99403910, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:99403902..99403910, + |
Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.98e-29 | 3 |
branched duct epithelial cell | 1.98e-29 | 3 |
tracheal epithelial cell | 1.98e-29 | 3 |
tracheoblast | 1.98e-29 | 3 |
epithelial cell of tracheobronchial tree | 7.74e-27 | 9 |
epithelial cell of lower respiratory tract | 7.74e-27 | 9 |
respiratory epithelial cell | 1.68e-26 | 13 |
sebum secreting cell | 5.40e-20 | 2 |
epithelial cell of sweat gland | 5.40e-20 | 2 |
epithelial cell of skin gland | 5.40e-20 | 2 |
acinar cell of sebaceous gland | 5.40e-20 | 2 |
bronchial epithelial cell | 4.15e-14 | 3 |
endo-epithelial cell | 1.32e-10 | 42 |
acinar cell | 1.48e-08 | 5 |
endodermal cell | 1.78e-07 | 58 |
protein secreting cell | 2.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.40e-20 | 2 |
epidermis gland | 5.40e-20 | 2 |
gland of integumental system | 5.40e-20 | 2 |
sebaceous gland | 5.40e-20 | 2 |
skin sebaceous gland | 5.40e-20 | 2 |
sweat gland | 5.40e-20 | 2 |
sweat gland placode | 5.40e-20 | 2 |
sebaceous gland placode | 5.40e-20 | 2 |
tracheobronchial tree | 4.37e-16 | 15 |
lower respiratory tract | 4.37e-16 | 15 |
lower respiratory tract epithelium | 4.15e-14 | 3 |
epithelium of bronchus | 4.15e-14 | 3 |
trachea | 5.61e-13 | 7 |
respiratory airway | 5.61e-13 | 7 |
bronchus | 8.03e-09 | 5 |
respiratory tract | 4.39e-08 | 54 |
thoracic cavity element | 5.17e-07 | 34 |
thoracic cavity | 5.17e-07 | 34 |
segment of respiratory tract | 5.57e-07 | 47 |
thoracic segment organ | 8.30e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.14e-11 | 1 |
skin benign neoplasm | 6.14e-11 | 1 |
integumentary system benign neoplasm | 6.14e-11 | 1 |
dermis tumor | 6.14e-11 | 1 |
cutaneous fibrous histiocytoma | 6.14e-11 | 1 |