FFCP PHASE1:Hg19::chr15:93443871..93443879,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:93443871..93443879,+
|short_description=p5@CHD2
|description=CAGE_peak_5_at_CHD2_5end
|association_with_transcript=279bp_to_ENST00000554122_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1106 | |EntrezGene=1106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1917 | |HGNC=1917 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=279bp_to_ENST00000554122_5end | |||
|cluster_id=chr15:93443871..93443879,+ | |||
|coexpression_cluster_id=C838 | |||
|description=CAGE_peak_5_at_CHD2_5end | |||
|id=chr15:93443871..93443879,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.91e-30!140;CL:0002087!7.69e-26!119;CL:0002031!1.87e-23!124;CL:0000037!4.70e-22!172;CL:0000566!4.70e-22!172;CL:0002032!2.46e-20!165;CL:0000837!2.46e-20!165;CL:0000988!3.02e-19!182;CL:0002057!1.33e-18!42;CL:0000860!3.39e-18!45;CL:0000766!1.15e-16!76;CL:0002009!1.08e-14!65;CL:0002194!8.29e-14!63;CL:0000576!8.29e-14!63;CL:0000040!8.29e-14!63;CL:0000559!8.29e-14!63;CL:0000557!7.97e-13!71;CL:0000839!5.27e-12!70;CL:0000542!5.81e-11!53;CL:0000051!5.81e-11!53;CL:0000838!7.15e-11!52;CL:0000763!4.07e-10!112;CL:0000049!4.07e-10!112;CL:0000791!6.80e-10!18;CL:0000789!6.80e-10!18;CL:0002420!6.80e-10!18;CL:0002419!6.80e-10!18;CL:0000790!6.80e-10!18;CL:0000084!2.38e-07!25;CL:0000827!2.38e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-19;33!CL:0002057;1.13e-19;33!CL:0000473;5.49e-16;39!CL:0000234;5.49e-16;39!CL:0000576;1.88e-14;48!CL:0000791;5.69e-12;18!CL:0000789;5.69e-12;18!CL:0002419;5.69e-12;18!CL:0000766;1.61e-11;69!CL:0002087;8.60e-11;104!CL:0000094;9.35e-09;8!CL:0000738;1.28e-08;136!CL:0000084;4.23e-08;25!CL:0000542;4.14e-07;53!CL:0000081;8.18e-07;11!CL:0000625;9.27e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.17e-40,136;CL:0002087,9.65e-36,115;CL:0002031,7.50e-32,120;CL:0000037,2.93e-29,168;CL:0000988,9.95e-27,177;CL:0002032,2.72e-26,161;CL:0000837,2.72e-26,161;CL:0000860,7.38e-26,42;CL:0002057,7.38e-26,42;CL:0000473,2.15e-25,48;CL:0000234,2.15e-25,48;CL:0000766,4.98e-25,72;CL:0002009,2.67e-23,61;CL:0002194,6.62e-22,59;CL:0000576,6.62e-22,59;CL:0000040,6.62e-22,59;CL:0000559,6.62e-22,59;CL:0000557,1.33e-19,67;CL:0000839,8.87e-18,66;CL:0000763,4.01e-14,108;CL:0000049,4.01e-14,108;CL:0000791,4.15e-13,18;CL:0000789,4.15e-13,18;CL:0002420,4.15e-13,18;CL:0002419,4.15e-13,18;CL:0000790,4.15e-13,18;CL:0000838,1.34e-12,52;CL:0000542,3.91e-12,53;CL:0000051,3.91e-12,53;CL:0000084,7.85e-09,25;CL:0000827,7.85e-09,25;CL:0000094,1.00e-08,8;CL:0000134,2.75e-08,354;CL:0002320,3.11e-08,361;CL:0000625,1.50e-07,11;CL:0000034,2.25e-07,441;CL:0000723,3.21e-07,433;CL:0000219,3.47e-07,386;CL:0000624,6.26e-07,6;CL:0000048,6.35e-07,427;CL:0000081,7.17e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-18;42!CL:0000790;5.69e-12;18!CL:0000051;4.14e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.56e-12!102;UBERON:0003061!1.56e-12!102;UBERON:0002193!8.78e-12!112;UBERON:0002371!1.29e-11!80;UBERON:0001474!2.16e-10!86;UBERON:0004765!1.64e-08!101;UBERON:0001434!1.64e-08!101;UBERON:0002405!7.84e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.52e-18,98;UBERON:0003061,1.52e-18,98;UBERON:0002371,4.87e-18,76;UBERON:0001474,2.84e-16,82;UBERON:0002193,5.11e-16,108;UBERON:0004765,7.19e-15,90;UBERON:0002405,4.23e-14,93;UBERON:0001434,3.32e-12,100;UBERON:0002384,6.15e-08,371;UBERON:0002204,6.19e-07,167 | |||
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| ||
|short_description=p5@CHD2 | |||
}} | }} |
Latest revision as of 23:18, 19 September 2015
Short description: | p5@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHD2_5end |
Coexpression cluster: | C838_Eosinophils_CD4_Neutrophils_CD8_CD14_Natural_CD19 |
Association with transcript: | 279bp_to_ENST00000554122_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.52e-18 | 98 |
blood island | 1.52e-18 | 98 |
bone marrow | 4.87e-18 | 76 |
bone element | 2.84e-16 | 82 |
hemolymphoid system | 5.11e-16 | 108 |
skeletal element | 7.19e-15 | 90 |
immune system | 4.23e-14 | 93 |
skeletal system | 3.32e-12 | 100 |
connective tissue | 6.15e-08 | 371 |
musculoskeletal system | 6.19e-07 | 167 |