FFCP PHASE1:Hg19::chr8:81553800..81553804,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:81553800..81553804,- | |||
|coexpression_cluster_id=C4774 | |||
|description=CAGE_peak_at_chr8:81553800..81553804,- | |description=CAGE_peak_at_chr8:81553800..81553804,- | ||
|id=chr8:81553800..81553804,- | |id=chr8:81553800..81553804,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;9.90e-11;3!CL:0000333;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.99e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.02e-09!10;DOID:0050687!3.01e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:171;3.03e-26;10!DOID:3910;2.05e-15;2!DOID:3095;2.26e-12;22!DOID:2994;2.26e-12;22!DOID:3908;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.60e-26,10;DOID:3910,1.78e-15,2;DOID:3095,2.44e-12,22;DOID:2994,2.44e-12,22;DOID:3908,5.70e-07,5 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.78e-15,2;UBERON:0002173,1.78e-15,2;UBERON:0002186,1.78e-15,2;UBERON:0004821,8.99e-11,3;UBERON:0003215,8.99e-11,3;UBERON:0010368,8.99e-11,3;UBERON:0009911,8.99e-11,3;UBERON:0002299,8.99e-11,3;UBERON:0006524,8.99e-11,3;UBERON:0008874,8.99e-11,3;UBERON:0002169,8.99e-11,3;UBERON:0004894,8.99e-11,3;UBERON:0002021,6.04e-07,5;UBERON:0000013,6.77e-07,5;UBERON:0002410,6.77e-07,5 | |||
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| ||
|short_description=p@chr8:81553800..81553804,- | |short_description=p@chr8:81553800..81553804,- | ||
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Latest revision as of 20:05, 31 July 2015
Short description: | p@chr8:81553800..81553804, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:81553800..81553804, - |
Coexpression cluster: | C4774_neuroectodermal_neuroblastoma_alveolar_parietal_temporal_occipital_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.78e-15 | 2 |
alveolar duct | 1.78e-15 | 2 |
bronchiole | 1.78e-15 | 2 |
pulmonary alveolus epithelium | 8.99e-11 | 3 |
alveolus | 8.99e-11 | 3 |
pulmonary lobule | 8.99e-11 | 3 |
lobule | 8.99e-11 | 3 |
alveolus of lung | 8.99e-11 | 3 |
alveolar system | 8.99e-11 | 3 |
pulmonary acinus | 8.99e-11 | 3 |
alveolar sac | 8.99e-11 | 3 |
alveolar wall | 8.99e-11 | 3 |
occipital lobe | 6.04e-07 | 5 |
sympathetic nervous system | 6.77e-07 | 5 |
autonomic nervous system | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.60e-26 | 10 |
lung adenocarcinoma | 1.78e-15 | 2 |
germ cell and embryonal cancer | 2.44e-12 | 22 |
germ cell cancer | 2.44e-12 | 22 |
non-small cell lung carcinoma | 5.70e-07 | 5 |