FFCP PHASE1:Hg19::chr3:98810580..98810585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98810580..98810585,+ | |||
|description=CAGE_peak_at_chr3:98810580..98810585,+ | |description=CAGE_peak_at_chr3:98810580..98810585,+ | ||
|id=chr3:98810580..98810585,+ | |id=chr3:98810580..98810585,+ | ||
|ontology_enrichment_celltype=CL:0000064!2.43e-08!3;CL:0005012!2.43e-08!3;CL:0000067!2.43e-08!3;CL:0002304!2.43e-08!3 | |ontology_enrichment_celltype=CL:0000064!2.43e-08!3;CL:0005012!2.43e-08!3;CL:0000067!2.43e-08!3;CL:0002304!2.43e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.65e-16;1!CL:0002372;1.65e-16;1!CL:0002379;1.65e-16;1!CL:0000047;4.18e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.04e-16,1;CL:0000228,1.65e-16,1;CL:0002372,1.65e-16,1;CL:0000047,1.26e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.65e-16;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.65e-16;1!DOID:3111;1.65e-16;1!DOID:3565;1.65e-16;1!DOID:3603;1.65e-16;1!DOID:4929;3.43e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.04e-16,1;DOID:3565,1.04e-16,1;DOID:3111,2.25e-16,1;DOID:3603,2.25e-16,1;DOID:4929,3.43e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.68e-10!4;UBERON:0001778!2.43e-08!3;UBERON:0001775!2.43e-08!3;UBERON:0002203!5.39e-07!6;UBERON:0001768!5.39e-07!6;UBERON:0002081!9.83e-07!2 | |ontology_enrichment_uberon=UBERON:0000488!1.68e-10!4;UBERON:0001778!2.43e-08!3;UBERON:0001775!2.43e-08!3;UBERON:0002203!5.39e-07!6;UBERON:0001768!5.39e-07!6;UBERON:0002081!9.83e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;4.72e-17;1!UBERON:0003703;4.72e-17;1!UBERON:0001174;4.72e-17;1!UBERON:0004914;4.72e-17;1!UBERON:0000941;1.65e-16;1!UBERON:0001785;1.65e-16;1!UBERON:0002464;1.65e-16;1!UBERON:0004904;1.65e-16;1!UBERON:0001021;1.65e-16;1!UBERON:0003714;6.42e-09;2!UBERON:0005162;6.42e-09;2!UBERON:0000122;6.42e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.72e-17,1;UBERON:0003703,4.72e-17,1;UBERON:0001174,4.72e-17,1;UBERON:0004914,4.72e-17,1;UBERON:0000941,1.41e-16,1;UBERON:0001785,1.41e-16,1;UBERON:0002464,1.41e-16,1;UBERON:0004904,1.41e-16,1;UBERON:0001021,1.41e-16,1;UBERON:0003902,1.41e-16,1;UBERON:0005425,1.41e-16,1;UBERON:0003714,5.94e-09,2;UBERON:0005162,5.94e-09,2;UBERON:0000122,5.94e-09,2;UBERON:0008835,6.62e-07,22;UBERON:0003894,6.62e-07,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,2.48505071130865,0,0.543616824294456,0.627617077873999,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66018361923477,0,0,0,1.88212655758537,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0.163565394255844,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,5.61853127624772,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:98810580..98810585,+ | |short_description=p@chr3:98810580..98810585,+ | ||
}} | }} |
Latest revision as of 00:10, 30 July 2015
Short description: | p@chr3:98810580..98810585, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98810580..98810585, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.04e-16 | 1 |
multinucleate cell | 1.65e-16 | 1 |
myotube | 1.65e-16 | 1 |
neuronal stem cell | 1.26e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 4.72e-17 | 1 |
extrahepatic bile duct | 4.72e-17 | 1 |
common bile duct | 4.72e-17 | 1 |
duodenal papilla | 4.72e-17 | 1 |
cranial nerve II | 1.41e-16 | 1 |
cranial nerve | 1.41e-16 | 1 |
nerve trunk | 1.41e-16 | 1 |
nerve connecting eye with brain | 1.41e-16 | 1 |
nerve | 1.41e-16 | 1 |
retinal neural layer | 1.41e-16 | 1 |
presumptive neural retina | 1.41e-16 | 1 |
neural tissue | 5.94e-09 | 2 |
multi cell component structure | 5.94e-09 | 2 |
neuron projection bundle | 5.94e-09 | 2 |
hepatic diverticulum | 6.62e-07 | 22 |
liver primordium | 6.62e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.04e-16 | 1 |
meningioma | 1.04e-16 | 1 |
cystadenocarcinoma | 2.25e-16 | 1 |
mucinous cystadenocarcinoma | 2.25e-16 | 1 |
tubular adenocarcinoma | 3.43e-09 | 2 |