FFCP PHASE1:Hg19::chr15:90349765..90349774,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:90349765..90349774,-
|short_description=p10@AB462940
|description=CAGE_peak_10_at_AB462940_5end
|association_with_transcript=45bp_to_AB462940_5end
|Entre...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_AB462940_5end | |||
|cluster_id=chr15:90349765..90349774,- | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_10_at_AB462940_5end | |||
|id=chr15:90349765..90349774,- | |||
|ontology_enrichment_celltype=CL:0000048!6.29e-15!430;CL:0002057!6.35e-15!42;CL:0000723!3.59e-14!436;CL:0000860!2.87e-13!45;CL:0000034!3.33e-13!444;CL:0002371!1.49e-11!591;CL:0002320!5.13e-10!365;CL:0000766!1.02e-09!76;CL:0002009!1.37e-09!65;CL:0002194!1.71e-09!63;CL:0000576!1.71e-09!63;CL:0000040!1.71e-09!63;CL:0000559!1.71e-09!63;CL:0000557!3.69e-09!71;CL:0000055!8.10e-09!180;CL:0000839!8.78e-09!70;CL:0000134!1.55e-08!358;CL:0000144!2.06e-08!625;CL:0000680!2.09e-08!57;CL:0000056!2.09e-08!57;CL:0000355!2.09e-08!57;CL:0000183!2.98e-08!59;CL:0000057!5.08e-08!75;CL:0000187!6.51e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002583;1.59e-09;2!CL:0000860;1.28e-08;33!CL:0002057;1.28e-08;33!CL:0000775;7.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002583,1.90e-09,2;CL:0000860,4.51e-07,42;CL:0002057,4.51e-07,42;CL:0000775,6.56e-07,3;CL:0002592,9.89e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.09e-16!167;UBERON:0002371!1.84e-10!80;UBERON:0003081!3.60e-10!216;UBERON:0000926!5.56e-10!448;UBERON:0004120!5.56e-10!448;UBERON:0006603!5.56e-10!448;UBERON:0004290!1.53e-09!70;UBERON:0002384!5.78e-09!375;UBERON:0001474!6.19e-09!86;UBERON:0002390!1.83e-08!102;UBERON:0003061!1.83e-08!102;UBERON:0000914!3.57e-08!83;UBERON:0002329!3.57e-08!83;UBERON:0003077!3.57e-08!83;UBERON:0003059!3.57e-08!83;UBERON:0007282!3.57e-08!83;UBERON:0009618!3.57e-08!83;UBERON:0007285!3.57e-08!83;UBERON:0001637!5.16e-08!42;UBERON:0003509!5.16e-08!42;UBERON:0004572!5.16e-08!42;UBERON:0002405!6.50e-08!115;UBERON:0002193!8.62e-08!112;UBERON:0002385!1.14e-07!63;UBERON:0001015!1.14e-07!63;UBERON:0000383!1.14e-07!63;UBERON:0004765!1.70e-07!101;UBERON:0001434!1.70e-07!101;UBERON:0001134!2.60e-07!61;UBERON:0002036!2.60e-07!61;UBERON:0003082!2.60e-07!61;UBERON:0004573!5.28e-07!33;UBERON:0004571!5.28e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;7.72e-09;4!UBERON:0002072;2.98e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,6.88e-09,4;UBERON:0003498,3.03e-08,5;UBERON:0005985,3.03e-08,5;UBERON:0002072,3.35e-08,5;UBERON:0002204,9.71e-07,167;UBERON:0001621,9.89e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,1.26343974685366,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.726991193897824,0.377875943688809,0.242584061187816,2.32429036905685,0.822335776043652,0.309706370895104,1.7261543539329,0.512321413058201,0.709446689665756,0.344745680736619,0,0,3.01187743268168,3.0019676506363,0.898893937780338,1.83650335422542,0.641858054152187,0,1.31940520074686,2.19410023383795,0.852449501065388,0.870627715885752,0.56738522469114,1.24564449799115,0.75374599577023,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0.795285947051099,0,0,0,0,0.196468613246569,0,0,0,0,0.398873881556595,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.936480230490962,0,0.597794722207204,0.352303495931295,0.323745888736263,0.561803226808994,0.61246251376468,0.368502951935304,1.34323515528495,0,0.494533858557114,0,1.43723628363248,0,0.375355559615893,0,0,0,0,0,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0,1.35021065793013,0.389748020644795,0.252433774244115,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,2.535908257668,0,0,0.257207374262142,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.2328579353023,0.537182889719687,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,2.0694614258501,0,0,1.30325421702124,0.195801157462741,0.686286847621712,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,1.07946785661859,1.59805552781814,0.410635780069046,0,0.464841513839837,0,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0.676695028044854,0.616194468458578,0,0.551346289938122,0.644521469209642,1.16013355131383,0.255679882248303,0,0,0,0,0,0,1.25924938732256,2.0911118104818,0,0,1.73986598415015,0.55597265731176,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.117812402345686,0,1.58510321173008,1.26377536871694,0,0,0,0,0.848432591722276,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30745387020035,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0,1.10327990218877,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,2.93928624098468,0,0.082092520749339,0,0,2.34483573884932,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0.233713309847224,1.10961172300523,0.378806010550178,0.251567901752575,6.22867855117575,0,0,0.466311601748341,0.443565449968902,0.159296767163702,0.449803112163605,0.155262956876259,2.90294345488599,0.53168342911599,0,0,0.380805212168795,0,0.727394636810238,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,12.502213613487,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,2.645134202577,1.11598505450025,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,1.26343974685366,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.726991193897824,0.377875943688809,0.242584061187816,2.32429036905685,0.822335776043652,0.309706370895104,1.7261543539329,0.512321413058201,0.709446689665756,0.344745680736619,0,0,3.01187743268168,3.0019676506363,0.898893937780338,1.83650335422542,0.641858054152187,0,1.31940520074686,2.19410023383795,0.852449501065388,0.870627715885752,0.56738522469114,1.24564449799115,0.75374599577023,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0.795285947051099,0,0,0,0,0.196468613246569,0,0,0,0,0.398873881556595,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.936480230490962,0,0.597794722207204,0.352303495931295,0.323745888736263,0.561803226808994,0.61246251376468,0.368502951935304,1.34323515528495,0,0.494533858557114,0,1.43723628363248,0,0.375355559615893,0,0,0,0,0,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0,1.35021065793013,0.389748020644795,0.252433774244115,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,2.535908257668,0,0,0.257207374262142,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.2328579353023,0.537182889719687,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,2.0694614258501,0,0,1.30325421702124,0.195801157462741,0.686286847621712,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,1.07946785661859,1.59805552781814,0.410635780069046,0,0.464841513839837,0,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0.676695028044854,0.616194468458578,0,0.551346289938122,0.644521469209642,1.16013355131383,0.255679882248303,0,0,0,0,0,0,1.25924938732256,2.0911118104818,0,0,1.73986598415015,0.55597265731176,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.117812402345686,0,1.58510321173008,1.26377536871694,0,0,0,0,0.848432591722276,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30745387020035,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0,1.10327990218877,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,2.93928624098468,0,0.082092520749339,0,0,2.34483573884932,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0.233713309847224,1.10961172300523,0.378806010550178,0.251567901752575,6.22867855117575,0,0,0.466311601748341,0.443565449968902,0.159296767163702,0.449803112163605,0.155262956876259,2.90294345488599,0.53168342911599,0,0,0.380805212168795,0,0.727394636810238,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,12.502213613487,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,2.645134202577,1.11598505450025,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p10@AB462940 | |||
}} | }} |
Latest revision as of 05:24, 25 July 2015
Short description: | p10@AB462940 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_AB462940_5end |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | 45bp_to_AB462940_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 1.90e-09 | 2 |
classical monocyte | 4.51e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.51e-07 | 42 |
neutrophil | 6.56e-07 | 3 |
smooth muscle cell of the coronary artery | 9.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 6.88e-09 | 4 |
heart blood vessel | 3.03e-08 | 5 |
coronary vessel | 3.03e-08 | 5 |
hypodermis | 3.35e-08 | 5 |
musculoskeletal system | 9.71e-07 | 167 |
coronary artery | 9.89e-07 | 3 |