FFCP PHASE1:Hg19::chr15:86087267..86087274,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:86087267..86087274,+
|short_description=p37@AKAP13
|description=CAGE_peak_37_at_AKAP13_5end
|association_with_transcript=0bp_to_ENST00000558166_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11214 | |EntrezGene=11214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=371 | |HGNC=371 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558166_5end | |||
|cluster_id=chr15:86087267..86087274,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_37_at_AKAP13_5end | |||
|id=chr15:86087267..86087274,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.93e-60!42;CL:0000860!2.47e-55!45;CL:0000766!2.05e-53!76;CL:0002194!2.23e-51!63;CL:0000576!2.23e-51!63;CL:0000040!2.23e-51!63;CL:0000559!2.23e-51!63;CL:0002009!2.39e-49!65;CL:0000839!6.82e-47!70;CL:0000557!5.06e-46!71;CL:0000763!1.86e-35!112;CL:0000049!1.86e-35!112;CL:0000738!1.78e-27!140;CL:0002087!1.54e-26!119;CL:0002031!2.67e-22!124;CL:0000037!3.74e-22!172;CL:0000566!3.74e-22!172;CL:0002032!1.24e-20!165;CL:0000837!1.24e-20!165;CL:0000988!5.49e-20!182;CL:0002393!3.54e-15!9;CL:0002397!3.54e-15!9;CL:0002619!9.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-52;33!CL:0002057;1.62e-52;33!CL:0000473;3.17e-48;39!CL:0000234;3.17e-48;39!CL:0000576;5.93e-43;48!CL:0000766;2.70e-24;69!CL:0002619;3.60e-15;3!CL:0000763;1.25e-14;100!CL:0002087;1.75e-09;104!CL:0002393;6.74e-08;6!CL:0002397;6.74e-08;6!CL:0000775;1.46e-07;3!CL:0000738;1.50e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.73e-60,48;CL:0000234,8.73e-60,48;CL:0002194,2.67e-59,59;CL:0000576,2.67e-59,59;CL:0000040,2.67e-59,59;CL:0000559,2.67e-59,59;CL:0000860,3.81e-58,42;CL:0002057,3.81e-58,42;CL:0002009,3.46e-57,61;CL:0000766,2.75e-55,72;CL:0000839,1.85e-52,66;CL:0000557,1.35e-51,67;CL:0000763,1.92e-37,108;CL:0000049,1.92e-37,108;CL:0002087,1.14e-27,115;CL:0000738,2.06e-26,136;CL:0002031,2.86e-26,120;CL:0002032,5.23e-23,161;CL:0000837,5.23e-23,161;CL:0000037,8.89e-22,168;CL:0000988,2.45e-20,177;CL:0002619,2.68e-15,3;CL:0000775,1.39e-07,3;CL:0000134,6.94e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-43;42!CL:0000049;7.85e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.52e-47!102;UBERON:0003061!2.52e-47!102;UBERON:0002193!2.73e-43!112;UBERON:0002371!3.57e-39!80;UBERON:0001474!2.08e-35!86;UBERON:0002405!1.54e-30!115;UBERON:0004765!5.65e-28!101;UBERON:0001434!5.65e-28!101;UBERON:0003081!2.11e-19!216;UBERON:0007023!3.15e-18!115;UBERON:0002204!5.90e-13!167;UBERON:0000062!3.20e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;3.98e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.70e-45,76;UBERON:0001474,3.78e-41,82;UBERON:0002390,6.17e-39,98;UBERON:0003061,6.17e-39,98;UBERON:0004765,5.52e-37,90;UBERON:0002405,1.32e-35,93;UBERON:0002193,9.14e-35,108;UBERON:0001434,1.05e-32,100;UBERON:0002204,3.52e-17,167;UBERON:0003081,1.57e-15,203;UBERON:0000007,4.75e-11,2;UBERON:0000926,9.80e-08,315;UBERON:0004120,9.80e-08,315;UBERON:0006603,9.80e-08,315 | |||
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| ||
|short_description=p37@AKAP13 | |||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p37@AKAP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_AKAP13_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000558166_5end |
EntrezGene: | AKAP13 |
HGNC: | 371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.73e-60 | 48 |
phagocyte | 8.73e-60 | 48 |
monopoietic cell | 2.67e-59 | 59 |
monocyte | 2.67e-59 | 59 |
monoblast | 2.67e-59 | 59 |
promonocyte | 2.67e-59 | 59 |
classical monocyte | 3.81e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.81e-58 | 42 |
macrophage dendritic cell progenitor | 3.46e-57 | 61 |
myeloid leukocyte | 2.75e-55 | 72 |
myeloid lineage restricted progenitor cell | 1.85e-52 | 66 |
granulocyte monocyte progenitor cell | 1.35e-51 | 67 |
myeloid cell | 1.92e-37 | 108 |
common myeloid progenitor | 1.92e-37 | 108 |
nongranular leukocyte | 1.14e-27 | 115 |
leukocyte | 2.06e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 2.86e-26 | 120 |
hematopoietic oligopotent progenitor cell | 5.23e-23 | 161 |
hematopoietic multipotent progenitor cell | 5.23e-23 | 161 |
hematopoietic stem cell | 8.89e-22 | 168 |
hematopoietic cell | 2.45e-20 | 177 |
adult endothelial progenitor cell | 2.68e-15 | 3 |
neutrophil | 1.39e-07 | 3 |
mesenchymal cell | 6.94e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.70e-45 | 76 |
bone element | 3.78e-41 | 82 |
hematopoietic system | 6.17e-39 | 98 |
blood island | 6.17e-39 | 98 |
skeletal element | 5.52e-37 | 90 |
immune system | 1.32e-35 | 93 |
hemolymphoid system | 9.14e-35 | 108 |
skeletal system | 1.05e-32 | 100 |
musculoskeletal system | 3.52e-17 | 167 |
lateral plate mesoderm | 1.57e-15 | 203 |
pituitary gland | 4.75e-11 | 2 |
mesoderm | 9.80e-08 | 315 |
mesoderm-derived structure | 9.80e-08 | 315 |
presumptive mesoderm | 9.80e-08 | 315 |