FFCP PHASE1:Hg19::chr8:126104076..126104117,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286053 | |EntrezGene=286053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26513 | |HGNC=26513 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MF7,E5RHW9,E5RK09 | |UniProt=Q96MF7,E5RHW9,E5RK09 | ||
|association_with_transcript=0bp_to_ENST00000287437,ENST00000517532,ENST00000518013,ENST00000519010,ENST00000520866,ENST00000522563,ENST00000523824,NM_173685,uc003yrv.2,uc003yrw.2_5end | |association_with_transcript=0bp_to_ENST00000287437,ENST00000517532,ENST00000518013,ENST00000519010,ENST00000520866,ENST00000522563,ENST00000523824,NM_173685,uc003yrv.2,uc003yrw.2_5end | ||
|cluster_id=chr8:126104076..126104117,+ | |||
|description=CAGE_peak_1_at_NSMCE2_5end | |description=CAGE_peak_1_at_NSMCE2_5end | ||
|id=chr8:126104076..126104117,+ | |id=chr8:126104076..126104117,+ | ||
|ontology_enrichment_celltype=CL:0002194!2.24e-09!63;CL:0000576!2.24e-09!63;CL:0000040!2.24e-09!63;CL:0000559!2.24e-09!63;CL:0000839!2.73e-09!70;CL:0002009!1.07e-08!65;CL:0000860!1.09e-08!45;CL:0000763!2.44e-08!112;CL:0000049!2.44e-08!112;CL:0002057!8.05e-08!42;CL:0000766!1.32e-07!76;CL:0000557!2.87e-07!71;CL:0000037!4.20e-07!172;CL:0000566!4.20e-07!172;CL:0002032!5.74e-07!165;CL:0000837!5.74e-07!165;CL:0002087!6.68e-07!119 | |ontology_enrichment_celltype=CL:0002194!2.24e-09!63;CL:0000576!2.24e-09!63;CL:0000040!2.24e-09!63;CL:0000559!2.24e-09!63;CL:0000839!2.73e-09!70;CL:0002009!1.07e-08!65;CL:0000860!1.09e-08!45;CL:0000763!2.44e-08!112;CL:0000049!2.44e-08!112;CL:0002057!8.05e-08!42;CL:0000766!1.32e-07!76;CL:0000557!2.87e-07!71;CL:0000037!4.20e-07!172;CL:0000566!4.20e-07!172;CL:0002032!5.74e-07!165;CL:0000837!5.74e-07!165;CL:0002087!6.68e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.53e-09;39!CL:0000234;3.53e-09;39!CL:0000860;1.32e-08;33!CL:0002057;1.32e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.19e-10,48;CL:0000234,7.19e-10,48;CL:0002194,3.39e-09,59;CL:0000576,3.39e-09,59;CL:0000040,3.39e-09,59;CL:0000559,3.39e-09,59;CL:0000839,4.34e-09,66;CL:0002009,1.69e-08,61;CL:0000763,4.37e-08,108;CL:0000049,4.37e-08,108;CL:0000860,8.05e-08,42;CL:0002057,8.05e-08,42;CL:0000766,2.24e-07,72;CL:0000557,4.83e-07,67;CL:0000037,7.47e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,2.61e-07,90;UBERON:0001434,3.31e-07,100 | |||
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|short_description=p1@NSMCE2 | |short_description=p1@NSMCE2 | ||
}} | }} |
Latest revision as of 02:50, 16 September 2015
Short description: | p1@NSMCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NSMCE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000287437, ENST00000517532, ENST00000518013, ENST00000519010, ENST00000520866, ENST00000522563, ENST00000523824, NM_173685, uc003yrv.2, uc003yrw.2_5end |
EntrezGene: | NSMCE2 |
HGNC: | 26513 |
UniProt: | Q96MF7E5RHW9E5RK09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.19e-10 | 48 |
phagocyte | 7.19e-10 | 48 |
monopoietic cell | 3.39e-09 | 59 |
monocyte | 3.39e-09 | 59 |
monoblast | 3.39e-09 | 59 |
promonocyte | 3.39e-09 | 59 |
myeloid lineage restricted progenitor cell | 4.34e-09 | 66 |
macrophage dendritic cell progenitor | 1.69e-08 | 61 |
myeloid cell | 4.37e-08 | 108 |
common myeloid progenitor | 4.37e-08 | 108 |
classical monocyte | 8.05e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.05e-08 | 42 |
myeloid leukocyte | 2.24e-07 | 72 |
granulocyte monocyte progenitor cell | 4.83e-07 | 67 |
hematopoietic stem cell | 7.47e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 2.61e-07 | 90 |
skeletal system | 3.31e-07 | 100 |