FFCP PHASE1:Hg19::chr8:120613726..120613738,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:120613726..120613738,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr8:120613726..120613738,- | |description=CAGE_peak_at_chr8:120613726..120613738,- | ||
|id=chr8:120613726..120613738,- | |id=chr8:120613726..120613738,- | ||
|ontology_enrichment_celltype=CL:0002194!2.75e-24!63;CL:0000576!2.75e-24!63;CL:0000040!2.75e-24!63;CL:0000559!2.75e-24!63;CL:0002009!2.63e-23!65;CL:0000839!4.25e-21!70;CL:0000557!1.08e-20!71;CL:0002057!5.79e-20!42;CL:0000766!7.78e-19!76;CL:0000860!2.96e-18!45;CL:0002087!4.83e-18!119;CL:0000134!1.09e-16!358;CL:0002320!4.72e-16!365;CL:0000763!5.83e-16!112;CL:0000049!5.83e-16!112;CL:0000988!1.01e-15!182;CL:0000738!6.77e-15!140;CL:0002031!9.94e-15!124;CL:0000037!5.10e-14!172;CL:0000566!5.10e-14!172;CL:0000219!8.07e-14!390;CL:0002032!3.21e-13!165;CL:0000837!3.21e-13!165;CL:0002620!7.07e-13!23;CL:0000048!8.48e-12!430;CL:0000723!2.07e-11!436;CL:0000034!6.54e-11!444;CL:0000080!6.70e-11!6;CL:0002551!1.44e-10!6;CL:0000057!6.59e-10!75;CL:0002556!7.12e-07!6 | |ontology_enrichment_celltype=CL:0002194!2.75e-24!63;CL:0000576!2.75e-24!63;CL:0000040!2.75e-24!63;CL:0000559!2.75e-24!63;CL:0002009!2.63e-23!65;CL:0000839!4.25e-21!70;CL:0000557!1.08e-20!71;CL:0002057!5.79e-20!42;CL:0000766!7.78e-19!76;CL:0000860!2.96e-18!45;CL:0002087!4.83e-18!119;CL:0000134!1.09e-16!358;CL:0002320!4.72e-16!365;CL:0000763!5.83e-16!112;CL:0000049!5.83e-16!112;CL:0000988!1.01e-15!182;CL:0000738!6.77e-15!140;CL:0002031!9.94e-15!124;CL:0000037!5.10e-14!172;CL:0000566!5.10e-14!172;CL:0000219!8.07e-14!390;CL:0002032!3.21e-13!165;CL:0000837!3.21e-13!165;CL:0002620!7.07e-13!23;CL:0000048!8.48e-12!430;CL:0000723!2.07e-11!436;CL:0000034!6.54e-11!444;CL:0000080!6.70e-11!6;CL:0002551!1.44e-10!6;CL:0000057!6.59e-10!75;CL:0002556!7.12e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.76e-21;33!CL:0002057;2.76e-21;33!CL:0000473;1.71e-15;39!CL:0000234;1.71e-15;39!CL:0000576;3.59e-12;48!CL:0000946;4.67e-11;1!CL:0002574;4.67e-11;1!CL:0000786;4.67e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.29e-18,42;CL:0002057,3.29e-18,42;CL:0000473,8.68e-16,48;CL:0000234,8.68e-16,48;CL:0002194,2.15e-12,59;CL:0000576,2.15e-12,59;CL:0000040,2.15e-12,59;CL:0000559,2.15e-12,59;CL:0000988,5.14e-12,177;CL:0002009,5.91e-12,61;CL:0000946,3.63e-11,1;CL:0000786,3.63e-11,1;CL:0000980,3.63e-11,1;CL:0002574,4.91e-11,1;CL:0000839,5.67e-11,66;CL:0000557,8.56e-11,67;CL:0000766,5.69e-10,72;CL:0000763,1.55e-09,108;CL:0000049,1.55e-09,108;CL:0002087,8.78e-09,115;CL:0002032,2.02e-08,161;CL:0000837,2.02e-08,161;CL:0002031,2.37e-08,120;CL:0000037,5.49e-08,168;CL:0000738,3.51e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.44e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.47e-21!102;UBERON:0003061!4.47e-21!102;UBERON:0004765!1.67e-18!101;UBERON:0001434!1.67e-18!101;UBERON:0002193!2.36e-18!112;UBERON:0002371!1.62e-17!80;UBERON:0001474!4.13e-17!86;UBERON:0002384!3.46e-15!375;UBERON:0002405!9.40e-12!115;UBERON:0002067!6.51e-10!9;UBERON:0004016!6.51e-10!9;UBERON:0010083!6.51e-10!9;UBERON:0002204!1.45e-08!167;UBERON:0002097!1.39e-07!40;UBERON:0002199!1.59e-07!45;UBERON:0002416!1.59e-07!45;UBERON:0001758!7.12e-07!6;UBERON:0003672!7.12e-07!6 | |ontology_enrichment_uberon=UBERON:0002390!4.47e-21!102;UBERON:0003061!4.47e-21!102;UBERON:0004765!1.67e-18!101;UBERON:0001434!1.67e-18!101;UBERON:0002193!2.36e-18!112;UBERON:0002371!1.62e-17!80;UBERON:0001474!4.13e-17!86;UBERON:0002384!3.46e-15!375;UBERON:0002405!9.40e-12!115;UBERON:0002067!6.51e-10!9;UBERON:0004016!6.51e-10!9;UBERON:0010083!6.51e-10!9;UBERON:0002204!1.45e-08!167;UBERON:0002097!1.39e-07!40;UBERON:0002199!1.59e-07!45;UBERON:0002416!1.59e-07!45;UBERON:0001758!7.12e-07!6;UBERON:0003672!7.12e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.00e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.79e-13,98;UBERON:0003061,7.79e-13,98;UBERON:0002193,1.73e-11,108;UBERON:0002331,9.56e-10,10;UBERON:0000358,9.56e-10,10;UBERON:0000307,9.56e-10,10;UBERON:0000091,9.56e-10,10;UBERON:0000087,9.56e-10,10;UBERON:0007010,9.56e-10,10;UBERON:0007806,9.56e-10,10;UBERON:0008780,9.56e-10,10;UBERON:0005728,9.56e-10,10;UBERON:0002371,2.17e-09,76;UBERON:0001474,1.27e-08,82;UBERON:0004765,9.31e-08,90;UBERON:0002405,1.80e-07,93;UBERON:0001434,7.21e-07,100 | |||
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| ||
|short_description=p@chr8:120613726..120613738,- | |short_description=p@chr8:120613726..120613738,- | ||
}} | }} |
Latest revision as of 14:25, 31 July 2015
Short description: | p@chr8:120613726..120613738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:120613726..120613738, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.29e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.29e-18 | 42 |
defensive cell | 8.68e-16 | 48 |
phagocyte | 8.68e-16 | 48 |
monopoietic cell | 2.15e-12 | 59 |
monocyte | 2.15e-12 | 59 |
monoblast | 2.15e-12 | 59 |
promonocyte | 2.15e-12 | 59 |
hematopoietic cell | 5.14e-12 | 177 |
macrophage dendritic cell progenitor | 5.91e-12 | 61 |
antibody secreting cell | 3.63e-11 | 1 |
plasma cell | 3.63e-11 | 1 |
plasmablast | 3.63e-11 | 1 |
stromal cell of pancreas | 4.91e-11 | 1 |
myeloid lineage restricted progenitor cell | 5.67e-11 | 66 |
granulocyte monocyte progenitor cell | 8.56e-11 | 67 |
myeloid leukocyte | 5.69e-10 | 72 |
myeloid cell | 1.55e-09 | 108 |
common myeloid progenitor | 1.55e-09 | 108 |
nongranular leukocyte | 8.78e-09 | 115 |
hematopoietic oligopotent progenitor cell | 2.02e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.02e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 2.37e-08 | 120 |
hematopoietic stem cell | 5.49e-08 | 168 |
leukocyte | 3.51e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.79e-13 | 98 |
blood island | 7.79e-13 | 98 |
hemolymphoid system | 1.73e-11 | 108 |
umbilical cord | 9.56e-10 | 10 |
blastocyst | 9.56e-10 | 10 |
blastula | 9.56e-10 | 10 |
bilaminar disc | 9.56e-10 | 10 |
inner cell mass | 9.56e-10 | 10 |
cleaving embryo | 9.56e-10 | 10 |
connecting stalk | 9.56e-10 | 10 |
inner cell mass derived epiblast | 9.56e-10 | 10 |
extraembryonic mesoderm | 9.56e-10 | 10 |
bone marrow | 2.17e-09 | 76 |
bone element | 1.27e-08 | 82 |
skeletal element | 9.31e-08 | 90 |
immune system | 1.80e-07 | 93 |
skeletal system | 7.21e-07 | 100 |