FFCP PHASE1:Hg19::chr8:117886706..117886710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5885 | |EntrezGene=5885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |HGNC=9811 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIN7 | |UniProt=E5RIN7 | ||
|association_with_transcript=-43bp_to_ENST00000520992_5end | |association_with_transcript=-43bp_to_ENST00000520992_5end | ||
|cluster_id=chr8:117886706..117886710,- | |||
|description=CAGE_peak_14_at_RAD21_5end | |description=CAGE_peak_14_at_RAD21_5end | ||
|id=chr8:117886706..117886710,- | |id=chr8:117886706..117886710,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.22e-15;3!CL:0000511;2.32e-12;1!CL:0002625;2.32e-12;1!CL:0002127;2.32e-12;1!CL:0000911;2.32e-12;1!CL:0000216;2.32e-12;1!CL:0000814;2.32e-12;1!CL:0000084;2.44e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,2.05e-15,3;CL:0002127,1.11e-12,1;CL:0000914,1.11e-12,1;CL:0000911,1.11e-12,1;CL:0000814,1.11e-12,1;CL:0002042,1.11e-12,1;CL:0002039,1.11e-12,1;CL:0002040,1.11e-12,1;CL:0002041,1.11e-12,1;CL:0000511,1.75e-12,1;CL:0002625,1.75e-12,1;CL:0000216,1.75e-12,1;CL:0000084,2.52e-07,25;CL:0000827,2.52e-07,25;CL:0000893,5.73e-07,2;CL:0002489,5.73e-07,2;CL:0000809,5.73e-07,2;CL:0000808,5.73e-07,2;CL:0000894,5.73e-07,2;CL:0000806,5.73e-07,2;CL:0000807,5.73e-07,2;CL:0000805,5.73e-07,2;CL:0002425,5.73e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;8.28e-07;2 | |||
|ontology_enrichment_disease=DOID:14566!1.39e-19!239;DOID:162!1.41e-19!235;DOID:2531!8.92e-12!51;DOID:0060083!8.92e-12!51;DOID:0050686!9.95e-11!137;DOID:0050687!1.11e-07!143;DOID:1240!1.50e-07!39;DOID:305!3.57e-07!106;DOID:0060058!3.63e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:9119;2.32e-12;1!DOID:1240;2.53e-07;39!DOID:2531;6.36e-07;51!DOID:0060083;6.36e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.40e-12,1;DOID:1240,6.56e-10,39;DOID:2531,1.76e-07,51;DOID:0060083,1.76e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001557!2.06e-09!19;UBERON:0001737!3.50e-09!9 | |ontology_enrichment_uberon=UBERON:0001557!2.06e-09!19;UBERON:0001737!3.50e-09!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.32e-12;1!UBERON:0001343;2.32e-12;1!UBERON:0004910;2.32e-12;1!UBERON:0004813;2.32e-12;1!UBERON:0003688;2.81e-08;6!UBERON:0002358;2.81e-08;6!UBERON:0003684;2.81e-08;6!UBERON:0001178;2.81e-08;6!UBERON:0004909;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.75e-12,1;UBERON:0001343,1.75e-12,1;UBERON:0004910,1.75e-12,1;UBERON:0005154,1.75e-12,1;UBERON:0005295,1.75e-12,1;UBERON:0004813,1.75e-12,1;UBERON:0005297,1.75e-12,1;UBERON:0005294,1.75e-12,1;UBERON:0010141,1.75e-12,1;UBERON:0005891,1.75e-12,1;UBERON:0003688,3.63e-08,6;UBERON:0002358,3.63e-08,6;UBERON:0003684,3.63e-08,6;UBERON:0001178,3.63e-08,6;UBERON:0004909,7.20e-07,2 | |||
|phase1_expression=0.181678379270557,0.642301571672949,1.12763523276777,0,1.34088328328186,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.668462741311041,0,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.487185025805993,0.252433774244115,0,0,0,0.10075209822764,0.508681776931463,0,0,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.354920400119532,0.842923450390509,1.20505514941741,0.882351781859152,0.871517776369625,1.18635309555548,0.674156540800822,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0,0,2.95597942737566,0.792435906119034,0.207328115540772,0.288239906833923,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0.306923946576125,0,0.512556597022804,0.511707249066704,0.965123526861645,0,0.308419387605311,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.742585499285292,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0,0.0852266274161009,0.267096106940212,0,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.721346064882224,3.55709216742071,0.956557636372934,0.798317485731266,0,0.211673582723883,0,0.280797178113459,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0.447352215784832,0.500547425135725,0,0.278406173895242,0,0,1.6653598399891,0,0,0.146508179271894,0.121360521749513,1.33732061132974,0.284136146806413,0,0,0,0,0,0,0.494411622680279,6.75601306009579,0,0,0,0.306806047506464,0.123084805461069,0.311039587661807,0.179736702294654,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0.291604613383254,0.694499979733169,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,1.72678282034527,0,0.225595660617181,0,0.167821586975843,0,0.476809736941136,0.210998064528027,0,0.282706142867882,0,0,0,0,0.593042257361244,0.370691816839509,0.417687798021821,0.269604531922708,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.126373159256976,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.343972064943233,0.774050650312681,0.877071805034227,0.821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,1.60351234632282,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0.313808538937,0.407992870545287,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0.0984274815147488,0.169346664131569,0,0,0,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0.410462603746695,0.170388021785422,0.226624183040251,0,0,0,0,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.686791410365586,0.336749488765919,0,0,0.857766365499703,0,0,0,0.244736704506468,0.179088841081487,1.54400723580486,0.21928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| |phase1_expression=0.181678379270557,0.642301571672949,1.12763523276777,0,1.34088328328186,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.668462741311041,0,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.487185025805993,0.252433774244115,0,0,0,0.10075209822764,0.508681776931463,0,0,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.354920400119532,0.842923450390509,1.20505514941741,0.882351781859152,0.871517776369625,1.18635309555548,0.674156540800822,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0,0,2.95597942737566,0.792435906119034,0.207328115540772,0.288239906833923,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0.306923946576125,0,0.512556597022804,0.511707249066704,0.965123526861645,0,0.308419387605311,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.742585499285292,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0,0.0852266274161009,0.267096106940212,0,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.721346064882224,3.55709216742071,0.956557636372934,0.798317485731266,0,0.211673582723883,0,0.280797178113459,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0.447352215784832,0.500547425135725,0,0.278406173895242,0,0,1.6653598399891,0,0,0.146508179271894,0.121360521749513,1.33732061132974,0.284136146806413,0,0,0,0,0,0,0.494411622680279,6.75601306009579,0,0,0,0.306806047506464,0.123084805461069,0.311039587661807,0.179736702294654,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0.291604613383254,0.694499979733169,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,1.72678282034527,0,0.225595660617181,0,0.167821586975843,0,0.476809736941136,0.210998064528027,0,0.282706142867882,0,0,0,0,0.593042257361244,0.370691816839509,0.417687798021821,0.269604531922708,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.126373159256976,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.343972064943233,0.774050650312681,0.877071805034227,0.821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,1.60351234632282,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0.313808538937,0.407992870545287,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0.0984274815147488,0.169346664131569,0,0,0,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0.410462603746695,0.170388021785422,0.226624183040251,0,0,0,0,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.686791410365586,0.336749488765919,0,0,0.857766365499703,0,0,0,0.244736704506468,0.179088841081487,1.54400723580486,0.21928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| ||
|short_description=p14@RAD21 | |short_description=p14@RAD21 | ||
}} | }} |
Latest revision as of 19:06, 15 September 2015
Short description: | p14@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RAD21_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000520992_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | E5RIN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.05e-15 | 3 |
innate effector T cell | 1.11e-12 | 1 |
immature NK T cell | 1.11e-12 | 1 |
effector T cell | 1.11e-12 | 1 |
mature NK T cell | 1.11e-12 | 1 |
immature NK T cell stage IV | 1.11e-12 | 1 |
immature NK T cell stage I | 1.11e-12 | 1 |
immature NK T cell stage II | 1.11e-12 | 1 |
immature NK T cell stage III | 1.11e-12 | 1 |
androgen binding protein secreting cell | 1.75e-12 | 1 |
seminiferous tubule epithelial cell | 1.75e-12 | 1 |
Sertoli cell | 1.75e-12 | 1 |
T cell | 2.52e-07 | 25 |
pro-T cell | 2.52e-07 | 25 |
thymocyte | 5.73e-07 | 2 |
double negative thymocyte | 5.73e-07 | 2 |
double-positive, alpha-beta thymocyte | 5.73e-07 | 2 |
DN4 thymocyte | 5.73e-07 | 2 |
DN1 thymic pro-T cell | 5.73e-07 | 2 |
DN2 thymocyte | 5.73e-07 | 2 |
DN3 thymocyte | 5.73e-07 | 2 |
immature single positive thymocyte | 5.73e-07 | 2 |
early T lineage precursor | 5.73e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.75e-12 | 1 |
seminiferous tubule of testis | 1.75e-12 | 1 |
epithelium of male gonad | 1.75e-12 | 1 |
epithelial cord | 1.75e-12 | 1 |
sex cord | 1.75e-12 | 1 |
seminiferous tubule epithelium | 1.75e-12 | 1 |
testis sex cord | 1.75e-12 | 1 |
genital ridge | 1.75e-12 | 1 |
primitive sex cord of indifferent gonad | 1.75e-12 | 1 |
coelomic epithelium | 1.75e-12 | 1 |
omentum | 3.63e-08 | 6 |
peritoneum | 3.63e-08 | 6 |
abdominal cavity | 3.63e-08 | 6 |
visceral peritoneum | 3.63e-08 | 6 |
epithelium of gonad | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.40e-12 | 1 |
leukemia | 6.56e-10 | 39 |
hematologic cancer | 1.76e-07 | 51 |
immune system cancer | 1.76e-07 | 51 |