FFCP PHASE1:Hg19::chr8:117878863..117878874,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5885 | |EntrezGene=5885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |HGNC=9811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=355bp_to_ENST00000519469_5end | |association_with_transcript=355bp_to_ENST00000519469_5end | ||
|cluster_id=chr8:117878863..117878874,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_15_at_RAD21_5end | |description=CAGE_peak_15_at_RAD21_5end | ||
|id=chr8:117878863..117878874,- | |id=chr8:117878863..117878874,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;8.29e-19;3!CL:0002623;1.48e-18;3!CL:0000622;1.58e-11;5!CL:0000154;9.25e-10;6!CL:0002549;6.35e-08;2!CL:0002588;6.35e-08;2!CL:0000150;8.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,6.06e-19,3;CL:0002623,1.94e-18,3;CL:0000622,1.85e-11,5;CL:0000154,1.06e-09,6;CL:0002549,4.38e-08,2;CL:0002588,7.03e-08,2;CL:0000150,9.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.50e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-10!115;UBERON:0001737!5.40e-09!9;UBERON:0001557!3.86e-08!19;UBERON:0002616!6.91e-08!59;UBERON:0000481!3.99e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!3.20e-10!115;UBERON:0001737!5.40e-09!9;UBERON:0001557!3.86e-08!19;UBERON:0002616!6.91e-08!59;UBERON:0000481!3.99e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0005284;1.58e-11;5!UBERON:0003688;6.94e-10;6!UBERON:0002358;6.94e-10;6!UBERON:0003684;6.94e-10;6!UBERON:0001178;6.94e-10;6!UBERON:0001044;9.25e-10;6!UBERON:0003293;9.25e-10;6!UBERON:0003294;9.25e-10;6!UBERON:0010047;9.25e-10;6!UBERON:0003408;9.25e-10;6!UBERON:0000167;9.25e-10;6!UBERON:0001041;4.36e-09;14!UBERON:0001897;6.35e-08;2!UBERON:0005629;6.35e-08;2!UBERON:0005358;6.35e-08;2!UBERON:0001886;6.35e-08;2!UBERON:0004086;6.35e-08;2!UBERON:0010225;6.35e-08;2!UBERON:0005282;6.35e-08;2!UBERON:0005281;6.35e-08;2!UBERON:0004457;7.10e-07;9!UBERON:0000042;7.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,1.15e-11,5;UBERON:0003688,5.94e-10,6;UBERON:0002358,5.94e-10,6;UBERON:0003684,5.94e-10,6;UBERON:0001178,5.94e-10,6;UBERON:0001044,1.06e-09,6;UBERON:0003293,1.06e-09,6;UBERON:0003294,1.06e-09,6;UBERON:0010047,1.06e-09,6;UBERON:0000167,1.06e-09,6;UBERON:0005629,4.38e-08,2;UBERON:0005358,4.38e-08,2;UBERON:0001886,4.38e-08,2;UBERON:0004086,4.38e-08,2;UBERON:0005282,4.38e-08,2;UBERON:0005281,4.38e-08,2;UBERON:0001897,5.74e-08,2;UBERON:0010225,5.74e-08,2 | |||
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| ||
|short_description=p15@RAD21 | |short_description=p15@RAD21 | ||
}} | }} |
Latest revision as of 18:44, 15 September 2015
Short description: | p15@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RAD21_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 355bp_to_ENST00000519469_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 6.06e-19 | 3 |
acinar cell of salivary gland | 1.94e-18 | 3 |
acinar cell | 1.85e-11 | 5 |
protein secreting cell | 1.06e-09 | 6 |
fibroblast of choroid plexus | 4.38e-08 | 2 |
smooth muscle cell of the umbilical vein | 7.03e-08 | 2 |
glandular epithelial cell | 9.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 1.15e-11 | 5 |
omentum | 5.94e-10 | 6 |
peritoneum | 5.94e-10 | 6 |
abdominal cavity | 5.94e-10 | 6 |
visceral peritoneum | 5.94e-10 | 6 |
saliva-secreting gland | 1.06e-09 | 6 |
gland of oral region | 1.06e-09 | 6 |
gland of foregut | 1.06e-09 | 6 |
oral gland | 1.06e-09 | 6 |
oral cavity | 1.06e-09 | 6 |
vascular plexus | 4.38e-08 | 2 |
ventricle of nervous system | 4.38e-08 | 2 |
choroid plexus | 4.38e-08 | 2 |
brain ventricle | 4.38e-08 | 2 |
ventricular system of brain | 4.38e-08 | 2 |
ventricular system of central nervous system | 4.38e-08 | 2 |
dorsal plus ventral thalamus | 5.74e-08 | 2 |
thalamic complex | 5.74e-08 | 2 |