FFCP PHASE1:Hg19::chr8:11333411..11333431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11333411..11333431,- | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_at_chr8:11333411..11333431,- | |description=CAGE_peak_at_chr8:11333411..11333431,- | ||
|id=chr8:11333411..11333431,- | |id=chr8:11333411..11333431,- | ||
|ontology_enrichment_celltype=CL:0002195!1.20e-08!2;CL:0002571!1.20e-08!2;CL:1000306!1.93e-08!4;CL:0002547!1.93e-08!4;CL:0002593!2.09e-08!2;CL:0002595!2.27e-07!5 | |ontology_enrichment_celltype=CL:0002195!1.20e-08!2;CL:0002571!1.20e-08!2;CL:1000306!1.93e-08!4;CL:0002547!1.93e-08!4;CL:0002593!2.09e-08!2;CL:0002595!2.27e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.34e-20;5!CL:0002593;1.29e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.48e-20,5;CL:0002593,1.55e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.89e-45;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.91e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002046!6.24e-13!5;UBERON:0004117!6.24e-13!5;UBERON:0007689!6.24e-13!5;UBERON:0007123!6.24e-13!5;UBERON:0003091!6.24e-13!5;UBERON:0000415!1.93e-08!4;UBERON:0007240!1.93e-08!4;UBERON:0005742!1.93e-08!4;UBERON:0005734!1.93e-08!4;UBERON:0004664!1.93e-08!4;UBERON:0004663!1.93e-08!4;UBERON:0002456!2.09e-08!2;UBERON:0003834!2.27e-07!5;UBERON:0001533!2.27e-07!5;UBERON:0004573!3.18e-07!33;UBERON:0004571!3.18e-07!33 | |ontology_enrichment_uberon=UBERON:0002046!6.24e-13!5;UBERON:0004117!6.24e-13!5;UBERON:0007689!6.24e-13!5;UBERON:0007123!6.24e-13!5;UBERON:0003091!6.24e-13!5;UBERON:0000415!1.93e-08!4;UBERON:0007240!1.93e-08!4;UBERON:0005742!1.93e-08!4;UBERON:0005734!1.93e-08!4;UBERON:0004664!1.93e-08!4;UBERON:0004663!1.93e-08!4;UBERON:0002456!2.09e-08!2;UBERON:0003834!2.27e-07!5;UBERON:0001533!2.27e-07!5;UBERON:0004573!3.18e-07!33;UBERON:0004571!3.18e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.89e-45;5!UBERON:0003834;1.34e-20;5!UBERON:0001533;1.34e-20;5!UBERON:0003513;5.04e-15;7!UBERON:0002456;1.29e-13;2!UBERON:0002368;2.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.89e-45,5;UBERON:0004117,1.89e-45,5;UBERON:0007689,1.89e-45,5;UBERON:0007123,1.89e-45,5;UBERON:0003091,1.89e-45,5;UBERON:0009722,3.79e-21,11;UBERON:0007690,3.79e-21,11;UBERON:0003834,1.48e-20,5;UBERON:0001533,1.48e-20,5;UBERON:0003513,5.41e-15,7;UBERON:0002456,1.55e-13,2;UBERON:0008814,3.20e-13,18;UBERON:0002368,4.12e-07,35 | |||
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| ||
|short_description=p@chr8:11333411..11333431,- | |short_description=p@chr8:11333411..11333431,- | ||
}} | }} |
Latest revision as of 14:05, 31 July 2015
Short description: | p@chr8:11333411..11333431, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11333411..11333431, - |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.48e-20 | 5 |
smooth muscle cell of the internal thoracic artery | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.89e-45 | 5 |
pharyngeal pouch | 1.89e-45 | 5 |
thyroid diverticulum | 1.89e-45 | 5 |
pharyngeal pouch 2 | 1.89e-45 | 5 |
thyroid primordium | 1.89e-45 | 5 |
entire pharyngeal arch endoderm | 3.79e-21 | 11 |
early pharyngeal endoderm | 3.79e-21 | 11 |
thoracic segment blood vessel | 1.48e-20 | 5 |
subclavian artery | 1.48e-20 | 5 |
trunk blood vessel | 5.41e-15 | 7 |
internal thoracic artery | 1.55e-13 | 2 |
pharyngeal arch system | 3.20e-13 | 18 |
endocrine gland | 4.12e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.00e-08 | 14 |