FFCP PHASE1:Hg19::chr15:78799864..78799873,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:78799864..78799873,+
|short_description=p3@AGPHD1
|description=CAGE_peak_3_at_AGPHD1_5end
|association_with_transcript=-32bp_to_ENST00000360519,ENST000003...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123688 | |EntrezGene=123688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34403 | |HGNC=34403 | ||
|TSSclassifier=strong | |||
|UniProt=A2RU49,F8W6X5 | |UniProt=A2RU49,F8W6X5 | ||
|association_with_transcript=-32bp_to_ENST00000360519,ENST00000388988,ENST00000408962,NM_001013619,NM_001083612,uc002bdt.2,uc010ble.2,uc010unc.1_5end | |||
|cluster_id=chr15:78799864..78799873,+ | |||
|description=CAGE_peak_3_at_AGPHD1_5end | |||
|id=chr15:78799864..78799873,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000746;5.01e-08;3!CL:0002615;6.78e-08;3!CL:0000136;5.11e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,4.84e-08,3;CL:0000513,4.84e-08,3;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000513;5.01e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.70e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000475!8.33e-10!365;UBERON:0007023!3.80e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;3.34e-11;2!UBERON:0002369;6.78e-08;3!UBERON:0001235;6.78e-08;3!UBERON:0006858;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,2.47e-11,2;UBERON:0002369,6.78e-08,3;UBERON:0001235,6.78e-08,3;UBERON:0006858,6.78e-08,3 | |||
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| ||
|short_description=p3@AGPHD1 | |||
}} | }} |
Latest revision as of 07:02, 19 September 2015
Short description: | p3@AGPHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGPHD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000360519, ENST00000388988, ENST00000408962, NM_001013619, NM_001083612, uc002bdt.2, uc010ble.2, uc010unc.1_5end |
EntrezGene: | AGPHD1 |
HGNC: | 34403 |
UniProt: | A2RU49F8W6X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 4.84e-08 | 3 |
cardiac muscle myoblast | 4.84e-08 | 3 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
amygdala | 2.47e-11 | 2 |
adrenal gland | 6.78e-08 | 3 |
adrenal cortex | 6.78e-08 | 3 |
adrenal/interrenal gland | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.70e-11 | 2 |