FFCP PHASE1:Hg19::chr7:44500049..44500072,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:44500049..44500072,- | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr7:44500049..44500072,- | |description=CAGE_peak_at_chr7:44500049..44500072,- | ||
|id=chr7:44500049..44500072,- | |id=chr7:44500049..44500072,- | ||
|ontology_enrichment_celltype=CL:0000542!1.32e-14!53;CL:0000051!1.32e-14!53;CL:0000148!3.50e-14!10;CL:0000541!3.50e-14!10;CL:0000838!3.91e-13!52;CL:0000945!1.52e-11!24;CL:0000826!1.52e-11!24;CL:0002567!1.84e-10!3;CL:0000147!8.29e-10!14;CL:0000710!2.30e-08!20;CL:0000037!5.92e-08!172;CL:0000566!5.92e-08!172;CL:0002032!8.18e-08!165;CL:0000837!8.18e-08!165;CL:0000988!3.84e-07!182;CL:0000785!4.59e-07!2;CL:0000955!4.59e-07!2;CL:0000818!4.59e-07!2;CL:0000954!4.59e-07!2;CL:0000816!4.59e-07!2;CL:0002077!6.22e-07!33 | |ontology_enrichment_celltype=CL:0000542!1.32e-14!53;CL:0000051!1.32e-14!53;CL:0000148!3.50e-14!10;CL:0000541!3.50e-14!10;CL:0000838!3.91e-13!52;CL:0000945!1.52e-11!24;CL:0000826!1.52e-11!24;CL:0002567!1.84e-10!3;CL:0000147!8.29e-10!14;CL:0000710!2.30e-08!20;CL:0000037!5.92e-08!172;CL:0000566!5.92e-08!172;CL:0002032!8.18e-08!165;CL:0000837!8.18e-08!165;CL:0000988!3.84e-07!182;CL:0000785!4.59e-07!2;CL:0000955!4.59e-07!2;CL:0000818!4.59e-07!2;CL:0000954!4.59e-07!2;CL:0000816!4.59e-07!2;CL:0002077!6.22e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.07e-33;3!CL:0000945;3.19e-29;24!CL:0000946;1.05e-12;1!CL:0000786;1.05e-12;1!CL:0000148;1.78e-10;10!CL:0000542;6.85e-10;53!CL:0000147;1.25e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.85e-33,3;CL:0000945,3.08e-29,24;CL:0000826,3.08e-29,24;CL:0000542,7.45e-20,53;CL:0000051,7.45e-20,53;CL:0000838,2.07e-16,52;CL:0000946,9.92e-13,1;CL:0000786,9.92e-13,1;CL:0000980,9.92e-13,1;CL:0000148,1.72e-10,10;CL:0000541,1.72e-10,10;CL:0002087,2.42e-08,115;CL:0000147,1.22e-07,14;CL:0000785,5.41e-07,2;CL:0000955,5.41e-07,2;CL:0000818,5.41e-07,2;CL:0000954,5.41e-07,2;CL:0000816,5.41e-07,2;CL:0000738,7.51e-07,136;CL:0002032,8.24e-07,161;CL:0000837,8.24e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;6.85e-10;53!CL:0000954;5.57e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!1.10e-24!51;DOID:0060083!1.10e-24!51;DOID:0060058!8.54e-23!10;DOID:1240!6.64e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:630;7.02e-13;1!DOID:0050177;7.02e-13;1!DOID:0050427;7.02e-13;1!DOID:2355;1.56e-12;1!DOID:12603;3.08e-12;1!DOID:74;6.80e-07;2!DOID:1909;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.03e-13,1;DOID:0050177,7.03e-13,1;DOID:0050427,7.03e-13,1;DOID:2355,1.57e-12,1;DOID:12603,1.96e-12,1;DOID:74,6.80e-07,2;DOID:1909,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.85e-09!7;UBERON:0002370!8.30e-07!4;UBERON:0005058!8.30e-07!4;UBERON:0009113!8.30e-07!4;UBERON:0003295!8.30e-07!4;UBERON:0005562!8.30e-07!4 | |ontology_enrichment_uberon=UBERON:0004177!1.85e-09!7;UBERON:0002370!8.30e-07!4;UBERON:0005058!8.30e-07!4;UBERON:0009113!8.30e-07!4;UBERON:0003295!8.30e-07!4;UBERON:0005562!8.30e-07!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18286014030742,5.41863890369642,4.80135766013443,0,0,0,0,0,0,7.28191685454835,0.995184627411951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.552700035571697,0.869409257205157,0.296573126324121,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0.176096868026452,0,0,0,0.444485260045183,1.14596527667483,2.34434894420094,1.71072446022705,0.205654985406647,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85803175125719,0,0.924843963529383,0,0.399158742865633,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,2.58478091468246,0,0.0898683511473268,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.953619473882272,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50746117111426,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66814029295813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.994581110581374,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,5.87693336534474,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0,10.8993287383099 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18286014030742,5.41863890369642,4.80135766013443,0,0,0,0,0,0,7.28191685454835,0.995184627411951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.552700035571697,0.869409257205157,0.296573126324121,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0.176096868026452,0,0,0,0.444485260045183,1.14596527667483,2.34434894420094,1.71072446022705,0.205654985406647,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85803175125719,0,0.924843963529383,0,0.399158742865633,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,2.58478091468246,0,0.0898683511473268,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.953619473882272,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50746117111426,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66814029295813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.994581110581374,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,5.87693336534474,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0,10.8993287383099 | ||
|short_description=p@chr7:44500049..44500072,- | |short_description=p@chr7:44500049..44500072,- | ||
}} | }} |
Latest revision as of 10:13, 31 July 2015
Short description: | p@chr7:44500049..44500072, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:44500049..44500072, - |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.85e-33 | 3 |
lymphocyte of B lineage | 3.08e-29 | 24 |
pro-B cell | 3.08e-29 | 24 |
lymphocyte | 7.45e-20 | 53 |
common lymphoid progenitor | 7.45e-20 | 53 |
lymphoid lineage restricted progenitor cell | 2.07e-16 | 52 |
antibody secreting cell | 9.92e-13 | 1 |
plasma cell | 9.92e-13 | 1 |
plasmablast | 9.92e-13 | 1 |
melanocyte | 1.72e-10 | 10 |
melanoblast | 1.72e-10 | 10 |
nongranular leukocyte | 2.42e-08 | 115 |
pigment cell | 1.22e-07 | 14 |
mature B cell | 5.41e-07 | 2 |
pre-B-II cell | 5.41e-07 | 2 |
transitional stage B cell | 5.41e-07 | 2 |
small pre-B-II cell | 5.41e-07 | 2 |
immature B cell | 5.41e-07 | 2 |
leukocyte | 7.51e-07 | 136 |
hematopoietic oligopotent progenitor cell | 8.24e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.24e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.03e-13 | 1 |
monogenic disease | 7.03e-13 | 1 |
xeroderma pigmentosum | 7.03e-13 | 1 |
anemia | 1.57e-12 | 1 |
acute leukemia | 1.96e-12 | 1 |
hematopoietic system disease | 6.80e-07 | 2 |
melanoma | 8.52e-07 | 2 |