FFCP PHASE1:Hg19::chr7:40174565..40174621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79783 | |EntrezGene=79783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16001 | |HGNC=16001 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAC7,Q4KMW8,B7Z568 | |UniProt=Q9HAC7,Q4KMW8,B7Z568 | ||
|association_with_transcript=0bp_to_ENST00000309930,ENST00000335693,ENST00000401647,ENST00000413931,ENST00000416370,ENST00000444074,ENST00000540834,NM_001193311,NM_001193312,NM_001193313,NM_024728,uc003thm.1,uc003thn.1,uc003tho.1_5end | |association_with_transcript=0bp_to_ENST00000309930,ENST00000335693,ENST00000401647,ENST00000413931,ENST00000416370,ENST00000444074,ENST00000540834,NM_001193311,NM_001193312,NM_001193313,NM_024728,uc003thm.1,uc003thn.1,uc003tho.1_5end | ||
|cluster_id=chr7:40174565..40174621,+ | |||
|description=CAGE_peak_1_at_C7orf10_5end | |description=CAGE_peak_1_at_C7orf10_5end | ||
|id=chr7:40174565..40174621,+ | |id=chr7:40174565..40174621,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.52e-18!180;CL:0000057!2.15e-10!75 | |ontology_enrichment_celltype=CL:0000055!4.52e-18!180;CL:0000057!2.15e-10!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.11e-11,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.56e-20!365;UBERON:0000481!3.25e-18!347;UBERON:0000914!4.79e-11!83;UBERON:0002329!4.79e-11!83;UBERON:0003077!4.79e-11!83;UBERON:0003059!4.79e-11!83;UBERON:0007282!4.79e-11!83;UBERON:0009618!4.79e-11!83;UBERON:0007285!4.79e-11!83;UBERON:0005256!1.17e-10!143;UBERON:0002100!4.23e-10!216;UBERON:0000119!2.01e-09!312;UBERON:0000483!3.81e-09!309;UBERON:0004290!1.11e-08!70;UBERON:0000924!1.83e-08!173;UBERON:0006601!1.83e-08!173;UBERON:0000033!5.86e-08!123;UBERON:0002385!8.75e-08!63;UBERON:0001015!8.75e-08!63;UBERON:0000383!8.75e-08!63;UBERON:0003104!1.12e-07!238;UBERON:0009142!1.12e-07!238;UBERON:0000486!2.15e-07!82;UBERON:0000153!2.37e-07!129;UBERON:0007811!2.37e-07!129;UBERON:0004121!2.40e-07!169;UBERON:0001134!3.43e-07!61;UBERON:0002036!3.43e-07!61;UBERON:0003082!3.43e-07!61;UBERON:0003102!4.21e-07!95 | |ontology_enrichment_uberon=UBERON:0000475!9.56e-20!365;UBERON:0000481!3.25e-18!347;UBERON:0000914!4.79e-11!83;UBERON:0002329!4.79e-11!83;UBERON:0003077!4.79e-11!83;UBERON:0003059!4.79e-11!83;UBERON:0007282!4.79e-11!83;UBERON:0009618!4.79e-11!83;UBERON:0007285!4.79e-11!83;UBERON:0005256!1.17e-10!143;UBERON:0002100!4.23e-10!216;UBERON:0000119!2.01e-09!312;UBERON:0000483!3.81e-09!309;UBERON:0004290!1.11e-08!70;UBERON:0000924!1.83e-08!173;UBERON:0006601!1.83e-08!173;UBERON:0000033!5.86e-08!123;UBERON:0002385!8.75e-08!63;UBERON:0001015!8.75e-08!63;UBERON:0000383!8.75e-08!63;UBERON:0003104!1.12e-07!238;UBERON:0009142!1.12e-07!238;UBERON:0000486!2.15e-07!82;UBERON:0000153!2.37e-07!129;UBERON:0007811!2.37e-07!129;UBERON:0004121!2.40e-07!169;UBERON:0001134!3.43e-07!61;UBERON:0002036!3.43e-07!61;UBERON:0003082!3.43e-07!61;UBERON:0003102!4.21e-07!95 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.49e-13,160;UBERON:0009142,2.49e-13,160;UBERON:0010314,9.53e-10,132;UBERON:0000119,1.17e-09,309;UBERON:0000483,2.24e-09,306;UBERON:0007524,3.07e-09,73;UBERON:0004121,3.49e-09,171;UBERON:0000924,3.49e-09,171;UBERON:0006601,3.49e-09,171;UBERON:0002329,4.46e-09,71;UBERON:0003059,4.46e-09,71;UBERON:0007282,4.46e-09,71;UBERON:0004290,4.46e-09,71;UBERON:0009618,4.46e-09,71;UBERON:0003077,5.17e-09,72;UBERON:0007285,5.17e-09,72;UBERON:0005256,2.21e-08,122;UBERON:0002385,3.64e-08,64;UBERON:0001015,3.64e-08,64;UBERON:0000383,3.64e-08,64;UBERON:0007503,4.29e-08,78;UBERON:0003102,9.69e-08,99;UBERON:0001134,1.47e-07,62;UBERON:0002036,1.47e-07,62;UBERON:0003082,1.47e-07,62;UBERON:0000486,1.55e-07,83;UBERON:0002100,2.19e-07,199;UBERON:0000033,3.30e-07,56 | |||
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| ||
|short_description=p1@C7orf10 | |short_description=p1@C7orf10 | ||
}} | }} |
Latest revision as of 13:47, 18 September 2015
Short description: | p1@C7orf10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C7orf10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309930, ENST00000335693, ENST00000401647, ENST00000413931, ENST00000416370, ENST00000444074, ENST00000540834, NM_001193311, NM_001193312, NM_001193313, NM_024728, uc003thm.1, uc003thn.1, uc003tho.1_5end |
EntrezGene: | C7orf10 |
HGNC: | 16001 |
UniProt: | Q9HAC7Q4KMW8B7Z568 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.11e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.49e-13 | 160 |
entire embryonic mesenchyme | 2.49e-13 | 160 |
structure with developmental contribution from neural crest | 9.53e-10 | 132 |
cell layer | 1.17e-09 | 309 |
epithelium | 2.24e-09 | 306 |
dense mesenchyme tissue | 3.07e-09 | 73 |
ectoderm-derived structure | 3.49e-09 | 171 |
ectoderm | 3.49e-09 | 171 |
presumptive ectoderm | 3.49e-09 | 171 |
somite | 4.46e-09 | 71 |
presomitic mesoderm | 4.46e-09 | 71 |
presumptive segmental plate | 4.46e-09 | 71 |
dermomyotome | 4.46e-09 | 71 |
trunk paraxial mesoderm | 4.46e-09 | 71 |
paraxial mesoderm | 5.17e-09 | 72 |
presumptive paraxial mesoderm | 5.17e-09 | 72 |
trunk mesenchyme | 2.21e-08 | 122 |
muscle tissue | 3.64e-08 | 64 |
musculature | 3.64e-08 | 64 |
musculature of body | 3.64e-08 | 64 |
epithelial vesicle | 4.29e-08 | 78 |
surface structure | 9.69e-08 | 99 |
skeletal muscle tissue | 1.47e-07 | 62 |
striated muscle tissue | 1.47e-07 | 62 |
myotome | 1.47e-07 | 62 |
multilaminar epithelium | 1.55e-07 | 83 |
trunk | 2.19e-07 | 199 |
head | 3.30e-07 | 56 |