FFCP PHASE1:Hg19::chr7:39989788..39989876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8621 | |EntrezGene=8621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1733 | |HGNC=1733 | ||
|TSSclassifier=strong | |||
|UniProt=Q14004,Q9BVE2 | |UniProt=Q14004,Q9BVE2 | ||
|association_with_transcript=-82bp_to_NM_003718,NM_031267,uc003thh.3,uc003thi.3_5end | |association_with_transcript=-82bp_to_NM_003718,NM_031267,uc003thh.3,uc003thi.3_5end | ||
|cluster_id=chr7:39989788..39989876,+ | |||
|coexpression_cluster_id=C443 | |||
|description=CAGE_peak_1_at_CDK13_5end | |description=CAGE_peak_1_at_CDK13_5end | ||
|id=chr7:39989788..39989876,+ | |id=chr7:39989788..39989876,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.44e-45!140;CL:0000037!9.26e-45!172;CL:0000566!9.26e-45!172;CL:0000988!5.03e-41!182;CL:0002032!1.39e-40!165;CL:0000837!1.39e-40!165;CL:0002087!3.56e-36!119;CL:0002031!2.72e-35!124;CL:0000838!1.31e-20!52;CL:0000542!2.80e-20!53;CL:0000051!2.80e-20!53;CL:0000763!7.96e-20!112;CL:0000049!7.96e-20!112;CL:0000766!3.09e-19!76;CL:0000557!1.55e-16!71;CL:0002009!4.03e-15!65;CL:0002057!4.73e-15!42;CL:0002194!2.80e-14!63;CL:0000576!2.80e-14!63;CL:0000040!2.80e-14!63;CL:0000559!2.80e-14!63;CL:0000839!3.49e-14!70;CL:0000860!1.27e-13!45;CL:0000084!1.80e-12!25;CL:0000827!1.80e-12!25;CL:0000791!4.12e-12!18;CL:0000789!4.12e-12!18;CL:0002420!4.12e-12!18;CL:0002419!4.12e-12!18;CL:0000790!4.12e-12!18;CL:0000236!5.35e-08!14;CL:0000625!7.26e-08!11;CL:0000945!8.12e-08!24;CL:0000826!8.12e-08!24 | |ontology_enrichment_celltype=CL:0000738!2.44e-45!140;CL:0000037!9.26e-45!172;CL:0000566!9.26e-45!172;CL:0000988!5.03e-41!182;CL:0002032!1.39e-40!165;CL:0000837!1.39e-40!165;CL:0002087!3.56e-36!119;CL:0002031!2.72e-35!124;CL:0000838!1.31e-20!52;CL:0000542!2.80e-20!53;CL:0000051!2.80e-20!53;CL:0000763!7.96e-20!112;CL:0000049!7.96e-20!112;CL:0000766!3.09e-19!76;CL:0000557!1.55e-16!71;CL:0002009!4.03e-15!65;CL:0002057!4.73e-15!42;CL:0002194!2.80e-14!63;CL:0000576!2.80e-14!63;CL:0000040!2.80e-14!63;CL:0000559!2.80e-14!63;CL:0000839!3.49e-14!70;CL:0000860!1.27e-13!45;CL:0000084!1.80e-12!25;CL:0000827!1.80e-12!25;CL:0000791!4.12e-12!18;CL:0000789!4.12e-12!18;CL:0002420!4.12e-12!18;CL:0002419!4.12e-12!18;CL:0000790!4.12e-12!18;CL:0000236!5.35e-08!14;CL:0000625!7.26e-08!11;CL:0000945!8.12e-08!24;CL:0000826!8.12e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;9.81e-13;53!CL:0000084;1.45e-12;25!CL:0000791;2.86e-12;18!CL:0000789;2.86e-12;18!CL:0002419;2.86e-12;18!CL:0002087;2.09e-11;104!CL:0000576;6.10e-11;48!CL:0000860;2.54e-10;33!CL:0002057;2.54e-10;33!CL:0000738;3.03e-10;136!CL:0000766;8.55e-10;69!CL:0000473;9.06e-09;39!CL:0000234;9.06e-09;39!CL:0000236;4.68e-08;13!CL:0000625;5.91e-08;11!CL:0000945;7.01e-08;24!CL:0000763;3.53e-07;100!CL:0000988;3.71e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.00e-47,136;CL:0000037,9.12e-47,168;CL:0000988,1.98e-43,177;CL:0002032,1.62e-42,161;CL:0000837,1.62e-42,161;CL:0002087,1.88e-38,115;CL:0002031,1.79e-37,120;CL:0000763,2.31e-21,108;CL:0000049,2.31e-21,108;CL:0000766,2.95e-21,72;CL:0000838,1.30e-20,52;CL:0000542,2.78e-20,53;CL:0000051,2.78e-20,53;CL:0000557,1.98e-18,67;CL:0002009,5.37e-17,61;CL:0002194,4.07e-16,59;CL:0000576,4.07e-16,59;CL:0000040,4.07e-16,59;CL:0000559,4.07e-16,59;CL:0000839,6.97e-16,66;CL:0000860,4.71e-15,42;CL:0002057,4.71e-15,42;CL:0000473,9.29e-15,48;CL:0000234,9.29e-15,48;CL:0000084,1.79e-12,25;CL:0000827,1.79e-12,25;CL:0000791,4.11e-12,18;CL:0000789,4.11e-12,18;CL:0002420,4.11e-12,18;CL:0002419,4.11e-12,18;CL:0000790,4.11e-12,18;CL:0000236,5.34e-08,14;CL:0000625,7.25e-08,11;CL:0000945,8.10e-08,24;CL:0000826,8.10e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;9.81e-13;53!CL:0000790;2.86e-12;18!CL:0002057;2.59e-11;42!CL:0000049;4.34e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-21!102;UBERON:0003061!1.72e-21!102;UBERON:0002193!2.00e-17!112;UBERON:0002371!5.98e-14!80;UBERON:0001474!1.85e-13!86;UBERON:0004765!1.35e-09!101;UBERON:0001434!1.35e-09!101;UBERON:0002405!1.24e-08!115;UBERON:0000178!7.01e-07!15;UBERON:0000179!7.01e-07!15;UBERON:0000463!7.01e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.72e-21!102;UBERON:0003061!1.72e-21!102;UBERON:0002193!2.00e-17!112;UBERON:0002371!5.98e-14!80;UBERON:0001474!1.85e-13!86;UBERON:0004765!1.35e-09!101;UBERON:0001434!1.35e-09!101;UBERON:0002405!1.24e-08!115;UBERON:0000178!7.01e-07!15;UBERON:0000179!7.01e-07!15;UBERON:0000463!7.01e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.12e-07;15!UBERON:0000179;6.12e-07;15!UBERON:0000463;6.12e-07;15 | |||
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| ||
|short_description=p1@CDK13 | |short_description=p1@CDK13 | ||
}} | }} |
Latest revision as of 13:39, 18 September 2015
Short description: | p1@CDK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDK13_5end |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | -82bp_to_NM_003718, NM_031267, uc003thh.3, uc003thi.3_5end |
EntrezGene: | CDK13 |
HGNC: | 1733 |
UniProt: | Q14004Q9BVE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.21e-23 | 98 |
blood island | 3.21e-23 | 98 |
hemolymphoid system | 9.59e-19 | 108 |
bone marrow | 1.90e-15 | 76 |
bone element | 7.72e-15 | 82 |
immune system | 1.20e-13 | 93 |
skeletal element | 2.43e-11 | 90 |
skeletal system | 1.60e-09 | 100 |
blood | 7.00e-07 | 15 |
haemolymphatic fluid | 7.00e-07 | 15 |
organism substance | 7.00e-07 | 15 |