FFCP PHASE1:Hg19::chr15:74287009..74287018,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:74287009..74287018,+
|short_description=p3@PML
|description=CAGE_peak_3_at_PML_5end
|association_with_transcript=0bp_to_ENST00000359928,ENST00000395135,EN...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5371 | |EntrezGene=5371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9113 | |HGNC=9113 | ||
|TSSclassifier=strong | |||
|UniProt=P29590,E9PBR7,Q59H09 | |UniProt=P29590,E9PBR7,Q59H09 | ||
|association_with_transcript=0bp_to_ENST00000359928,ENST00000395135,ENST00000435786,ENST00000436891,NM_002675,NM_033238,NM_033239,NM_033240,NM_033244,NM_033246,NM_033247,NM_033249,NM_033250,uc002awj.1,uc002awk.2,uc002awl.2,uc002awm.2,uc002awn.2,uc002awo.2,uc002awp.2,uc002awq.2,uc002awr.2,uc002aws.2,uc002awt.2,uc002awu.2,uc002awv.2_5end | |||
|cluster_id=chr15:74287009..74287018,+ | |||
|description=CAGE_peak_3_at_PML_5end | |||
|id=chr15:74287009..74287018,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.72e-08;17!CL:0002518;4.72e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.03e-07,17;CL:0002518,1.03e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.22e-08!365;UBERON:0002346!2.19e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,5.14e-08,104;UBERON:0002346,1.88e-07,86 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0,2.53299878168311,0,0.522371256399677,0.245733936501509,1.39560233594486,0.436882744260345,0.263766978228454,0.247532705920093,1.98838425436749,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,1.23121058076788,2.44800829493104,0.940364164434263,0.286235987131057,0.136874425072884,0.125542639594803,1.06978768047132,0.821005894499457,0.550975469195755,0,0,0.309632246632152,0.919421224478927,1.204823675113,0.739508020333575,0.232401601740905,0.568676929949686,0,0.553995408531877,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,1.27867425159808,0.329851300186716,0.398927315243264,0.426224750532694,0.580418477257168,0,0,1.25624332628372,0,0.868755378820466,1.21079900526674,0,0.316462387440884,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,1.12101712596307,0.263384084775077,1.180258620683,0.786021525498329,0.205601498999509,0.167186495390678,0.651844533267181,0.473447805734733,0,0.334231370655521,0.589211814949674,0.221533894583621,0.541607727530031,0.640456598628376,0.260118695119756,0.164437904603676,0.276350017785848,0,1.18629250529648,0.802622484269139,2.09071047609954,0.339928028092699,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0.602300476311091,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0.670700859703636,0.383587685530591,0,0.50133791063589,0.144846518960824,0.795285947051099,1.45990461090791,0.567208902984407,0.221729397462564,0.614843499851882,0.458426764241994,2.5500670180478,0,0,0,0.664789802594326,0.715471872916026,0,0,0.596287222100115,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.976248230192678,0.367663080345869,1.62028389576352,0.17859945656816,0.673588117878509,0.900891843866578,0,0,0.183201743930407,0,0,2.18047026071267,0.496971951695318,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0.653847612453835,0.454072282934794,0.576175924479999,1.17160715916898,0,0.570471821544449,0.747243402759005,0.822041490506354,0.161872944368132,0.702254033511242,0,0.491337269247072,0.826606249406124,0,0.247266929278557,5.46096817162816,1.43723628363248,0.673344455816265,0.375355559615893,0.554128230968366,0.438977620880838,0.919463387397059,0.751190294532984,0,0.717558542755448,0.640672166455702,0.635795703478686,0.600182192168805,0.206105058476878,0.515281080091258,0.37223371266318,0,0.68205903612839,0.504867548488229,0.368199594569197,0.969876340912871,0.710019185033229,0.201504196455281,0,1.35282597214308,0.818238361772504,0.860413786167011,0.487894824518382,0.397589304964456,0.232387885739037,0.310983165046111,0.504641701751257,0,1.56449532329816,1.92972281457866,1.38134921352481,0.928735856063958,2.16563844500876,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0.738155454624648,1.40241773803446,0.4115740113314,0,1.26755034821831,0,0.590789906681404,2.20731549707325,0.245976877086227,1.54411029268673,1.09750285408626,1.1240175325762,0.402115889646523,0.648119116109707,0.325808305310325,1.03993478527958,0,1.27523445472584,0.821860859650752,1.01056513432752,0.925971025153221,1.52203321787679,2.37061319387782,0,0.492434012174795,0.468008530278475,0.297262324577456,0.93733833986777,1.34385702559088,1.41775097242386,0.358234090811393,0.871901815541886,1.15014803749563,0,0.088048434013226,0.621984346622316,1.00883967391873,0.37872730027914,0.190493682876507,0,0,0,0,0.600686115687835,0,0.672786506072164,1.74384027533312,0.2933531432838,0.258543431515556,10.7296933755565,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.799266537048298,0,2.17048642156577,0.823240336780769,0.325736184293735,1.42156779497018,0,0,0,0.299918973546171,0,0,0,0,2.29723871668228,2.85273810081437,0.289562613335158,0.821905290201534,0.358121926479791,0.336255431980582,0,0.646882724578552,0.128343036279748,0.508189248444927,3.90419561572865,0.773288812777695,1.34013012267479,0.637938751653163,0,0,0,1.34960640891054,1.50051156317903,0.813795071099207,1.45579603071565,0.178428988797162,0.315404830067869,0.937131319941706,0.300946099727719,0,0,1.32845119707087,0.553107505625109,0.434418072340414,1.95801157462741,0.686286847621712,0.206768026122887,0.215714200818617,0.426910231213777,0.303127571446259,0,0.30239029332968,0.496215615637554,0.767309866440312,0.841980283299221,0.384417447767103,0.511707249066704,0.482561763430822,0,1.07946785661859,0.355123450626254,0.821271560138091,1.03850885836724,0.232420756919918,0.120859449591622,0.601519410909855,0.460404944679482,0.114814448164607,0.728364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| ||
|short_description=p3@PML | |||
}} | }} |
Latest revision as of 00:14, 19 September 2015
Short description: | p3@PML |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PML_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359928, ENST00000395135, ENST00000435786, ENST00000436891, NM_002675, NM_033238, NM_033239, NM_033240, NM_033244, NM_033246, NM_033247, NM_033249, NM_033250, uc002awj.1, uc002awk.2, uc002awl.2, uc002awm.2, uc002awn.2, uc002awo.2, uc002awp.2, uc002awq.2, uc002awr.2, uc002aws.2, uc002awt.2, uc002awu.2, uc002awv.2_5end |
EntrezGene: | PML |
HGNC: | 9113 |
UniProt: | P29590E9PBR7Q59H09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.03e-07 | 17 |
kidney epithelial cell | 1.03e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 5.14e-08 | 104 |
neurectoderm | 1.88e-07 | 86 |