FFCP PHASE1:Hg19::chr7:137570475..137570486,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:137570475..137570486,- | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_at_chr7:137570475..137570486,- | |description=CAGE_peak_at_chr7:137570475..137570486,- | ||
|id=chr7:137570475..137570486,- | |id=chr7:137570475..137570486,- | ||
|ontology_enrichment_celltype=CL:0002166!1.18e-16!3;CL:0002621!4.02e-16!3;CL:0002159!6.44e-14!13;CL:0000244!1.36e-12!4;CL:0000731!1.36e-12!4;CL:0000317!2.73e-11!2;CL:1000448!2.73e-11!2;CL:0002308!2.73e-11!2;CL:0002140!2.73e-11!2;CL:0002076!1.04e-09!43;CL:0000223!4.91e-08!59;CL:0002251!5.47e-08!21 | |ontology_enrichment_celltype=CL:0002166!1.18e-16!3;CL:0002621!4.02e-16!3;CL:0002159!6.44e-14!13;CL:0000244!1.36e-12!4;CL:0000731!1.36e-12!4;CL:0000317!2.73e-11!2;CL:1000448!2.73e-11!2;CL:0002308!2.73e-11!2;CL:0002140!2.73e-11!2;CL:0002076!1.04e-09!43;CL:0000223!4.91e-08!59;CL:0002251!5.47e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002166;9.54e-47;3!CL:0000244;2.65e-35;4!CL:0000731;2.65e-35;4!CL:0002621;2.53e-21;3!CL:0002159;7.16e-18;14!CL:0000317;6.93e-09;2!CL:1000448;6.93e-09;2!CL:0002308;6.93e-09;2!CL:0002140;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,6.47e-47,3;CL:0000244,2.36e-35,4;CL:0000731,2.36e-35,4;CL:0002621,3.28e-21,3;CL:0002159,5.89e-18,14;CL:0000317,5.94e-09,2;CL:1000448,5.94e-09,2;CL:0002308,5.94e-09,2;CL:0002140,5.94e-09,2;CL:0002077,1.47e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!4.02e-16!3;UBERON:0001708!1.31e-12!4;UBERON:0001704!1.31e-12!4;UBERON:0002419!2.73e-11!2;UBERON:0007771!2.73e-11!2;UBERON:0003297!2.73e-11!2;UBERON:0001821!2.73e-11!2;UBERON:0003487!2.73e-11!2;UBERON:0001820!2.73e-11!2;UBERON:0005089!2.73e-11!2;UBERON:0005088!2.73e-11!2;UBERON:0000365!3.67e-10!5;UBERON:0003729!2.99e-09!5;UBERON:0002090!1.51e-08!6;UBERON:0005910!1.55e-08!6;UBERON:0001896!2.59e-07!3;UBERON:0005290!2.59e-07!3;UBERON:0010096!2.59e-07!3 | |ontology_enrichment_uberon=UBERON:0001949!4.02e-16!3;UBERON:0001708!1.31e-12!4;UBERON:0001704!1.31e-12!4;UBERON:0002419!2.73e-11!2;UBERON:0007771!2.73e-11!2;UBERON:0003297!2.73e-11!2;UBERON:0001821!2.73e-11!2;UBERON:0003487!2.73e-11!2;UBERON:0001820!2.73e-11!2;UBERON:0005089!2.73e-11!2;UBERON:0005088!2.73e-11!2;UBERON:0000365!3.67e-10!5;UBERON:0003729!2.99e-09!5;UBERON:0002090!1.51e-08!6;UBERON:0005910!1.55e-08!6;UBERON:0001896!2.59e-07!3;UBERON:0005290!2.59e-07!3;UBERON:0010096!2.59e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.81e-35;4!UBERON:0008895;2.81e-35;4!UBERON:0000486;5.50e-32;12!UBERON:0000365;2.10e-28;5!UBERON:0011159;2.20e-28;5!UBERON:0005910;8.45e-24;6!UBERON:0001949;2.53e-21;3!UBERON:0002135;1.93e-16;1!UBERON:0011137;2.77e-13;11!UBERON:0010323;2.77e-13;11!UBERON:0003929;1.06e-09;7!UBERON:0000075;2.57e-09;16!UBERON:0002419;6.93e-09;2!UBERON:0007771;6.93e-09;2!UBERON:0002133;6.93e-09;2!UBERON:0003297;6.93e-09;2!UBERON:0001821;6.93e-09;2!UBERON:0003487;6.93e-09;2!UBERON:0001820;6.93e-09;2!UBERON:0003350;1.34e-08;8!UBERON:0001828;1.34e-08;8!UBERON:0005911;2.26e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.10e-35,4;UBERON:0008895,2.10e-35,4;UBERON:0011159,1.74e-28,5;UBERON:0000365,1.91e-28,5;UBERON:0010188,7.24e-24,6;UBERON:0002539,7.24e-24,6;UBERON:0008816,7.24e-24,6;UBERON:0005910,7.83e-24,6;UBERON:0001949,3.28e-21,3;UBERON:0002135,1.93e-16,1;UBERON:0010323,2.50e-13,11;UBERON:0011137,1.33e-10,14;UBERON:0000075,2.39e-09,16;UBERON:0002419,5.94e-09,2;UBERON:0007771,5.94e-09,2;UBERON:0003297,5.94e-09,2;UBERON:0001821,5.94e-09,2;UBERON:0003487,5.94e-09,2;UBERON:0001820,5.94e-09,2;UBERON:0005089,5.94e-09,2;UBERON:0005088,5.94e-09,2;UBERON:0002133,6.94e-09,2;UBERON:0003350,1.47e-08,8;UBERON:0001828,1.47e-08,8;UBERON:0008814,2.27e-08,18;UBERON:0003102,4.17e-07,99;UBERON:0000033,7.09e-07,56 | |||
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|short_description=p@chr7:137570475..137570486,- | |short_description=p@chr7:137570475..137570486,- | ||
}} | }} |
Latest revision as of 06:28, 31 July 2015
Short description: | p@chr7:137570475..137570486, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:137570475..137570486, - |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 6.47e-47 | 3 |
transitional epithelial cell | 2.36e-35 | 4 |
urothelial cell | 2.36e-35 | 4 |
gingival epithelial cell | 3.28e-21 | 3 |
general ecto-epithelial cell | 5.89e-18 | 14 |
sebum secreting cell | 5.94e-09 | 2 |
epithelial cell of sweat gland | 5.94e-09 | 2 |
epithelial cell of skin gland | 5.94e-09 | 2 |
acinar cell of sebaceous gland | 5.94e-09 | 2 |
ecto-epithelial cell | 1.47e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.10e-35 | 4 |
splanchnocranium | 2.10e-35 | 4 |
primary subdivision of cranial skeletal system | 1.74e-28 | 5 |
urothelium | 1.91e-28 | 5 |
protuberance | 7.24e-24 | 6 |
pharyngeal arch | 7.24e-24 | 6 |
embryonic head | 7.24e-24 | 6 |
transitional epithelium | 7.83e-24 | 6 |
gingival epithelium | 3.28e-21 | 3 |
mitral valve | 1.93e-16 | 1 |
cranial skeletal system | 2.50e-13 | 11 |
axial skeletal system | 1.33e-10 | 14 |
subdivision of skeletal system | 2.39e-09 | 16 |
skin gland | 5.94e-09 | 2 |
epidermis gland | 5.94e-09 | 2 |
gland of integumental system | 5.94e-09 | 2 |
sebaceous gland | 5.94e-09 | 2 |
skin sebaceous gland | 5.94e-09 | 2 |
sweat gland | 5.94e-09 | 2 |
sweat gland placode | 5.94e-09 | 2 |
sebaceous gland placode | 5.94e-09 | 2 |
atrioventricular valve | 6.94e-09 | 2 |
epithelium of mucosa | 1.47e-08 | 8 |
gingiva | 1.47e-08 | 8 |
pharyngeal arch system | 2.27e-08 | 18 |
surface structure | 4.17e-07 | 99 |
head | 7.09e-07 | 56 |