FFCP PHASE1:Hg19::chr7:129251531..129251601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4899 | |EntrezGene=4899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7996 | |HGNC=7996 | ||
|TSSclassifier=strong | |||
|UniProt=Q16656,Q96AN2,C9JP85,B4DDV6 | |UniProt=Q16656,Q96AN2,C9JP85,B4DDV6 | ||
|association_with_transcript=0bp_to_ENST00000223190,ENST00000311967,ENST00000353868,ENST00000393232,ENST00000454688,ENST00000477428,ENST00000539636,NM_005011,uc003voz.2,uc003vpa.2,uc011kpa.1_5end | |association_with_transcript=0bp_to_ENST00000223190,ENST00000311967,ENST00000353868,ENST00000393232,ENST00000454688,ENST00000477428,ENST00000539636,NM_005011,uc003voz.2,uc003vpa.2,uc011kpa.1_5end | ||
|cluster_id=chr7:129251531..129251601,+ | |||
|description=CAGE_peak_1_at_NRF1_5end | |description=CAGE_peak_1_at_NRF1_5end | ||
|id=chr7:129251531..129251601,+ | |id=chr7:129251531..129251601,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.46e-36!172;CL:0000566!4.46e-36!172;CL:0002032!3.40e-33!165;CL:0000837!3.40e-33!165;CL:0000738!4.65e-33!140;CL:0000988!4.73e-33!182;CL:0002031!5.03e-29!124;CL:0002087!8.24e-27!119;CL:0000838!9.43e-20!52;CL:0000542!1.54e-19!53;CL:0000051!1.54e-19!53;CL:0002057!5.69e-16!42;CL:0000860!1.34e-15!45;CL:0000763!1.45e-14!112;CL:0000049!1.45e-14!112;CL:0000084!4.00e-12!25;CL:0000827!4.00e-12!25;CL:0000791!8.68e-12!18;CL:0000789!8.68e-12!18;CL:0002420!8.68e-12!18;CL:0002419!8.68e-12!18;CL:0000790!8.68e-12!18;CL:0000766!3.25e-11!76;CL:0000557!2.57e-10!71;CL:0000839!6.88e-10!70;CL:0002009!8.87e-09!65;CL:0000236!4.99e-08!14;CL:0002194!5.74e-08!63;CL:0000576!5.74e-08!63;CL:0000040!5.74e-08!63;CL:0000559!5.74e-08!63;CL:0000625!7.31e-08!11;CL:0000945!1.48e-07!24;CL:0000826!1.48e-07!24 | |ontology_enrichment_celltype=CL:0000037!4.46e-36!172;CL:0000566!4.46e-36!172;CL:0002032!3.40e-33!165;CL:0000837!3.40e-33!165;CL:0000738!4.65e-33!140;CL:0000988!4.73e-33!182;CL:0002031!5.03e-29!124;CL:0002087!8.24e-27!119;CL:0000838!9.43e-20!52;CL:0000542!1.54e-19!53;CL:0000051!1.54e-19!53;CL:0002057!5.69e-16!42;CL:0000860!1.34e-15!45;CL:0000763!1.45e-14!112;CL:0000049!1.45e-14!112;CL:0000084!4.00e-12!25;CL:0000827!4.00e-12!25;CL:0000791!8.68e-12!18;CL:0000789!8.68e-12!18;CL:0002420!8.68e-12!18;CL:0002419!8.68e-12!18;CL:0000790!8.68e-12!18;CL:0000766!3.25e-11!76;CL:0000557!2.57e-10!71;CL:0000839!6.88e-10!70;CL:0002009!8.87e-09!65;CL:0000236!4.99e-08!14;CL:0002194!5.74e-08!63;CL:0000576!5.74e-08!63;CL:0000040!5.74e-08!63;CL:0000559!5.74e-08!63;CL:0000625!7.31e-08!11;CL:0000945!1.48e-07!24;CL:0000826!1.48e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.06e-12;53!CL:0000084;2.66e-12;25!CL:0000860;5.00e-12;33!CL:0002057;5.00e-12;33!CL:0000791;6.83e-12;18!CL:0000789;6.83e-12;18!CL:0002419;6.83e-12;18!CL:0002087;1.20e-10;104!CL:0000576;2.69e-09;48!CL:0000236;3.43e-08;13!CL:0000738;6.01e-08;136!CL:0000625;6.72e-08;11!CL:0000945;1.29e-07;24!CL:0000473;2.49e-07;39!CL:0000234;2.49e-07;39!CL:0000766;3.20e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.09e-36,168;CL:0000988,7.02e-34,177;CL:0000738,8.55e-34,136;CL:0002032,8.68e-34,161;CL:0000837,8.68e-34,161;CL:0002031,9.01e-30,120;CL:0002087,1.56e-27,115;CL:0000838,9.43e-20,52;CL:0000542,1.54e-19,53;CL:0000051,1.54e-19,53;CL:0000860,5.69e-16,42;CL:0002057,5.69e-16,42;CL:0000763,5.80e-15,108;CL:0000049,5.80e-15,108;CL:0000473,3.27e-12,48;CL:0000234,3.27e-12,48;CL:0000084,4.00e-12,25;CL:0000827,4.00e-12,25;CL:0000791,8.68e-12,18;CL:0000789,8.68e-12,18;CL:0002420,8.68e-12,18;CL:0002419,8.68e-12,18;CL:0000790,8.68e-12,18;CL:0000766,1.11e-11,72;CL:0000557,8.93e-11,67;CL:0000839,2.47e-10,66;CL:0002009,3.38e-09,61;CL:0002194,2.36e-08,59;CL:0000576,2.36e-08,59;CL:0000040,2.36e-08,59;CL:0000559,2.36e-08,59;CL:0000236,4.99e-08,14;CL:0000625,7.31e-08,11;CL:0000945,1.48e-07,24;CL:0000826,1.48e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;2.06e-12;53!CL:0000790;6.83e-12;18!CL:0002057;7.74e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.08e-14!102;UBERON:0003061!3.08e-14!102;UBERON:0002193!2.52e-12!112;UBERON:0007023!3.88e-10!115;UBERON:0002371!1.01e-08!80;UBERON:0001474!6.67e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!3.08e-14!102;UBERON:0003061!3.08e-14!102;UBERON:0002193!2.52e-12!112;UBERON:0007023!3.88e-10!115;UBERON:0002371!1.01e-08!80;UBERON:0001474!6.67e-08!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.13e-14,98;UBERON:0003061,1.13e-14,98;UBERON:0002193,1.18e-12,108;UBERON:0007023,4.13e-10,114;UBERON:0002371,4.75e-09,76;UBERON:0002405,4.80e-09,93;UBERON:0001474,3.61e-08,82 | |||
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| ||
|short_description=p1@NRF1 | |short_description=p1@NRF1 | ||
}} | }} |
Latest revision as of 05:47, 16 September 2015
Short description: | p1@NRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000223190, ENST00000311967, ENST00000353868, ENST00000393232, ENST00000454688, ENST00000477428, ENST00000539636, NM_005011, uc003voz.2, uc003vpa.2, uc011kpa.1_5end |
EntrezGene: | NRF1 |
HGNC: | 7996 |
UniProt: | Q16656Q96AN2C9JP85B4DDV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.13e-14 | 98 |
blood island | 1.13e-14 | 98 |
hemolymphoid system | 1.18e-12 | 108 |
adult organism | 4.13e-10 | 114 |
bone marrow | 4.75e-09 | 76 |
immune system | 4.80e-09 | 93 |
bone element | 3.61e-08 | 82 |