FFCP PHASE1:Hg19::chr7:129133189..129133195,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:129133189..129133195,+ | |||
|coexpression_cluster_id=C1389 | |||
|description=CAGE_peak_at_chr7:129133189..129133195,+ | |description=CAGE_peak_at_chr7:129133189..129133195,+ | ||
|id=chr7:129133189..129133195,+ | |id=chr7:129133189..129133195,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.36e-27!140;CL:0002031!7.16e-24!124;CL:0000037!3.14e-23!172;CL:0000566!3.14e-23!172;CL:0002032!1.02e-21!165;CL:0000837!1.02e-21!165;CL:0000988!5.86e-21!182;CL:0002087!4.76e-20!119;CL:0000134!2.30e-17!358;CL:0002320!3.42e-17!365;CL:0000838!5.15e-15!52;CL:0000542!1.37e-14!53;CL:0000051!1.37e-14!53;CL:0000219!8.47e-14!390;CL:0000034!1.06e-11!444;CL:0002393!3.84e-11!9;CL:0002397!3.84e-11!9;CL:0000048!4.90e-11!430;CL:0002057!1.00e-10!42;CL:0000723!1.43e-10!436;CL:0000557!4.01e-10!71;CL:0000766!6.75e-10!76;CL:0000860!1.18e-09!45;CL:0000236!4.05e-09!14;CL:0000763!5.70e-09!112;CL:0000049!5.70e-09!112;CL:0002009!2.03e-08!65;CL:0000839!2.83e-08!70;CL:0000624!3.47e-08!6;CL:0000791!6.46e-07!18;CL:0000789!6.46e-07!18;CL:0002420!6.46e-07!18;CL:0002419!6.46e-07!18;CL:0000790!6.46e-07!18;CL:0002194!6.92e-07!63;CL:0000576!6.92e-07!63;CL:0000040!6.92e-07!63;CL:0000559!6.92e-07!63 | |ontology_enrichment_celltype=CL:0000738!1.36e-27!140;CL:0002031!7.16e-24!124;CL:0000037!3.14e-23!172;CL:0000566!3.14e-23!172;CL:0002032!1.02e-21!165;CL:0000837!1.02e-21!165;CL:0000988!5.86e-21!182;CL:0002087!4.76e-20!119;CL:0000134!2.30e-17!358;CL:0002320!3.42e-17!365;CL:0000838!5.15e-15!52;CL:0000542!1.37e-14!53;CL:0000051!1.37e-14!53;CL:0000219!8.47e-14!390;CL:0000034!1.06e-11!444;CL:0002393!3.84e-11!9;CL:0002397!3.84e-11!9;CL:0000048!4.90e-11!430;CL:0002057!1.00e-10!42;CL:0000723!1.43e-10!436;CL:0000557!4.01e-10!71;CL:0000766!6.75e-10!76;CL:0000860!1.18e-09!45;CL:0000236!4.05e-09!14;CL:0000763!5.70e-09!112;CL:0000049!5.70e-09!112;CL:0002009!2.03e-08!65;CL:0000839!2.83e-08!70;CL:0000624!3.47e-08!6;CL:0000791!6.46e-07!18;CL:0000789!6.46e-07!18;CL:0002420!6.46e-07!18;CL:0002419!6.46e-07!18;CL:0000790!6.46e-07!18;CL:0002194!6.92e-07!63;CL:0000576!6.92e-07!63;CL:0000040!6.92e-07!63;CL:0000559!6.92e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.86e-15;3!CL:0000624;5.85e-14;6!CL:0001014;6.26e-12;2!CL:0001016;6.26e-12;2!CL:0000097;6.34e-10;5!CL:0000791;1.08e-09;18!CL:0000789;1.08e-09;18!CL:0002419;1.08e-09;18!CL:0000084;4.60e-09;25!CL:0000542;8.28e-09;53!CL:0000840;2.01e-08;5!CL:0000767;5.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.91e-21,136;CL:0002031,6.33e-21,120;CL:0000037,1.02e-17,168;CL:0002032,3.26e-17,161;CL:0000837,3.26e-17,161;CL:0000988,1.65e-16,177;CL:0000838,2.53e-16,52;CL:0000542,5.86e-16,53;CL:0000051,5.86e-16,53;CL:0000623,9.46e-16,3;CL:0000825,9.46e-16,3;CL:0000624,5.87e-14,6;CL:0002087,4.85e-13,115;CL:0001014,5.94e-12,2;CL:0001016,5.94e-12,2;CL:0000097,6.74e-10,5;CL:0002028,6.74e-10,5;CL:0000791,1.07e-09,18;CL:0000789,1.07e-09,18;CL:0002420,1.07e-09,18;CL:0002419,1.07e-09,18;CL:0000790,1.07e-09,18;CL:0000084,4.15e-09,25;CL:0000827,4.15e-09,25;CL:0000840,1.94e-08,5;CL:0001029,1.94e-08,5;CL:0000767,4.99e-08,3;CL:0000134,5.11e-08,354;CL:0002320,9.84e-08,361;CL:0000557,5.34e-07,67;CL:0000219,9.85e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;1.08e-09;18!CL:0000051;8.28e-09;53 | |||
|ontology_enrichment_disease=DOID:2394!5.80e-13!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.42e-17!375;UBERON:0002371!7.19e-11!80;UBERON:0001474!2.33e-10!86;UBERON:0002390!2.48e-08!102;UBERON:0003061!2.48e-08!102;UBERON:0004765!1.15e-07!101;UBERON:0001434!1.15e-07!101;UBERON:0002193!6.69e-07!112 | |ontology_enrichment_uberon=UBERON:0002384!2.42e-17!375;UBERON:0002371!7.19e-11!80;UBERON:0001474!2.33e-10!86;UBERON:0002390!2.48e-08!102;UBERON:0003061!2.48e-08!102;UBERON:0004765!1.15e-07!101;UBERON:0001434!1.15e-07!101;UBERON:0002193!6.69e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-08,76;UBERON:0001474,1.28e-07,82;UBERON:0002384,2.40e-07,371;UBERON:0004765,9.98e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,2.68680578668049,8.20525453575203,0,0,0,0.0774672005803016,0.426507697462265,1.17440175733939,2.76997704265939,0.802177789880567,6.07630438004385,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,1.41889337933151,0.344745680736619,0,0,0,0,0.449446968890169,0,0,0,0,0.398927315243264,0,0,0,0,0.502497330513487,2.08593167368081,1.08594422352558,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.838634582033504,0.112328631146495,0.901061357049038,0,0.285012743741249,0.39783335439818,0,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,6.26134266020393,20.5533016279829,12.9972897562578,5.28685314316103,2.80254281490768,0.263384084775077,4.52432471261816,2.35806457649499,3.28962398399215,0,0,0,0,2.33961959458865,1.17842362989935,1.32920336750173,0.541607727530031,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.593146252648242,1.07016331235885,1.04535523804977,0,0.766440987203842,1.03088233644789,1.26509846009751,0,0,0,0.451725357233318,0,0,0,0,1.20964045934839,0.534880391567015,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48793738648926,3.17063897517315,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.2937654491571,2.82354679815446,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,1.48323486804084,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52424285499351,23.9878605912964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0.189403005275089,1.0062716070103,0,0,0.453692771289717,0.15543720058278,0.443565449968902,0.955780602982214,0.449803112163605,1.08684069813382,0,0.265841714557995,1.04349012362347,2.25386413495828,0.380805212168795,0.813741466409323,0.727394636810238,0.322231671127465,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797189041880179,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,2.68680578668049,8.20525453575203,0,0,0,0.0774672005803016,0.426507697462265,1.17440175733939,2.76997704265939,0.802177789880567,6.07630438004385,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,1.41889337933151,0.344745680736619,0,0,0,0,0.449446968890169,0,0,0,0,0.398927315243264,0,0,0,0,0.502497330513487,2.08593167368081,1.08594422352558,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.838634582033504,0.112328631146495,0.901061357049038,0,0.285012743741249,0.39783335439818,0,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,6.26134266020393,20.5533016279829,12.9972897562578,5.28685314316103,2.80254281490768,0.263384084775077,4.52432471261816,2.35806457649499,3.28962398399215,0,0,0,0,2.33961959458865,1.17842362989935,1.32920336750173,0.541607727530031,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.593146252648242,1.07016331235885,1.04535523804977,0,0.766440987203842,1.03088233644789,1.26509846009751,0,0,0,0.451725357233318,0,0,0,0,1.20964045934839,0.534880391567015,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48793738648926,3.17063897517315,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.2937654491571,2.82354679815446,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,1.48323486804084,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52424285499351,23.9878605912964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0.189403005275089,1.0062716070103,0,0,0.453692771289717,0.15543720058278,0.443565449968902,0.955780602982214,0.449803112163605,1.08684069813382,0,0.265841714557995,1.04349012362347,2.25386413495828,0.380805212168795,0.813741466409323,0.727394636810238,0.322231671127465,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797189041880179,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:129133189..129133195,+ | |short_description=p@chr7:129133189..129133195,+ | ||
}} | }} |
Latest revision as of 05:54, 31 July 2015
Short description: | p@chr7:129133189..129133195, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:129133189..129133195, + |
Coexpression cluster: | C1389_immature_CD19_CD14_Basophils_migratory_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-08 | 76 |
bone element | 1.28e-07 | 82 |
connective tissue | 2.40e-07 | 371 |
skeletal element | 9.98e-07 | 90 |