FFCP PHASE1:Hg19::chr7:116963334..116963345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7472 | |EntrezGene=7472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12780 | |HGNC=12780 | ||
|TSSclassifier=strong | |||
|UniProt=P09544,A4D0V1 | |UniProt=P09544,A4D0V1 | ||
|association_with_transcript=0bp_to_ENST00000265441,NM_003391,NR_024047,uc003viz.2,uc003vja.2_5end | |association_with_transcript=0bp_to_ENST00000265441,NM_003391,NR_024047,uc003viz.2,uc003vja.2_5end | ||
|cluster_id=chr7:116963334..116963345,- | |||
|coexpression_cluster_id=C4647 | |||
|description=CAGE_peak_4_at_WNT2_5end | |description=CAGE_peak_4_at_WNT2_5end | ||
|id=chr7:116963334..116963345,- | |id=chr7:116963334..116963345,- | ||
|ontology_enrichment_celltype=CL:0002537!9.18e-13!5;CL:0002541!2.53e-08!3 | |ontology_enrichment_celltype=CL:0002537!9.18e-13!5;CL:0002541!2.53e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.71e-31;5!CL:0002541;7.93e-29;3!CL:0000349;4.40e-24;19!CL:0002552;1.72e-08;5!CL:0000134;1.51e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.08e-31,5;CL:0002541,3.20e-29,3;CL:0000349,4.12e-24,19;CL:0002552,2.08e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.57e-11;1!UBERON:0003124;8.61e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.64e-23!14;UBERON:0000158!7.64e-23!14;UBERON:0000478!2.14e-22!24;UBERON:0000305!2.92e-12!7;UBERON:0003124!3.09e-12!7;UBERON:0004923!5.68e-11!57;UBERON:0004871!1.31e-10!8;UBERON:0000476!2.53e-08!3;UBERON:0000920!2.53e-08!3 | |ontology_enrichment_uberon=UBERON:0005631!7.64e-23!14;UBERON:0000158!7.64e-23!14;UBERON:0000478!2.14e-22!24;UBERON:0000305!2.92e-12!7;UBERON:0003124!3.09e-12!7;UBERON:0004923!5.68e-11!57;UBERON:0004871!1.31e-10!8;UBERON:0000476!2.53e-08!3;UBERON:0000920!2.53e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.09e-46;24!UBERON:0005631;2.87e-46;10!UBERON:0000158;2.87e-46;10!UBERON:0003124;7.93e-29;3!UBERON:0000920;7.93e-29;3!UBERON:0000305;1.36e-22;7!UBERON:0002171;8.61e-11;1!UBERON:0006518;8.61e-11;1!UBERON:0008949;8.61e-11;1!UBERON:0000101;8.61e-11;1!UBERON:0002167;8.61e-11;1!UBERON:0002331;3.55e-09;10!UBERON:0004923;1.19e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,1.19e-46,24;UBERON:0005631,7.78e-43,14;UBERON:0000158,7.78e-43,14;UBERON:0000920,3.20e-29,3;UBERON:0000305,2.07e-22,7;UBERON:0003124,4.69e-22,7;UBERON:0004871,1.20e-19,8;UBERON:0004923,8.10e-19,66;UBERON:0002171,5.05e-11,1;UBERON:0006518,5.05e-11,1;UBERON:0008949,5.05e-11,1;UBERON:0000101,5.05e-11,1;UBERON:0002167,5.05e-11,1;UBERON:0002331,2.80e-09,10;UBERON:0000358,2.80e-09,10;UBERON:0000307,2.80e-09,10;UBERON:0000091,2.80e-09,10;UBERON:0000087,2.80e-09,10;UBERON:0007010,2.80e-09,10;UBERON:0007806,2.80e-09,10;UBERON:0008780,2.80e-09,10;UBERON:0005728,2.80e-09,10 | |||
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| ||
|short_description=p4@WNT2 | |short_description=p4@WNT2 | ||
}} | }} |
Latest revision as of 19:39, 15 September 2015
Short description: | p4@WNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WNT2_5end |
Coexpression cluster: | C4647_amniotic_Fibroblast_cord_Mesenchymal_Placental_tenocyte_lung |
Association with transcript: | 0bp_to_ENST00000265441, NM_003391, NR_024047, uc003viz.2, uc003vja.2_5end |
EntrezGene: | WNT2 |
HGNC: | 12780 |
UniProt: | P09544A4D0V1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.08e-31 | 5 |
chorionic membrane mesenchymal stem cell | 3.20e-29 | 3 |
extraembryonic cell | 4.12e-24 | 19 |
fibroblast of gingiva | 2.08e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 1.19e-46 | 24 |
extraembryonic membrane | 7.78e-43 | 14 |
membranous layer | 7.78e-43 | 14 |
egg chorion | 3.20e-29 | 3 |
amnion | 2.07e-22 | 7 |
chorion | 4.69e-22 | 7 |
somatic layer of lateral plate mesoderm | 1.20e-19 | 8 |
organ component layer | 8.10e-19 | 66 |
lower lobe of right lung | 5.05e-11 | 1 |
right lung lobe | 5.05e-11 | 1 |
lower lobe of lung | 5.05e-11 | 1 |
lobe of lung | 5.05e-11 | 1 |
right lung | 5.05e-11 | 1 |
umbilical cord | 2.80e-09 | 10 |
blastocyst | 2.80e-09 | 10 |
blastula | 2.80e-09 | 10 |
bilaminar disc | 2.80e-09 | 10 |
inner cell mass | 2.80e-09 | 10 |
cleaving embryo | 2.80e-09 | 10 |
connecting stalk | 2.80e-09 | 10 |
inner cell mass derived epiblast | 2.80e-09 | 10 |
extraembryonic mesoderm | 2.80e-09 | 10 |