FFCP PHASE1:Hg19::chr6:56894263..56894265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56894263..56894265,+ | |||
|description=CAGE_peak_at_chr6:56894263..56894265,+ | |description=CAGE_peak_at_chr6:56894263..56894265,+ | ||
|id=chr6:56894263..56894265,+ | |id=chr6:56894263..56894265,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.31e-12;2!CL:0002586;1.12e-08;3!CL:0002563;8.14e-07;4!CL:0000149;8.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.24e-12,2;CL:0002586,1.04e-08,3;CL:0000149,7.70e-07,4;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.48e-14!235;DOID:14566!3.51e-14!239;DOID:0050687!5.85e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.31e-12;2!DOID:3307;2.31e-12;2!DOID:5409;8.14e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.48e-12,2;DOID:1909,2.59e-12,2;DOID:5409,7.27e-07,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.12e-08;3!UBERON:0001782;1.12e-08;3!UBERON:0001052;8.14e-07;4!UBERON:0001242;8.14e-07;4!UBERON:0001262;8.14e-07;4!UBERON:0004786;8.14e-07;4!UBERON:0004808;8.14e-07;4!UBERON:0001277;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.04e-08,3;UBERON:0005424,1.04e-08,3;UBERON:0001781,7.70e-07,4;UBERON:0001052,9.63e-07,4;UBERON:0001242,9.63e-07,4;UBERON:0001262,9.63e-07,4;UBERON:0004786,9.63e-07,4;UBERON:0004808,9.63e-07,4;UBERON:0001277,9.63e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0,0.263504357079378,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0,0.379891534993739,0.132409180813219,0,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.516628905878827,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.567160915800105,0,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.276149695926898,0,0,0,0,0,0,0.286804595389004,0,0.265059536642971,0.116193942869518,0,0.756962552626885,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0.482022059766964,0,0,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.171567810298526,0.219500570817251,0,0.301586917234893,0.370353780634118,0,0,0,0.231860809950154,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0.53735113621709,0.290633938513962,0,0,0.176096868026452,0,0,0.12624243342638,0.190493682876507,0,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0,0,0.106727557803444,0,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0.355123450626254,0.410635780069046,0,0,0.604297247958111,0,0.368323955743585,0.459257792658427,0.182091168006717,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0.261435451024901,0.256450125116389,0.328014645699706,1.30151357865721,0,0.183138929636687,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.511359764496605,0.267096106940212,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.353437207037059,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.405820753925408,0,0,0.430234056612155,0.294747123039363,0.35667105148125,0.354761064070598,0.422215270595328,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0.649243880549111,0.842391534340376,0.228234679033192,0.156679895773023,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0.333698283423817,0.390776190804081,0,1.23087398947712,0,0,0,0.561421621224659,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0.703347082052564,0.222617410045812,0.494411622680279,0.211125408127993,0,0,0.755798243562828,0,0.246169610922139,0,0,0,0.511572370226872,0,0,0,0,0.371072392647405,0,0,0,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0.583209226766509,0,0,0.241192877250816,0,0,0.295547618953547,0,0.762569244632931,0.278847488557207,0,0.113942055847001,0.23056390438806,0.0897576444097721,0.434589487688032,0,0.274792780205587,0,1.02193298195737,0,0.166211681900156,0.225595660617181,0.588187602953219,0.167821586975843,0.189753732724185,0.317873157960757,0.210998064528027,0.652931232636591,0.424059214301822,1.08194319871046,0,0.0884575645033392,0,0.296521128680622,0.617819694732514,0.522109747527277,0.202203398942031,0,0,0.182454789215666,0.586993856796269,0,0,0,0.30607276163049,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0.313932918407225,0,0.853828638089378,0,0.347119476670262,0.195984794828755,0.174118413160805,0.17472666824203,0,0.483781656445426,0.146178634172371,0.656923656425674,0.0969890164884194,0,0,0.685209623233754,0,0.316553979779393,0.195551382734803,0,0.213452994739353,0,0.288180834308212,0.343609788497747,0,0.288109595976299,0.248505071130865,0,0.407712618220842,0.209205692624666,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.787831823072237,0.576911008668165,0.471824806979294,0.0984274815147488,0.931406652723629,0,0.136203406111576,0.643012593860077,0.275078873194468,0,0,0.77380195455795,0.728994679896296,0,0.236417121897595,0.104909176269996,0,0,0,0,0.662091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| ||
|short_description=p@chr6:56894263..56894265,+ | |short_description=p@chr6:56894263..56894265,+ | ||
}} | }} |
Latest revision as of 02:35, 31 July 2015
Short description: | p@chr6:56894263..56894265, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56894263..56894265, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.24e-12 | 2 |
retinal pigment epithelial cell | 1.04e-08 | 3 |
visual pigment cell | 7.70e-07 | 4 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.04e-08 | 3 |
presumptive retinal pigmented epithelium | 1.04e-08 | 3 |
layer of retina | 7.70e-07 | 4 |
rectum | 9.63e-07 | 4 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.48e-12 | 2 |
melanoma | 2.59e-12 | 2 |
lung small cell carcinoma | 7.27e-07 | 4 |