FFCP PHASE1:Hg19::chr6:52285131..52285182,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114327 | |EntrezGene=114327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16406 | |HGNC=16406 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000433625,ENST00000491749_5end | |association_with_transcript=0bp_to_ENST00000433625,ENST00000491749_5end | ||
|cluster_id=chr6:52285131..52285182,+ | |||
|description=CAGE_peak_1_at_EFHC1_5end | |description=CAGE_peak_1_at_EFHC1_5end | ||
|id=chr6:52285131..52285182,+ | |id=chr6:52285131..52285182,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.88e-15!180;CL:0002319!7.28e-08!25;CL:0000057!6.86e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.88e-15!180;CL:0002319!7.28e-08!25;CL:0000057!6.86e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002319;9.19e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.73e-08,25;CL:0000057,5.11e-07,76;CL:0000095,9.95e-07,17;CL:0000123,9.95e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.26e-10!27;DOID:0050687!1.38e-10!143;DOID:193!3.25e-10!29;DOID:305!2.93e-08!106;DOID:14566!2.92e-07!239;DOID:2394!4.01e-07!14;DOID:162!8.25e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:120;1.11e-10;27!DOID:193;3.36e-10;29!DOID:2394;4.02e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.13e-10,27;DOID:0050687,1.45e-10,143;DOID:193,2.92e-10,29;DOID:305,2.64e-08,106;DOID:2394,3.74e-07,14;DOID:14566,4.67e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.55e-11!94;UBERON:0001016!1.55e-11!94;UBERON:0000475!2.32e-11!365;UBERON:0005743!2.46e-11!86;UBERON:0000924!1.51e-10!173;UBERON:0006601!1.51e-10!173;UBERON:0004121!1.86e-10!169;UBERON:0001017!2.37e-10!82;UBERON:0000955!3.00e-09!69;UBERON:0006238!3.00e-09!69;UBERON:0002346!8.59e-09!90;UBERON:0003075!8.68e-09!86;UBERON:0007284!8.68e-09!86;UBERON:0000033!9.71e-09!123;UBERON:0000153!3.53e-08!129;UBERON:0007811!3.53e-08!129;UBERON:0000119!6.10e-08!312;UBERON:0000483!7.68e-08!309;UBERON:0003056!1.48e-07!61;UBERON:0000481!6.23e-07!347;UBERON:0000468!9.05e-07!659;UBERON:0002616!9.26e-07!59 | |ontology_enrichment_uberon=UBERON:0000073!1.55e-11!94;UBERON:0001016!1.55e-11!94;UBERON:0000475!2.32e-11!365;UBERON:0005743!2.46e-11!86;UBERON:0000924!1.51e-10!173;UBERON:0006601!1.51e-10!173;UBERON:0004121!1.86e-10!169;UBERON:0001017!2.37e-10!82;UBERON:0000955!3.00e-09!69;UBERON:0006238!3.00e-09!69;UBERON:0002346!8.59e-09!90;UBERON:0003075!8.68e-09!86;UBERON:0007284!8.68e-09!86;UBERON:0000033!9.71e-09!123;UBERON:0000153!3.53e-08!129;UBERON:0007811!3.53e-08!129;UBERON:0000119!6.10e-08!312;UBERON:0000483!7.68e-08!309;UBERON:0003056!1.48e-07!61;UBERON:0000481!6.23e-07!347;UBERON:0000468!9.05e-07!659;UBERON:0002616!9.26e-07!59 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.51e-11,89;UBERON:0001017,1.02e-10,81;UBERON:0004121,3.13e-10,171;UBERON:0000924,3.13e-10,171;UBERON:0006601,3.13e-10,171;UBERON:0010314,6.89e-10,132;UBERON:0000955,1.29e-09,68;UBERON:0006238,1.29e-09,68;UBERON:0002346,5.62e-08,86;UBERON:0003075,5.80e-08,82;UBERON:0007284,5.80e-08,82;UBERON:0003056,1.44e-07,61;UBERON:0000119,1.94e-07,309;UBERON:0000483,2.42e-07,306;UBERON:0010371,4.90e-07,104 | |||
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| ||
|short_description=p1@EFHC1 | |short_description=p1@EFHC1 | ||
}} | }} |
Latest revision as of 05:59, 19 September 2015
Short description: | p1@EFHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFHC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433625, ENST00000491749_5end |
EntrezGene: | EFHC1 |
HGNC: | 16406 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.73e-08 | 25 |
fibroblast | 5.11e-07 | 76 |
neuron associated cell | 9.95e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 9.95e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.51e-11 | 89 |
central nervous system | 1.02e-10 | 81 |
ectoderm-derived structure | 3.13e-10 | 171 |
ectoderm | 3.13e-10 | 171 |
presumptive ectoderm | 3.13e-10 | 171 |
structure with developmental contribution from neural crest | 6.89e-10 | 132 |
brain | 1.29e-09 | 68 |
future brain | 1.29e-09 | 68 |
neurectoderm | 5.62e-08 | 86 |
neural plate | 5.80e-08 | 82 |
presumptive neural plate | 5.80e-08 | 82 |
pre-chordal neural plate | 1.44e-07 | 61 |
cell layer | 1.94e-07 | 309 |
epithelium | 2.42e-07 | 306 |
ecto-epithelium | 4.90e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.13e-10 | 27 |
cell type cancer | 1.45e-10 | 143 |
reproductive organ cancer | 2.92e-10 | 29 |
carcinoma | 2.64e-08 | 106 |
ovarian cancer | 3.74e-07 | 14 |
disease of cellular proliferation | 4.67e-07 | 239 |