FFCP PHASE1:Hg19::chr6:43752516..43752532,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7422 | |EntrezGene=7422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12680 | |HGNC=12680 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=216bp_to_AF024710_5end | |association_with_transcript=216bp_to_AF024710_5end | ||
|cluster_id=chr6:43752516..43752532,+ | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_4_at_VEGFA_5end | |description=CAGE_peak_4_at_VEGFA_5end | ||
|id=chr6:43752516..43752532,+ | |id=chr6:43752516..43752532,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000134;2.68e-07;55 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.57e-09!14;DOID:193!1.52e-07!29;DOID:120!1.63e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.17e-15;14!DOID:120;2.24e-10;27!DOID:193;2.63e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.67e-16,14;DOID:120,5.67e-11,27;DOID:193,7.54e-10,29 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.36e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.67e-08,13;UBERON:0002118,9.86e-07,5 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.422863212287913,0,1.34088328328186,0,0,0,0.261185628199839,0.491467873003018,0,0,0.263766978228454,0.247532705920093,0,3.36162573225888,1.20538905604795,1.46062018077475,0.487932798790507,0.123121058076788,0,0.313454721478088,0.85870796139317,0,0.376627918784408,0.458480434487708,0.164201178899891,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0,0,0,0.710846162437108,0,1.66198622559563,0.601633342410425,0.868043482863407,0,0,0,0.726991193897824,0,0,0.697287110717054,1.23350366406548,1.85823822537062,0.863077176966451,1.2808035326455,0.47296445977717,0.344745680736619,0,0,4.1413314699373,1.63743690034707,0.898893937780338,4.59125838556354,2.24650318953266,1.91801137739712,0,0.598390972864896,0.426224750532694,3.48251086354301,0.56738522469114,1.86846674698672,0.75374599577023,0,0.868755378820466,0.605399502633369,1.47311054395026,0,0.211255286311942,0,0,0.336985893439485,1.05123824989054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.511450247374121,1.0843174571537,1.00267582127178,0.869079113764942,0.795285947051099,5.35298357332899,0.283604451492204,0.443458794925128,0.175669571386252,0.261958150995425,1.09288586487763,0.741568885568859,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,7.45457927542978,0.759783069987479,5.29636723252875,4.58938593198102,0,0,0,1.2333377420858,0,0.404132016209064,0.326923806226917,0.151357427644931,0,1.17160715916898,0,0.570471821544449,0.896692083310806,0.117434498643765,0.161872944368132,0.561803226808994,0.61246251376468,1.47401180774122,0.103325781175765,0,1.23633464639278,0,0,0.673344455816265,0.500474079487857,0,0,0.30648779579902,0.600952235626387,0.794025282120147,0.89694817844431,1.70845911054854,3.39091041855299,0,0.721367704669072,3.09168648054755,0.18611685633159,1.0126579934476,0.584622030967192,1.26216887122057,1.10459878370759,0.80823028409406,1.06502877754984,0.201504196455281,0.169560592310488,0.57978255948989,1.09098448236334,0,0,0.132529768321485,0.232387885739037,0.518305275076852,0,0,0,0,0,0,0,0.946454400318751,0.337169380156203,0.482022059766964,0.330881918197182,0.435758888184812,0.71181185733329,0.269662616320329,0.392442930250692,0,0,0,0,1.47008711385542,8.87285243752816,2.94848165003288,0,0,0.368965315629341,1.02940686179115,0.219500570817251,0,0.603173834469785,0.370353780634118,2.28065813717227,0,1.44331342025273,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.708875486211932,1.25381931783988,1.16253575405585,0.766765358330422,0,0.088048434013226,0.414656231081544,0.720599767084807,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0,0,0.22001485746285,1.68053230485111,0,1.690605505112,0.531876233169741,1.04007436911366,1.02882949704857,0,0.266422179016099,1.42977993658148,0,0,0,2.48774364119782,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0.479249710983165,0,1.42636905040718,1.01346914667305,0.821905290201534,0.358121926479791,0.112085143993527,0.394061520403854,0,0,0,0,0,0.167516265334349,0.637938751653163,1.49801404789436,0,0,0.12269149171914,0.500170521059677,0.813795071099207,1.45579603071565,1.78428988797162,0.157702415033935,1.28855556491985,0.300946099727719,0,0,0.664225598535437,0,0.434418072340414,0.391602314925481,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0.604780586659361,0.496215615637554,2.455391572609,0.841980283299221,1.53766979106841,0.511707249066704,2.0911009748669,1.48418066444991,1.69630663182921,0.710246901252508,0.739144404124282,0,0.929683027679674,0.241718899183244,2.20557117333613,3.31491560169227,0.918515585316854,0.910455840033585,0.262248829918848,0,1.15523005656622,0,1.46139224653261,0.422206515571503,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,1.01950509218015,0.831076008928724,0.895499018888713,0,0.261435451024901,0.256450125116389,0.328014645699706,0.976135183992909,0.618246069886334,0.54941678891006,0.82509499920588,0,0.650060246036521,0,2.22342652071881,0.462145851343933,0.15350367472613,0.827019434907183,0.214840489736547,0.145016693914229,0.681813019328807,0.178064071293475,3.47098322258054,0.960950336825531,4.33883222481586,2.32662895967765,1.85938219718914,5.03699754929024,0,1.23213432070436,0,0,0.55597265731176,0.286249773483982,0,0.316379424718726,0.38126038784765,0.511795582622668,0,0,0,0.179872457583315,0,0,0.202182481573316,0,1.26377536871694,0,2.68084838594413,0,0.818999468447914,1.41405431953713,0,1.10273068709225,1.32687795048244,1.31535265576129,0,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0.709522128141196,1.26664581178598,2.63435914367922,0.379473173765715,0.349934720244983,0.577332676353072,0,0,0.376575203107117,1.29151611801369,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,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|short_description=p4@VEGFA | |short_description=p4@VEGFA | ||
}} | }} |
Latest revision as of 23:02, 18 September 2015
Short description: | p4@VEGFA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VEGFA_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | 216bp_to_AF024710_5end |
EntrezGene: | VEGFA |
HGNC: | 12680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female gonad | 3.67e-08 | 13 |
right ovary | 9.86e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.67e-16 | 14 |
female reproductive organ cancer | 5.67e-11 | 27 |
reproductive organ cancer | 7.54e-10 | 29 |